RNA–Protein interactions for RNA: ENST00000409208.5

FOXP4-205, Transcript of forkhead box P4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FOXP4, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-205ENST00000409208 NISCHQ9Y2I1 1504 aa37■■■■□ 3.51
FOXP4-205ENST00000409208 SHROOM4Q9ULL8 1493 aa33.71■■■□□ 2.99
FOXP4-205ENST00000409208 SUPT5HO00267 1087 aaKnown RBP33.42■■■□□ 2.94
FOXP4-205ENST00000409208 DCAF8L2P0C7V8 631 aa32.8■■■□□ 2.84
FOXP4-205ENST00000409208 PCGF6Q9BYE7 350 aa32.2■■■□□ 2.75
FOXP4-205ENST00000409208 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
FOXP4-205ENST00000409208 PPARGC1BQ86YN6 1023 aaKnown RBP31.91■■■□□ 2.7
FOXP4-205ENST00000409208 HRCP23327 699 aa31.88■■■□□ 2.69
FOXP4-205ENST00000409208 MYO15BQ96JP2 1530 aa31.73■■■□□ 2.67
FOXP4-205ENST00000409208 LOC105371045A0A1W2PR82 267 aa31.64■■■□□ 2.66
FOXP4-205ENST00000409208 EHMT2Q96KQ7 1210 aa31.5■■■□□ 2.63
FOXP4-205ENST00000409208 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
FOXP4-205ENST00000409208 FAM9AQ8IZU1 332 aaPredicted RBP31.15■■■□□ 2.58
FOXP4-205ENST00000409208 TRIM26Q12899 539 aaPredicted RBP30.77■■■□□ 2.52
FOXP4-205ENST00000409208 TRIM41Q8WV44 630 aa30.63■■■□□ 2.49
FOXP4-205ENST00000409208 TTBK1Q5TCY1 1321 aaPredicted RBP30.49■■■□□ 2.47
FOXP4-205ENST00000409208 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
FOXP4-205ENST00000409208 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
FOXP4-205ENST00000409208 ZEB1P37275 1124 aaPredicted RBP30.11■■■□□ 2.41
FOXP4-205ENST00000409208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.09■■■□□ 2.41
FOXP4-205ENST00000409208 SCAF1Q9H7N4 1312 aaKnown RBP29.98■■■□□ 2.39
FOXP4-205ENST00000409208 CCER1Q8TC90 406 aaPredicted RBP29.98■■■□□ 2.39
FOXP4-205ENST00000409208 SCRIBQ14160 1630 aa29.85■■■□□ 2.37
FOXP4-205ENST00000409208 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
FOXP4-205ENST00000409208 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
FOXP4-205ENST00000409208 YTHDC1Q96MU7 727 aaKnown RBP29.56■■■□□ 2.32
FOXP4-205ENST00000409208 NEUROD1Q13562 356 aa29.53■■■□□ 2.32
FOXP4-205ENST00000409208 ABCC9O60706 1549 aa29.48■■■□□ 2.31
FOXP4-205ENST00000409208 PELP1Q8IZL8 1130 aaKnown RBP29.47■■■□□ 2.31
FOXP4-205ENST00000409208 RANGAP1P46060 587 aaPredicted RBP29.46■■■□□ 2.31
FOXP4-205ENST00000409208 DIEXFQ68CQ4 756 aaKnown RBP29.46■■■□□ 2.31
FOXP4-205ENST00000409208 GTF3C3Q9Y5Q9 886 aa29.42■■■□□ 2.3
FOXP4-205ENST00000409208 CECR2Q9BXF3 1484 aa29.4■■■□□ 2.3
FOXP4-205ENST00000409208 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
FOXP4-205ENST00000409208 ACIN1Q9UKV3 1341 aaKnown RBP29.37■■■□□ 2.29
FOXP4-205ENST00000409208 CENPBP07199 599 aaPredicted RBP29.26■■■□□ 2.27
FOXP4-205ENST00000409208 HNRNPUL2Q1KMD3 747 aaKnown RBP29.22■■■□□ 2.27
FOXP4-205ENST00000409208 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
FOXP4-205ENST00000409208 WIZO95785 1651 aa28.94■■■□□ 2.22
FOXP4-205ENST00000409208 ZNF316A6NFI3 1004 aaPredicted RBP28.86■■■□□ 2.21
FOXP4-205ENST00000409208 ABCC8Q09428 1581 aa28.85■■■□□ 2.21
FOXP4-205ENST00000409208 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
FOXP4-205ENST00000409208 SOGA1O94964 1423 aa28.81■■■□□ 2.2
FOXP4-205ENST00000409208 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
FOXP4-205ENST00000409208 CCDC88BA6NC98 1476 aa28.8■■■□□ 2.2
FOXP4-205ENST00000409208 MIER1Q8N108 512 aa28.79■■■□□ 2.2
FOXP4-205ENST00000409208 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
FOXP4-205ENST00000409208 APLP2Q06481 763 aa28.78■■■□□ 2.2
FOXP4-205ENST00000409208 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.18
FOXP4-205ENST00000409208 ITGAEP38570 1179 aa28.54■■■□□ 2.16
FOXP4-205ENST00000409208 TNIKQ9UKE5 1360 aa28.42■■■□□ 2.14
FOXP4-205ENST00000409208 NACADO15069 1562 aa28.4■■■□□ 2.14
FOXP4-205ENST00000409208 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
FOXP4-205ENST00000409208 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.12
FOXP4-205ENST00000409208 CLIP1P30622 1438 aa28.21■■■□□ 2.11
FOXP4-205ENST00000409208 GOLGA3Q08378 1498 aa28.19■■■□□ 2.1
FOXP4-205ENST00000409208 BCANQ96GW7 911 aa28.17■■■□□ 2.1
FOXP4-205ENST00000409208 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
FOXP4-205ENST00000409208 ATP1B4Q9UN42 357 aaPredicted RBP28.09■■■□□ 2.09
FOXP4-205ENST00000409208 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
FOXP4-205ENST00000409208 KANK4Q5T7N3 995 aaPredicted RBP28■■■□□ 2.07
FOXP4-205ENST00000409208 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
FOXP4-205ENST00000409208 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
FOXP4-205ENST00000409208 EEA1Q15075 1411 aa27.98■■■□□ 2.07
FOXP4-205ENST00000409208 KCNH8Q96L42 1107 aa27.95■■■□□ 2.07
FOXP4-205ENST00000409208 MYT1Q01538 1121 aa27.95■■■□□ 2.06
FOXP4-205ENST00000409208 HIRIP3Q9BW71 556 aaPredicted RBP27.93■■■□□ 2.06
FOXP4-205ENST00000409208 RAPGEF2Q9Y4G8 1499 aa27.92■■■□□ 2.06
FOXP4-205ENST00000409208 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
FOXP4-205ENST00000409208 SUPT16HQ9Y5B9 1047 aaKnown RBP27.9■■■□□ 2.06
FOXP4-205ENST00000409208 VPS8Q8N3P4 1428 aa27.86■■■□□ 2.05
FOXP4-205ENST00000409208 P3H3Q8IVL6 736 aa27.79■■■□□ 2.04
FOXP4-205ENST00000409208 DDX10Q13206 875 aaKnown RBP27.78■■■□□ 2.04
FOXP4-205ENST00000409208 FAM50AQ14320 339 aaKnown RBP27.77■■■□□ 2.04
FOXP4-205ENST00000409208 SYNJ1O43426 1573 aa27.72■■■□□ 2.03
FOXP4-205ENST00000409208 DHX57Q6P158 1386 aaKnown RBP27.72■■■□□ 2.03
FOXP4-205ENST00000409208 FKBP8Q14318 412 aa27.67■■■□□ 2.02
FOXP4-205ENST00000409208 SIN3AQ96ST3 1273 aa27.67■■■□□ 2.02
FOXP4-205ENST00000409208 TRIM52Q96A61 297 aa27.65■■■□□ 2.02
FOXP4-205ENST00000409208 TSHZ2Q9NRE2 1034 aa27.57■■■□□ 2
FOXP4-205ENST00000409208 KIF21BO75037 1637 aa27.57■■■□□ 2
FOXP4-205ENST00000409208 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
FOXP4-205ENST00000409208 NEFLP07196 543 aa27.48■■□□□ 1.99
FOXP4-205ENST00000409208 CCNB3Q8WWL7 1395 aa27.42■■□□□ 1.98
FOXP4-205ENST00000409208 CNGB1Q14028 1251 aaPredicted RBP27.42■■□□□ 1.98
FOXP4-205ENST00000409208 IRX6P78412 446 aaPredicted RBP27.4■■□□□ 1.98
FOXP4-205ENST00000409208 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
FOXP4-205ENST00000409208 RAB3GAP2Q9H2M9 1393 aa27.37■■□□□ 1.97
FOXP4-205ENST00000409208 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
FOXP4-205ENST00000409208 ARAP1Q96P48 1450 aa27.36■■□□□ 1.97
FOXP4-205ENST00000409208 CLSPNQ9HAW4 1339 aa27.35■■□□□ 1.97
FOXP4-205ENST00000409208 ANP32CO43423 234 aa27.28■■□□□ 1.96
FOXP4-205ENST00000409208 ANP32EQ9BTT0 268 aa27.26■■□□□ 1.95
FOXP4-205ENST00000409208 KIF27Q86VH2 1401 aa27.21■■□□□ 1.95
FOXP4-205ENST00000409208 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
FOXP4-205ENST00000409208 ARID3CA6NKF2 412 aa27.16■■□□□ 1.94
FOXP4-205ENST00000409208 HNRNPUQ00839 825 aaKnown RBP eCLIP27.12■■□□□ 1.936e-7■■□□□ 14.5
FOXP4-205ENST00000409208 SENP3-EIF4A1A0A087X0R7 540 aa27.11■■□□□ 1.93
FOXP4-205ENST00000409208 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
FOXP4-205ENST00000409208 RBM19Q9Y4C8 960 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms