RNA–Protein interactions for RNA: ENST00000531690.5

GMDS-209, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-209ENST00000531690 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
GMDS-209ENST00000531690 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
GMDS-209ENST00000531690 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
GMDS-209ENST00000531690 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
GMDS-209ENST00000531690 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
GMDS-209ENST00000531690 CCDC180Q9P1Z9 1646 aa12.34□□□□□ -0.43
GMDS-209ENST00000531690 PLPPR3Q6T4P5 718 aa11.92□□□□□ -0.5
GMDS-209ENST00000531690 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
GMDS-209ENST00000531690 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
GMDS-209ENST00000531690 FOXD1Q16676 465 aa11.7□□□□□ -0.54
GMDS-209ENST00000531690 DCAF8L2P0C7V8 631 aa11.57□□□□□ -0.56
GMDS-209ENST00000531690 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
GMDS-209ENST00000531690 MYO15BQ96JP2 1530 aa11.52□□□□□ -0.57
GMDS-209ENST00000531690 NACADO15069 1562 aa11.41□□□□□ -0.58
GMDS-209ENST00000531690 ABCC9O60706 1549 aa11.41□□□□□ -0.58
GMDS-209ENST00000531690 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
GMDS-209ENST00000531690 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
GMDS-209ENST00000531690 ADRA2BP18089 450 aa11.31□□□□□ -0.6
GMDS-209ENST00000531690 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
GMDS-209ENST00000531690 SUPT5HO00267 1087 aaKnown RBP11.21□□□□□ -0.61
GMDS-209ENST00000531690 PIAS4Q8N2W9 510 aaPredicted RBP11.04□□□□□ -0.64
GMDS-209ENST00000531690 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
GMDS-209ENST00000531690 RSF1Q96T23 1441 aaPredicted RBP10.95□□□□□ -0.66
GMDS-209ENST00000531690 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
GMDS-209ENST00000531690 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
GMDS-209ENST00000531690 MROH2BQ7Z745 1585 aa10.86□□□□□ -0.67
GMDS-209ENST00000531690 SMARCA4P51532 1647 aa10.85□□□□□ -0.67
GMDS-209ENST00000531690 BICRAQ9NZM4 1560 aa10.83□□□□□ -0.68
GMDS-209ENST00000531690 WIZO95785 1651 aa10.82□□□□□ -0.68
GMDS-209ENST00000531690 TOP2AP11388 1531 aaKnown RBP10.77□□□□□ -0.69
GMDS-209ENST00000531690 MSH5O43196 834 aa10.76□□□□□ -0.69
GMDS-209ENST00000531690 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
GMDS-209ENST00000531690 PEG3Q9GZU2 1588 aa10.7□□□□□ -0.7
GMDS-209ENST00000531690 SMARCA2P51531 1590 aa10.67□□□□□ -0.7
GMDS-209ENST00000531690 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
GMDS-209ENST00000531690 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
GMDS-209ENST00000531690 CCDC88BA6NC98 1476 aa10.58□□□□□ -0.72
GMDS-209ENST00000531690 ATAD2BQ9ULI0 1458 aa10.58□□□□□ -0.72
GMDS-209ENST00000531690 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
GMDS-209ENST00000531690 HMGXB3Q12766 1538 aa10.53□□□□□ -0.72
GMDS-209ENST00000531690 PPP4R3CPQ6ZMV5 832 aa10.51□□□□□ -0.73
GMDS-209ENST00000531690 NCAPD3P42695 1498 aa10.46□□□□□ -0.74
GMDS-209ENST00000531690 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
GMDS-209ENST00000531690 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
GMDS-209ENST00000531690 EEA1Q15075 1411 aa10.38□□□□□ -0.75
GMDS-209ENST00000531690 KCNA4P22459 653 aa10.37□□□□□ -0.75
GMDS-209ENST00000531690 WRNQ14191 1432 aaPredicted RBP eCLIP10.37□□□□□ -0.75
GMDS-209ENST00000531690 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
GMDS-209ENST00000531690 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
GMDS-209ENST00000531690 FAM9AQ8IZU1 332 aaPredicted RBP10.33□□□□□ -0.76
GMDS-209ENST00000531690 LOC105371045A0A1W2PR82 267 aa10.32□□□□□ -0.76
GMDS-209ENST00000531690 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
GMDS-209ENST00000531690 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
GMDS-209ENST00000531690 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
GMDS-209ENST00000531690 CFTRP13569 1480 aa10.28□□□□□ -0.76
GMDS-209ENST00000531690 NCBP3Q53F19 620 aaKnown RBP10.26□□□□□ -0.77
GMDS-209ENST00000531690 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
GMDS-209ENST00000531690 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
GMDS-209ENST00000531690 SOGA1O94964 1423 aa10.22□□□□□ -0.77
GMDS-209ENST00000531690 KIF21BO75037 1637 aa10.22□□□□□ -0.77
GMDS-209ENST00000531690 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.78
GMDS-209ENST00000531690 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
GMDS-209ENST00000531690 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
GMDS-209ENST00000531690 CSRNP3Q8WYN3 585 aa10.19□□□□□ -0.78
GMDS-209ENST00000531690 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
GMDS-209ENST00000531690 LAMC3Q9Y6N6 1575 aa10.17□□□□□ -0.78
GMDS-209ENST00000531690 CUX1P39880 1505 aa10.17□□□□□ -0.78
GMDS-209ENST00000531690 TNIKQ9UKE5 1360 aa10.15□□□□□ -0.78
GMDS-209ENST00000531690 CEP162Q5TB80 1403 aa10.13□□□□□ -0.79
GMDS-209ENST00000531690 KIF27Q86VH2 1401 aa10.13□□□□□ -0.79
GMDS-209ENST00000531690 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
GMDS-209ENST00000531690 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
GMDS-209ENST00000531690 NPM3O75607 178 aaKnown RBP10.12□□□□□ -0.79
GMDS-209ENST00000531690 UBTFP17480 764 aaKnown RBP10.12□□□□□ -0.79
GMDS-209ENST00000531690 ERICH3Q5RHP9 1530 aa10.12□□□□□ -0.79
GMDS-209ENST00000531690 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
GMDS-209ENST00000531690 TRIM26Q12899 539 aaPredicted RBP10.11□□□□□ -0.79
GMDS-209ENST00000531690 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
GMDS-209ENST00000531690 DMRT2Q9Y5R5 561 aa10.1□□□□□ -0.79
GMDS-209ENST00000531690 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
GMDS-209ENST00000531690 FGD5Q6ZNL6 1462 aa10.06□□□□□ -0.8
GMDS-209ENST00000531690 CUX2O14529 1486 aa10.04□□□□□ -0.8
GMDS-209ENST00000531690 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
GMDS-209ENST00000531690 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
GMDS-209ENST00000531690 CLIP1P30622 1438 aa10.03□□□□□ -0.8
GMDS-209ENST00000531690 TOPBP1Q92547 1522 aa10.02□□□□□ -0.8
GMDS-209ENST00000531690 NESP48681 1621 aa10.02□□□□□ -0.81
GMDS-209ENST00000531690 KIF21AQ7Z4S6 1674 aa10□□□□□ -0.81
GMDS-209ENST00000531690 CUL7Q14999 1698 aa9.99□□□□□ -0.81
GMDS-209ENST00000531690 ABCA10Q8WWZ4 1543 aa9.99□□□□□ -0.81
GMDS-209ENST00000531690 RNF216Q9NWF9 866 aaPredicted RBP9.99□□□□□ -0.81
GMDS-209ENST00000531690 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
GMDS-209ENST00000531690 WDR97A6NE52 1622 aa9.97□□□□□ -0.81
GMDS-209ENST00000531690 VPS8Q8N3P4 1428 aa9.97□□□□□ -0.81
GMDS-209ENST00000531690 HRCP23327 699 aa9.95□□□□□ -0.82
GMDS-209ENST00000531690 APLP2Q06481 763 aa9.95□□□□□ -0.82
GMDS-209ENST00000531690 URB2Q14146 1524 aaKnown RBP9.94□□□□□ -0.82
GMDS-209ENST00000531690 HOXD11P31277 338 aaPredicted RBP9.93□□□□□ -0.82
GMDS-209ENST00000531690 MRC2Q9UBG0 1479 aa9.92□□□□□ -0.82
GMDS-209ENST00000531690 CARMIL1Q5VZK9 1371 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms