RNA–Protein interactions for RNA: ENST00000418458.5

GNL3-202, Transcript of G protein nucleolar 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GNL3, Length 2,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-202ENST00000418458 NISCHQ9Y2I1 1504 aa26.99■■□□□ 1.91
GNL3-202ENST00000418458 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
GNL3-202ENST00000418458 ZCCHC6Q5VYS8 1495 aaKnown RBP22.7■■□□□ 1.22
GNL3-202ENST00000418458 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
GNL3-202ENST00000418458 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
GNL3-202ENST00000418458 SHROOM4Q9ULL8 1493 aa22.23■■□□□ 1.15
GNL3-202ENST00000418458 ABCC9O60706 1549 aa22.19■■□□□ 1.14
GNL3-202ENST00000418458 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
GNL3-202ENST00000418458 NACADO15069 1562 aa21.82■■□□□ 1.08
GNL3-202ENST00000418458 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
GNL3-202ENST00000418458 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.06
GNL3-202ENST00000418458 SUPT5HO00267 1087 aaKnown RBP21.41■■□□□ 1.02
GNL3-202ENST00000418458 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
GNL3-202ENST00000418458 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
GNL3-202ENST00000418458 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
GNL3-202ENST00000418458 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
GNL3-202ENST00000418458 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
GNL3-202ENST00000418458 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
GNL3-202ENST00000418458 BAZ1AQ9NRL2 1556 aaPredicted RBP20.83■□□□□ 0.93
GNL3-202ENST00000418458 WIZO95785 1651 aa20.79■□□□□ 0.92
GNL3-202ENST00000418458 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
GNL3-202ENST00000418458 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
GNL3-202ENST00000418458 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
GNL3-202ENST00000418458 PEG3Q9GZU2 1588 aa20.44■□□□□ 0.86
GNL3-202ENST00000418458 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
GNL3-202ENST00000418458 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
GNL3-202ENST00000418458 SMARCA2P51531 1590 aa20.34■□□□□ 0.85
GNL3-202ENST00000418458 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
GNL3-202ENST00000418458 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
GNL3-202ENST00000418458 HMGXB3Q12766 1538 aa20.13■□□□□ 0.81
GNL3-202ENST00000418458 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
GNL3-202ENST00000418458 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
GNL3-202ENST00000418458 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
GNL3-202ENST00000418458 ABCC8Q09428 1581 aa19.98■□□□□ 0.79
GNL3-202ENST00000418458 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
GNL3-202ENST00000418458 LOC105371045A0A1W2PR82 267 aa19.77■□□□□ 0.76
GNL3-202ENST00000418458 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
GNL3-202ENST00000418458 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
GNL3-202ENST00000418458 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
GNL3-202ENST00000418458 CFTRP13569 1480 aa19.72■□□□□ 0.75
GNL3-202ENST00000418458 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
GNL3-202ENST00000418458 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
GNL3-202ENST00000418458 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
GNL3-202ENST00000418458 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.73
GNL3-202ENST00000418458 SOGA1O94964 1423 aa19.58■□□□□ 0.72
GNL3-202ENST00000418458 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
GNL3-202ENST00000418458 CUX1P39880 1505 aa19.53■□□□□ 0.72
GNL3-202ENST00000418458 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
GNL3-202ENST00000418458 NESP48681 1621 aa19.52■□□□□ 0.72
GNL3-202ENST00000418458 EEA1Q15075 1411 aa19.47■□□□□ 0.71
GNL3-202ENST00000418458 LAMC3Q9Y6N6 1575 aa19.46■□□□□ 0.71
GNL3-202ENST00000418458 FANCD2Q9BXW9 1451 aa19.46■□□□□ 0.71
GNL3-202ENST00000418458 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
GNL3-202ENST00000418458 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.69
GNL3-202ENST00000418458 CEP164Q9UPV0 1460 aa19.33■□□□□ 0.68
GNL3-202ENST00000418458 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
GNL3-202ENST00000418458 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
GNL3-202ENST00000418458 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
GNL3-202ENST00000418458 KIF21BO75037 1637 aa19.28■□□□□ 0.68
GNL3-202ENST00000418458 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
GNL3-202ENST00000418458 TOPBP1Q92547 1522 aa19.27■□□□□ 0.67
GNL3-202ENST00000418458 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
GNL3-202ENST00000418458 URB2Q14146 1524 aaKnown RBP19.22■□□□□ 0.67
GNL3-202ENST00000418458 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
GNL3-202ENST00000418458 TNIKQ9UKE5 1360 aa19.2■□□□□ 0.66
GNL3-202ENST00000418458 CUX2O14529 1486 aa19.2■□□□□ 0.66
GNL3-202ENST00000418458 POLA1P09884 1462 aaPredicted RBP19.18■□□□□ 0.66
GNL3-202ENST00000418458 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
GNL3-202ENST00000418458 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
GNL3-202ENST00000418458 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
GNL3-202ENST00000418458 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
GNL3-202ENST00000418458 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
GNL3-202ENST00000418458 WDR97A6NE52 1622 aa19.09■□□□□ 0.65
GNL3-202ENST00000418458 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
GNL3-202ENST00000418458 MRC2Q9UBG0 1479 aa19.06■□□□□ 0.64
GNL3-202ENST00000418458 IGF1RP08069 1367 aa19.04■□□□□ 0.64
GNL3-202ENST00000418458 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
GNL3-202ENST00000418458 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
GNL3-202ENST00000418458 CLIP1P30622 1438 aa18.97■□□□□ 0.63
GNL3-202ENST00000418458 PCGF6Q9BYE7 350 aa18.97■□□□□ 0.63
GNL3-202ENST00000418458 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
GNL3-202ENST00000418458 CARMIL1Q5VZK9 1371 aa18.97■□□□□ 0.63
GNL3-202ENST00000418458 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
GNL3-202ENST00000418458 WDR62O43379 1518 aa18.95■□□□□ 0.62
GNL3-202ENST00000418458 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
GNL3-202ENST00000418458 CUL7Q14999 1698 aa18.93■□□□□ 0.62
GNL3-202ENST00000418458 THOC2Q8NI27 1593 aaKnown RBP18.92■□□□□ 0.62
GNL3-202ENST00000418458 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
GNL3-202ENST00000418458 PPARGC1BQ86YN6 1023 aaKnown RBP18.9■□□□□ 0.62
GNL3-202ENST00000418458 PBRM1Q86U86 1689 aa18.88■□□□□ 0.61
GNL3-202ENST00000418458 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
GNL3-202ENST00000418458 IFT140Q96RY7 1462 aa18.83■□□□□ 0.6
GNL3-202ENST00000418458 VPS8Q8N3P4 1428 aa18.8■□□□□ 0.6
GNL3-202ENST00000418458 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.69e-7■■■□□ 18.4
GNL3-202ENST00000418458 CTTNBP2Q8WZ74 1663 aa18.8■□□□□ 0.6
GNL3-202ENST00000418458 ARAP1Q96P48 1450 aa18.79■□□□□ 0.6
GNL3-202ENST00000418458 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
GNL3-202ENST00000418458 ARHGAP35Q9NRY4 1499 aa18.76■□□□□ 0.59
GNL3-202ENST00000418458 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
GNL3-202ENST00000418458 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms