RNA–Protein interactions for RNA: ENST00000426523.5

ARAP1-205, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARAP1, Length 4,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-205ENST00000426523 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
ARAP1-205ENST00000426523 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
ARAP1-205ENST00000426523 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
ARAP1-205ENST00000426523 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
ARAP1-205ENST00000426523 ABCC9O60706 1549 aa18.26■□□□□ 0.51
ARAP1-205ENST00000426523 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
ARAP1-205ENST00000426523 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
ARAP1-205ENST00000426523 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
ARAP1-205ENST00000426523 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
ARAP1-205ENST00000426523 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
ARAP1-205ENST00000426523 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.441e-6■■□□□ 11.5
ARAP1-205ENST00000426523 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
ARAP1-205ENST00000426523 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
ARAP1-205ENST00000426523 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
ARAP1-205ENST00000426523 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
ARAP1-205ENST00000426523 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
ARAP1-205ENST00000426523 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
ARAP1-205ENST00000426523 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
ARAP1-205ENST00000426523 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
ARAP1-205ENST00000426523 APLP2Q06481 763 aa17.37■□□□□ 0.37
ARAP1-205ENST00000426523 NACADO15069 1562 aa17.32■□□□□ 0.36
ARAP1-205ENST00000426523 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ARAP1-205ENST00000426523 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
ARAP1-205ENST00000426523 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
ARAP1-205ENST00000426523 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
ARAP1-205ENST00000426523 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
ARAP1-205ENST00000426523 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
ARAP1-205ENST00000426523 MYO15BQ96JP2 1530 aa16.97■□□□□ 0.31
ARAP1-205ENST00000426523 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
ARAP1-205ENST00000426523 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
ARAP1-205ENST00000426523 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
ARAP1-205ENST00000426523 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
ARAP1-205ENST00000426523 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
ARAP1-205ENST00000426523 HRCP23327 699 aa16.71■□□□□ 0.27
ARAP1-205ENST00000426523 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
ARAP1-205ENST00000426523 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
ARAP1-205ENST00000426523 ITGAEP38570 1179 aa16.63■□□□□ 0.25
ARAP1-205ENST00000426523 WIZO95785 1651 aa16.6■□□□□ 0.25
ARAP1-205ENST00000426523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
ARAP1-205ENST00000426523 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
ARAP1-205ENST00000426523 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.243e-14■■■■□ 23.5
ARAP1-205ENST00000426523 P3H3Q8IVL6 736 aa16.48■□□□□ 0.23
ARAP1-205ENST00000426523 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
ARAP1-205ENST00000426523 FBLN2P98095 1184 aa16.43■□□□□ 0.22
ARAP1-205ENST00000426523 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
ARAP1-205ENST00000426523 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
ARAP1-205ENST00000426523 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
ARAP1-205ENST00000426523 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
ARAP1-205ENST00000426523 EEA1Q15075 1411 aa16.37■□□□□ 0.21
ARAP1-205ENST00000426523 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
ARAP1-205ENST00000426523 SOGA1O94964 1423 aa16.34■□□□□ 0.21
ARAP1-205ENST00000426523 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
ARAP1-205ENST00000426523 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
ARAP1-205ENST00000426523 CLIP1P30622 1438 aa16.27■□□□□ 0.2
ARAP1-205ENST00000426523 ARID3CA6NKF2 412 aa16.27■□□□□ 0.19
ARAP1-205ENST00000426523 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
ARAP1-205ENST00000426523 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
ARAP1-205ENST00000426523 CEP164Q9UPV0 1460 aa16.2■□□□□ 0.18
ARAP1-205ENST00000426523 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
ARAP1-205ENST00000426523 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
ARAP1-205ENST00000426523 CUX2O14529 1486 aa16.11■□□□□ 0.17
ARAP1-205ENST00000426523 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
ARAP1-205ENST00000426523 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
ARAP1-205ENST00000426523 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
ARAP1-205ENST00000426523 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
ARAP1-205ENST00000426523 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
ARAP1-205ENST00000426523 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
ARAP1-205ENST00000426523 CHMP7Q8WUX9 453 aaPredicted RBP16.06■□□□□ 0.16
ARAP1-205ENST00000426523 NEUROD1Q13562 356 aa16.06■□□□□ 0.16
ARAP1-205ENST00000426523 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
ARAP1-205ENST00000426523 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
ARAP1-205ENST00000426523 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
ARAP1-205ENST00000426523 ERCC6Q03468 1493 aa16■□□□□ 0.15
ARAP1-205ENST00000426523 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
ARAP1-205ENST00000426523 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
ARAP1-205ENST00000426523 ZNF777Q9ULD5 760 aaPredicted RBP15.97■□□□□ 0.15
ARAP1-205ENST00000426523 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
ARAP1-205ENST00000426523 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
ARAP1-205ENST00000426523 MTUS2Q5JR59 1369 aa15.95■□□□□ 0.14
ARAP1-205ENST00000426523 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
ARAP1-205ENST00000426523 RAPGEF2Q9Y4G8 1499 aa15.91■□□□□ 0.14
ARAP1-205ENST00000426523 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
ARAP1-205ENST00000426523 VPS8Q8N3P4 1428 aa15.87■□□□□ 0.13
ARAP1-205ENST00000426523 CHIC2Q9UKJ5 165 aa15.87■□□□□ 0.13
ARAP1-205ENST00000426523 ZNF316A6NFI3 1004 aaPredicted RBP15.86■□□□□ 0.13
ARAP1-205ENST00000426523 PELP1Q8IZL8 1130 aaKnown RBP15.83■□□□□ 0.12
ARAP1-205ENST00000426523 CFTRP13569 1480 aa15.82■□□□□ 0.12
ARAP1-205ENST00000426523 CC2D2AQ9P2K1 1620 aa15.82■□□□□ 0.12
ARAP1-205ENST00000426523 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
ARAP1-205ENST00000426523 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
ARAP1-205ENST00000426523 KANK4Q5T7N3 995 aaPredicted RBP15.8■□□□□ 0.12
ARAP1-205ENST00000426523 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
ARAP1-205ENST00000426523 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
ARAP1-205ENST00000426523 FHAD1B1AJZ9 1412 aa15.78■□□□□ 0.12
ARAP1-205ENST00000426523 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.11
ARAP1-205ENST00000426523 NESP48681 1621 aa15.75■□□□□ 0.11
ARAP1-205ENST00000426523 IGF1RP08069 1367 aa15.74■□□□□ 0.11
ARAP1-205ENST00000426523 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
ARAP1-205ENST00000426523 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
ARAP1-205ENST00000426523 PEG3Q9GZU2 1588 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms