Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.52■■□□□ 1.84
DDX4Q9NQI0 AL358852.1-201ENST00000623174 1268 ntBASIC26.52■■□□□ 1.84
DDX4Q9NQI0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.51■■□□□ 1.83
DDX4Q9NQI0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 AC079630.1-202ENST00000618127 1840 ntBASIC26.5■■□□□ 1.83
DDX4Q9NQI0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.5■■□□□ 1.83
DDX4Q9NQI0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 KRT18P5-201ENST00000436075 1291 ntBASIC26.49■■□□□ 1.83
DDX4Q9NQI0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.49■■□□□ 1.83
DDX4Q9NQI0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX4Q9NQI0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 ABCB10P4-201ENST00000566803 2184 ntBASIC26.47■■□□□ 1.83
DDX4Q9NQI0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 IKBKGP1-201ENST00000612193 1073 ntBASIC26.47■■□□□ 1.83
DDX4Q9NQI0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
DDX4Q9NQI0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX4Q9NQI0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX4Q9NQI0 AC123595.1-201ENST00000440769 1046 ntBASIC26.46■■□□□ 1.83
DDX4Q9NQI0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.46■■□□□ 1.83
DDX4Q9NQI0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.46■■□□□ 1.83
DDX4Q9NQI0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.46■■□□□ 1.83
DDX4Q9NQI0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.46■■□□□ 1.83
DDX4Q9NQI0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
DDX4Q9NQI0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 AP005435.1-201ENST00000529293 1178 ntBASIC26.45■■□□□ 1.82
DDX4Q9NQI0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 AL354811.1-201ENST00000610286 706 ntBASIC26.45■■□□□ 1.82
DDX4Q9NQI0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.45■■□□□ 1.82
DDX4Q9NQI0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
DDX4Q9NQI0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX4Q9NQI0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
DDX4Q9NQI0 CCDC92B-201ENST00000575506 885 ntBASIC26.43■■□□□ 1.82
DDX4Q9NQI0 AC022517.1-201ENST00000592429 346 ntBASIC26.43■■□□□ 1.82
DDX4Q9NQI0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
DDX4Q9NQI0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
DDX4Q9NQI0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX4Q9NQI0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX4Q9NQI0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
DDX4Q9NQI0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms