RNA–Protein interactions for RNA: ENST00000356762.7

CRB3-202, Transcript of crumbs 3, cell polarity complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CRB3, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3-202ENST00000356762 NISCHQ9Y2I1 1504 aa53.2■■■■■ 6.11
CRB3-202ENST00000356762 CCDC180Q9P1Z9 1646 aa47.47■■■■■ 5.19
CRB3-202ENST00000356762 ABCC9O60706 1549 aa46.72■■■■■ 5.07
CRB3-202ENST00000356762 RB1CC1Q8TDY2 1594 aa44.88■■■■■ 4.78
CRB3-202ENST00000356762 NACADO15069 1562 aa44.78■■■■■ 4.76
CRB3-202ENST00000356762 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
CRB3-202ENST00000356762 MYO15BQ96JP2 1530 aa44.49■■■■■ 4.71
CRB3-202ENST00000356762 ZCCHC6Q5VYS8 1495 aaKnown RBP44.21■■■■■ 4.67
CRB3-202ENST00000356762 DCAF1Q9Y4B6 1507 aa44.1■■■■■ 4.65
CRB3-202ENST00000356762 UNC13AQ9UPW8 1703 aa43.75■■■■■ 4.59
CRB3-202ENST00000356762 PABPN1Q86U42 306 aaKnown RBP eCLIP43.6■■■■■ 4.57
CRB3-202ENST00000356762 BICRAQ9NZM4 1560 aa43.5■■■■■ 4.55
CRB3-202ENST00000356762 DNAJC5BQ9UF47 199 aa43.33■■■■■ 4.53
CRB3-202ENST00000356762 SHROOM4Q9ULL8 1493 aa43.16■■■■■ 4.5
CRB3-202ENST00000356762 SCRIBQ14160 1630 aa43.11■■■■■ 4.49
CRB3-202ENST00000356762 EIF4G1Q04637 1599 aaKnown RBP42.38■■■■■ 4.37
CRB3-202ENST00000356762 CC2D2AQ9P2K1 1620 aa42.29■■■■■ 4.36
CRB3-202ENST00000356762 CECR2Q9BXF3 1484 aa42.09■■■■■ 4.33
CRB3-202ENST00000356762 NCAPD3P42695 1498 aa41.36■■■■■ 4.21
CRB3-202ENST00000356762 SMARCA4P51532 1647 aa41.31■■■■■ 4.2
CRB3-202ENST00000356762 BAZ1AQ9NRL2 1556 aaPredicted RBP41.26■■■■■ 4.2
CRB3-202ENST00000356762 ATAD2BQ9ULI0 1458 aa41.24■■■■■ 4.19
CRB3-202ENST00000356762 SMARCA2P51531 1590 aa41.2■■■■■ 4.19
CRB3-202ENST00000356762 HMGXB3Q12766 1538 aa41.06■■■■■ 4.16
CRB3-202ENST00000356762 PEG3Q9GZU2 1588 aa41.02■■■■■ 4.16
CRB3-202ENST00000356762 MROH2BQ7Z745 1585 aa40.93■■■■■ 4.14
CRB3-202ENST00000356762 BAZ1BQ9UIG0 1483 aaKnown RBP40.83■■■■■ 4.13
CRB3-202ENST00000356762 WIZO95785 1651 aa40.43■■■■■ 4.06
CRB3-202ENST00000356762 RSF1Q96T23 1441 aaPredicted RBP40.37■■■■■ 4.05
CRB3-202ENST00000356762 ERCC6Q03468 1493 aa40.32■■■■■ 4.05
CRB3-202ENST00000356762 NESP48681 1621 aa40.31■■■■■ 4.04
CRB3-202ENST00000356762 LAMC3Q9Y6N6 1575 aa40.27■■■■■ 4.04
CRB3-202ENST00000356762 CUX2O14529 1486 aa40.17■■■■■ 4.02
CRB3-202ENST00000356762 CADPSQ9ULU8 1353 aa40.1■■■■■ 4.01
CRB3-202ENST00000356762 PDS5BQ9NTI5 1447 aa40.05■■■■■ 4
CRB3-202ENST00000356762 TOP2AP11388 1531 aaKnown RBP40.03■■■■■ 4
CRB3-202ENST00000356762 THOC2Q8NI27 1593 aaKnown RBP39.82■■■■□ 3.97
CRB3-202ENST00000356762 KIF21AQ7Z4S6 1674 aa39.8■■■■□ 3.96
CRB3-202ENST00000356762 CFTRP13569 1480 aa39.77■■■■□ 3.96
CRB3-202ENST00000356762 CCDC88BA6NC98 1476 aa39.58■■■■□ 3.93
CRB3-202ENST00000356762 MRC2Q9UBG0 1479 aa39.58■■■■□ 3.93
CRB3-202ENST00000356762 FANCD2Q9BXW9 1451 aa39.56■■■■□ 3.92
CRB3-202ENST00000356762 CEP164Q9UPV0 1460 aa39.55■■■■□ 3.92
CRB3-202ENST00000356762 WDR62O43379 1518 aa39.48■■■■□ 3.91
CRB3-202ENST00000356762 DNAJC5Q9H3Z4 198 aa39.45■■■■□ 3.91
CRB3-202ENST00000356762 PRDM2Q13029 1718 aa39.34■■■■□ 3.89
CRB3-202ENST00000356762 URB2Q14146 1524 aaKnown RBP39.17■■■■□ 3.86
CRB3-202ENST00000356762 ABCC8Q09428 1581 aa38.99■■■■□ 3.83
CRB3-202ENST00000356762 SUPT5HO00267 1087 aaKnown RBP38.93■■■■□ 3.82
CRB3-202ENST00000356762 TOPBP1Q92547 1522 aa38.89■■■■□ 3.82
CRB3-202ENST00000356762 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
CRB3-202ENST00000356762 IFT140Q96RY7 1462 aa38.79■■■■□ 3.8
CRB3-202ENST00000356762 ZNF608Q9ULD9 1512 aaPredicted RBP38.55■■■■□ 3.76
CRB3-202ENST00000356762 POLA1P09884 1462 aaPredicted RBP38.53■■■■□ 3.76
CRB3-202ENST00000356762 TARBP1Q13395 1621 aaKnown RBP38.49■■■■□ 3.75
CRB3-202ENST00000356762 OSCARQ8IYS5 282 aa38.46■■■■□ 3.75
CRB3-202ENST00000356762 CUX1P39880 1505 aa38.41■■■■□ 3.74
CRB3-202ENST00000356762 SOGA1O94964 1423 aa38.4■■■■□ 3.74
CRB3-202ENST00000356762 EIF4G3O43432 1585 aaKnown RBP38.36■■■■□ 3.73
CRB3-202ENST00000356762 FGD5Q6ZNL6 1462 aa38.35■■■■□ 3.73
CRB3-202ENST00000356762 RAD54L2Q9Y4B4 1467 aa38.32■■■■□ 3.72
CRB3-202ENST00000356762 AQRO60306 1485 aaKnown RBP eCLIP38.31■■■■□ 3.729e-8■■■■■ 30.5
CRB3-202ENST00000356762 WDR97A6NE52 1622 aa38.27■■■■□ 3.72
CRB3-202ENST00000356762 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
CRB3-202ENST00000356762 WRNQ14191 1432 aaPredicted RBP eCLIP38.06■■■■□ 3.68
CRB3-202ENST00000356762 ABCA10Q8WWZ4 1543 aa38.04■■■■□ 3.68
CRB3-202ENST00000356762 TOP2BQ02880 1626 aa38.02■■■■□ 3.68
CRB3-202ENST00000356762 GRIN2BQ13224 1484 aa38■■■■□ 3.67
CRB3-202ENST00000356762 BIVM-ERCC5R4GMW8 1640 aa38■■■■□ 3.67
CRB3-202ENST00000356762 MAGI1Q96QZ7 1491 aaPredicted RBP37.96■■■■□ 3.67
CRB3-202ENST00000356762 CHD1O14646 1710 aa37.93■■■■□ 3.66
CRB3-202ENST00000356762 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
CRB3-202ENST00000356762 SNAPC4Q5SXM2 1469 aa37.92■■■■□ 3.66
CRB3-202ENST00000356762 FBLN2P98095 1184 aa37.91■■■■□ 3.66
CRB3-202ENST00000356762 SYNJ1O43426 1573 aa37.9■■■■□ 3.66
CRB3-202ENST00000356762 ABCA5Q8WWZ7 1642 aa37.85■■■■□ 3.65
CRB3-202ENST00000356762 CHMP7Q8WUX9 453 aaPredicted RBP37.83■■■■□ 3.65
CRB3-202ENST00000356762 SYNJ2O15056 1496 aa37.8■■■■□ 3.64
CRB3-202ENST00000356762 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
CRB3-202ENST00000356762 TRIM41Q8WV44 630 aa37.77■■■■□ 3.64
CRB3-202ENST00000356762 RIMBP3CA6NJZ7 1639 aa37.74■■■■□ 3.63
CRB3-202ENST00000356762 RIMBP3BA6NNM3 1639 aa37.74■■■■□ 3.63
CRB3-202ENST00000356762 RIMBP3Q9UFD9 1639 aa37.74■■■■□ 3.63
CRB3-202ENST00000356762 ARHGEF11O15085 1522 aa37.73■■■■□ 3.63
CRB3-202ENST00000356762 CLASP1Q7Z460 1538 aa37.61■■■■□ 3.61
CRB3-202ENST00000356762 ERICH3Q5RHP9 1530 aa37.58■■■■□ 3.61
CRB3-202ENST00000356762 FHAD1B1AJZ9 1412 aa37.52■■■■□ 3.6
CRB3-202ENST00000356762 ADAMTS12P58397 1594 aa37.49■■■■□ 3.59
CRB3-202ENST00000356762 GRIN2AQ12879 1464 aa37.48■■■■□ 3.59
CRB3-202ENST00000356762 CYB5RLQ6IPT4 315 aa37.42■■■■□ 3.58
CRB3-202ENST00000356762 ARAP1Q96P48 1450 aa37.38■■■■□ 3.57
CRB3-202ENST00000356762 NUP160Q12769 1436 aa37.37■■■■□ 3.57
CRB3-202ENST00000356762 KIF27Q86VH2 1401 aa37.33■■■■□ 3.57
CRB3-202ENST00000356762 CEP170Q5SW79 1584 aa37.26■■■■□ 3.56
CRB3-202ENST00000356762 IGF1RP08069 1367 aa37.26■■■■□ 3.55
CRB3-202ENST00000356762 SHROOM2Q13796 1616 aa37.11■■■■□ 3.53
CRB3-202ENST00000356762 CUL7Q14999 1698 aa37.11■■■■□ 3.53
CRB3-202ENST00000356762 JPH4Q96JJ6 628 aa37.03■■■■□ 3.52
CRB3-202ENST00000356762 CARMIL1Q5VZK9 1371 aa37■■■■□ 3.51
CRB3-202ENST00000356762 ERCC6L2Q5T890 1561 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms