RNA–Protein interactions for RNA: ENST00000602212.5

NPAS1-208, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-208ENST00000602212 NISCHQ9Y2I1 1504 aa51.02■■■■■ 5.76
NPAS1-208ENST00000602212 CCDC180Q9P1Z9 1646 aa44.3■■■■■ 4.68
NPAS1-208ENST00000602212 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.46
NPAS1-208ENST00000602212 DCAF1Q9Y4B6 1507 aa42.13■■■■■ 4.33
NPAS1-208ENST00000602212 DCAF8L2P0C7V8 631 aa42.05■■■■■ 4.32
NPAS1-208ENST00000602212 SHROOM4Q9ULL8 1493 aa41.95■■■■■ 4.31
NPAS1-208ENST00000602212 ABCC9O60706 1549 aa41.65■■■■■ 4.26
NPAS1-208ENST00000602212 MYO15BQ96JP2 1530 aa41.48■■■■■ 4.23
NPAS1-208ENST00000602212 NACADO15069 1562 aa41.16■■■■■ 4.18
NPAS1-208ENST00000602212 SCRIBQ14160 1630 aa40.88■■■■■ 4.13
NPAS1-208ENST00000602212 RB1CC1Q8TDY2 1594 aa40.74■■■■■ 4.11
NPAS1-208ENST00000602212 SUPT5HO00267 1087 aaKnown RBP40.5■■■■■ 4.07
NPAS1-208ENST00000602212 UNC13AQ9UPW8 1703 aa40.04■■■■■ 4
NPAS1-208ENST00000602212 RSF1Q96T23 1441 aaPredicted RBP39.73■■■■□ 3.95
NPAS1-208ENST00000602212 CECR2Q9BXF3 1484 aa39.67■■■■□ 3.94
NPAS1-208ENST00000602212 BICRAQ9NZM4 1560 aa39.57■■■■□ 3.93
NPAS1-208ENST00000602212 MROH2BQ7Z745 1585 aa39.47■■■■□ 3.91
NPAS1-208ENST00000602212 PABPN1Q86U42 306 aaKnown RBP eCLIP39.35■■■■□ 3.89
NPAS1-208ENST00000602212 BAZ1AQ9NRL2 1556 aaPredicted RBP39.35■■■■□ 3.89
NPAS1-208ENST00000602212 WIZO95785 1651 aa39.19■■■■□ 3.86
NPAS1-208ENST00000602212 SMARCA4P51532 1647 aa39.16■■■■□ 3.86
NPAS1-208ENST00000602212 CHIC1Q5VXU3 224 aa38.92■■■■□ 3.82
NPAS1-208ENST00000602212 TOP2AP11388 1531 aaKnown RBP38.74■■■■□ 3.79
NPAS1-208ENST00000602212 PEG3Q9GZU2 1588 aa38.64■■■■□ 3.78
NPAS1-208ENST00000602212 ATAD2BQ9ULI0 1458 aa38.42■■■■□ 3.74
NPAS1-208ENST00000602212 SMARCA2P51531 1590 aa38.42■■■■□ 3.74
NPAS1-208ENST00000602212 CCDC88BA6NC98 1476 aa38.36■■■■□ 3.73
NPAS1-208ENST00000602212 EIF4G1Q04637 1599 aaKnown RBP38.33■■■■□ 3.73
NPAS1-208ENST00000602212 BAZ1BQ9UIG0 1483 aaKnown RBP38.22■■■■□ 3.71
NPAS1-208ENST00000602212 TRIM41Q8WV44 630 aa38■■■■□ 3.67
NPAS1-208ENST00000602212 NCAPD3P42695 1498 aa37.99■■■■□ 3.67
NPAS1-208ENST00000602212 HMGXB3Q12766 1538 aa37.98■■■■□ 3.67
NPAS1-208ENST00000602212 ABCC8Q09428 1581 aa37.73■■■■□ 3.63
NPAS1-208ENST00000602212 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
NPAS1-208ENST00000602212 LOC105371045A0A1W2PR82 267 aa37.5■■■■□ 3.59
NPAS1-208ENST00000602212 FAM9AQ8IZU1 332 aaPredicted RBP37.39■■■■□ 3.58
NPAS1-208ENST00000602212 WRNQ14191 1432 aaPredicted RBP eCLIP37.37■■■■□ 3.57
NPAS1-208ENST00000602212 CFTRP13569 1480 aa37.27■■■■□ 3.56
NPAS1-208ENST00000602212 SYNJ1O43426 1573 aa37.26■■■■□ 3.56
NPAS1-208ENST00000602212 PRDM2Q13029 1718 aa37.13■■■■□ 3.53
NPAS1-208ENST00000602212 SOGA1O94964 1423 aa37.06■■■■□ 3.52
NPAS1-208ENST00000602212 CADPSQ9ULU8 1353 aa37.05■■■■□ 3.52
NPAS1-208ENST00000602212 TOP2BQ02880 1626 aa37.04■■■■□ 3.52
NPAS1-208ENST00000602212 BIVM-ERCC5R4GMW8 1640 aa37■■■■□ 3.51
NPAS1-208ENST00000602212 EEA1Q15075 1411 aa36.96■■■■□ 3.51
NPAS1-208ENST00000602212 RUSC2Q8N2Y8 1516 aa36.93■■■■□ 3.5
NPAS1-208ENST00000602212 EHMT2Q96KQ7 1210 aa36.9■■■■□ 3.5
NPAS1-208ENST00000602212 CUX1P39880 1505 aa36.88■■■■□ 3.49
NPAS1-208ENST00000602212 CSRNP3Q8WYN3 585 aa36.76■■■■□ 3.48
NPAS1-208ENST00000602212 NESP48681 1621 aa36.7■■■■□ 3.47
NPAS1-208ENST00000602212 DNAJC5BQ9UF47 199 aa36.7■■■■□ 3.46
NPAS1-208ENST00000602212 FANCD2Q9BXW9 1451 aa36.67■■■■□ 3.46
NPAS1-208ENST00000602212 LAMC3Q9Y6N6 1575 aa36.66■■■■□ 3.46
NPAS1-208ENST00000602212 KIF21BO75037 1637 aa36.53■■■■□ 3.44
NPAS1-208ENST00000602212 GOLGA3Q08378 1498 aa36.52■■■■□ 3.44
NPAS1-208ENST00000602212 CEP164Q9UPV0 1460 aa36.48■■■■□ 3.43
NPAS1-208ENST00000602212 TNIKQ9UKE5 1360 aa36.45■■■■□ 3.43
NPAS1-208ENST00000602212 FGD5Q6ZNL6 1462 aa36.41■■■■□ 3.42
NPAS1-208ENST00000602212 DNMBPQ6XZF7 1577 aa36.4■■■■□ 3.42
NPAS1-208ENST00000602212 KIF27Q86VH2 1401 aa36.38■■■■□ 3.41
NPAS1-208ENST00000602212 UBTFP17480 764 aaKnown RBP36.34■■■■□ 3.41
NPAS1-208ENST00000602212 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
NPAS1-208ENST00000602212 CEP162Q5TB80 1403 aa36.33■■■■□ 3.41
NPAS1-208ENST00000602212 TOPBP1Q92547 1522 aa36.33■■■■□ 3.41
NPAS1-208ENST00000602212 RAPGEF2Q9Y4G8 1499 aa36.29■■■■□ 3.4
NPAS1-208ENST00000602212 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.39
NPAS1-208ENST00000602212 CUX2O14529 1486 aa36.24■■■■□ 3.39
NPAS1-208ENST00000602212 PRXQ9BXM0 1461 aa36.24■■■■□ 3.39
NPAS1-208ENST00000602212 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
NPAS1-208ENST00000602212 ERICH3Q5RHP9 1530 aa36.2■■■■□ 3.39
NPAS1-208ENST00000602212 POLA1P09884 1462 aaPredicted RBP36.19■■■■□ 3.38
NPAS1-208ENST00000602212 PCGF6Q9BYE7 350 aa36.13■■■■□ 3.37
NPAS1-208ENST00000602212 RAD54L2Q9Y4B4 1467 aa36.09■■■■□ 3.37
NPAS1-208ENST00000602212 ABCA10Q8WWZ4 1543 aa36.07■■■■□ 3.36
NPAS1-208ENST00000602212 IGF1RP08069 1367 aa36.02■■■■□ 3.36
NPAS1-208ENST00000602212 TRIM26Q12899 539 aaPredicted RBP35.99■■■■□ 3.35
NPAS1-208ENST00000602212 WDR97A6NE52 1622 aa35.96■■■■□ 3.35
NPAS1-208ENST00000602212 CLIP1P30622 1438 aa35.96■■■■□ 3.35
NPAS1-208ENST00000602212 MRC2Q9UBG0 1479 aa35.88■■■■□ 3.33
NPAS1-208ENST00000602212 CARMIL1Q5VZK9 1371 aa35.85■■■■□ 3.33
NPAS1-208ENST00000602212 ABCA5Q8WWZ7 1642 aa35.78■■■■□ 3.32
NPAS1-208ENST00000602212 TARBP1Q13395 1621 aaKnown RBP35.76■■■■□ 3.32
NPAS1-208ENST00000602212 PPARGC1BQ86YN6 1023 aaKnown RBP35.75■■■■□ 3.31
NPAS1-208ENST00000602212 CUL7Q14999 1698 aa35.72■■■■□ 3.31
NPAS1-208ENST00000602212 RANGAP1P46060 587 aaPredicted RBP35.72■■■■□ 3.31
NPAS1-208ENST00000602212 WDR62O43379 1518 aa35.7■■■■□ 3.3
NPAS1-208ENST00000602212 TDRD9Q8NDG6 1382 aaKnown RBP35.7■■■■□ 3.3
NPAS1-208ENST00000602212 VPS8Q8N3P4 1428 aa35.69■■■■□ 3.3
NPAS1-208ENST00000602212 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
NPAS1-208ENST00000602212 ERCC6Q03468 1493 aa35.64■■■■□ 3.3
NPAS1-208ENST00000602212 ARAP1Q96P48 1450 aa35.59■■■■□ 3.29
NPAS1-208ENST00000602212 THOC2Q8NI27 1593 aaKnown RBP35.54■■■■□ 3.28
NPAS1-208ENST00000602212 ARHGAP35Q9NRY4 1499 aa35.51■■■■□ 3.28
NPAS1-208ENST00000602212 IFT140Q96RY7 1462 aa35.49■■■■□ 3.27
NPAS1-208ENST00000602212 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
NPAS1-208ENST00000602212 CTTNBP2Q8WZ74 1663 aa35.42■■■■□ 3.26
NPAS1-208ENST00000602212 AQRO60306 1485 aaKnown RBP eCLIP35.42■■■■□ 3.26
NPAS1-208ENST00000602212 TTBK1Q5TCY1 1321 aaPredicted RBP35.4■■■■□ 3.26
NPAS1-208ENST00000602212 ZNF608Q9ULD9 1512 aaPredicted RBP35.36■■■■□ 3.25
NPAS1-208ENST00000602212 HRCP23327 699 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms