RNA–Protein interactions for RNA: ENST00000370985.3

GADD45A-201, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-201ENST00000370985 NISCHQ9Y2I1 1504 aa53.19■■■■■ 6.11
GADD45A-201ENST00000370985 CCDC180Q9P1Z9 1646 aa47.45■■■■■ 5.19
GADD45A-201ENST00000370985 ABCC9O60706 1549 aa47.39■■■■■ 5.18
GADD45A-201ENST00000370985 RB1CC1Q8TDY2 1594 aa45.09■■■■■ 4.81
GADD45A-201ENST00000370985 DCAF8L2P0C7V8 631 aa45.01■■■■■ 4.8
GADD45A-201ENST00000370985 NACADO15069 1562 aa44.85■■■■■ 4.77
GADD45A-201ENST00000370985 DNAJC5BQ9UF47 199 aa44.29■■■■■ 4.68
GADD45A-201ENST00000370985 PABPN1Q86U42 306 aaKnown RBP eCLIP44.28■■■■■ 4.68
GADD45A-201ENST00000370985 MYO15BQ96JP2 1530 aa44.25■■■■■ 4.67
GADD45A-201ENST00000370985 UNC13AQ9UPW8 1703 aa44.13■■■■■ 4.66
GADD45A-201ENST00000370985 ZCCHC6Q5VYS8 1495 aaKnown RBP44.12■■■■■ 4.65
GADD45A-201ENST00000370985 BICRAQ9NZM4 1560 aa43.84■■■■■ 4.61
GADD45A-201ENST00000370985 DCAF1Q9Y4B6 1507 aa43.83■■■■■ 4.61
GADD45A-201ENST00000370985 SCRIBQ14160 1630 aa43.44■■■■■ 4.55
GADD45A-201ENST00000370985 SHROOM4Q9ULL8 1493 aa43.06■■■■■ 4.48
GADD45A-201ENST00000370985 CC2D2AQ9P2K1 1620 aa42.75■■■■■ 4.43
GADD45A-201ENST00000370985 EIF4G1Q04637 1599 aaKnown RBP42.71■■■■■ 4.43
GADD45A-201ENST00000370985 CECR2Q9BXF3 1484 aa42.6■■■■■ 4.41
GADD45A-201ENST00000370985 NCAPD3P42695 1498 aa41.45■■■■■ 4.23
GADD45A-201ENST00000370985 ATAD2BQ9ULI0 1458 aa41.41■■■■■ 4.22
GADD45A-201ENST00000370985 SMARCA4P51532 1647 aa41.4■■■■■ 4.22
GADD45A-201ENST00000370985 SMARCA2P51531 1590 aa41.23■■■■■ 4.19
GADD45A-201ENST00000370985 BAZ1AQ9NRL2 1556 aaPredicted RBP41.21■■■■■ 4.19
GADD45A-201ENST00000370985 HMGXB3Q12766 1538 aa41.1■■■■■ 4.17
GADD45A-201ENST00000370985 MROH2BQ7Z745 1585 aa41.04■■■■■ 4.16
GADD45A-201ENST00000370985 BAZ1BQ9UIG0 1483 aaKnown RBP41.01■■■■■ 4.16
GADD45A-201ENST00000370985 PEG3Q9GZU2 1588 aa40.93■■■■■ 4.14
GADD45A-201ENST00000370985 ERCC6Q03468 1493 aa40.84■■■■■ 4.13
GADD45A-201ENST00000370985 NESP48681 1621 aa40.82■■■■■ 4.12
GADD45A-201ENST00000370985 WIZO95785 1651 aa40.58■■■■■ 4.09
GADD45A-201ENST00000370985 CUX2O14529 1486 aa40.56■■■■■ 4.08
GADD45A-201ENST00000370985 LAMC3Q9Y6N6 1575 aa40.4■■■■■ 4.06
GADD45A-201ENST00000370985 DNAJC5Q9H3Z4 198 aa40.32■■■■■ 4.05
GADD45A-201ENST00000370985 RSF1Q96T23 1441 aaPredicted RBP40.32■■■■■ 4.04
GADD45A-201ENST00000370985 CADPSQ9ULU8 1353 aa40.24■■■■■ 4.03
GADD45A-201ENST00000370985 PDS5BQ9NTI5 1447 aa40.23■■■■■ 4.03
GADD45A-201ENST00000370985 KIF21AQ7Z4S6 1674 aa40.22■■■■■ 4.03
GADD45A-201ENST00000370985 THOC2Q8NI27 1593 aaKnown RBP40.2■■■■■ 4.03
GADD45A-201ENST00000370985 TOP2AP11388 1531 aaKnown RBP40■■■■□ 3.99
GADD45A-201ENST00000370985 MRC2Q9UBG0 1479 aa39.86■■■■□ 3.97
GADD45A-201ENST00000370985 CFTRP13569 1480 aa39.82■■■■□ 3.97
GADD45A-201ENST00000370985 FANCD2Q9BXW9 1451 aa39.79■■■■□ 3.96
GADD45A-201ENST00000370985 CEP164Q9UPV0 1460 aa39.77■■■■□ 3.96
GADD45A-201ENST00000370985 WDR62O43379 1518 aa39.72■■■■□ 3.95
GADD45A-201ENST00000370985 CCDC88BA6NC98 1476 aa39.63■■■■□ 3.94
GADD45A-201ENST00000370985 URB2Q14146 1524 aaKnown RBP39.45■■■■□ 3.91
GADD45A-201ENST00000370985 PRDM2Q13029 1718 aa39.36■■■■□ 3.89
GADD45A-201ENST00000370985 TOPBP1Q92547 1522 aa39.07■■■■□ 3.84
GADD45A-201ENST00000370985 ZNF608Q9ULD9 1512 aaPredicted RBP38.96■■■■□ 3.83
GADD45A-201ENST00000370985 IFT140Q96RY7 1462 aa38.95■■■■□ 3.83
GADD45A-201ENST00000370985 SUPT5HO00267 1087 aaKnown RBP38.94■■■■□ 3.82
GADD45A-201ENST00000370985 ABCC8Q09428 1581 aa38.91■■■■□ 3.82
GADD45A-201ENST00000370985 OSCARQ8IYS5 282 aa38.9■■■■□ 3.82
GADD45A-201ENST00000370985 DNMBPQ6XZF7 1577 aa38.9■■■■□ 3.82
GADD45A-201ENST00000370985 TRIM41Q8WV44 630 aa38.81■■■■□ 3.8
GADD45A-201ENST00000370985 POLA1P09884 1462 aaPredicted RBP38.69■■■■□ 3.78
GADD45A-201ENST00000370985 AQRO60306 1485 aaKnown RBP eCLIP38.67■■■■□ 3.782e-8■■■■□ 20.7
GADD45A-201ENST00000370985 TARBP1Q13395 1621 aaKnown RBP38.67■■■■□ 3.78
GADD45A-201ENST00000370985 EIF4G3O43432 1585 aaKnown RBP38.66■■■■□ 3.78
GADD45A-201ENST00000370985 RAD54L2Q9Y4B4 1467 aa38.63■■■■□ 3.77
GADD45A-201ENST00000370985 SOGA1O94964 1423 aa38.56■■■■□ 3.76
GADD45A-201ENST00000370985 CUX1P39880 1505 aa38.53■■■■□ 3.76
GADD45A-201ENST00000370985 FGD5Q6ZNL6 1462 aa38.5■■■■□ 3.75
GADD45A-201ENST00000370985 TDRD9Q8NDG6 1382 aaKnown RBP38.5■■■■□ 3.75
GADD45A-201ENST00000370985 FBLN2P98095 1184 aa38.42■■■■□ 3.74
GADD45A-201ENST00000370985 CHD1O14646 1710 aa38.35■■■■□ 3.73
GADD45A-201ENST00000370985 RIMBP3CA6NJZ7 1639 aa38.3■■■■□ 3.72
GADD45A-201ENST00000370985 RIMBP3BA6NNM3 1639 aa38.3■■■■□ 3.72
GADD45A-201ENST00000370985 RIMBP3Q9UFD9 1639 aa38.3■■■■□ 3.72
GADD45A-201ENST00000370985 SNAPC4Q5SXM2 1469 aa38.22■■■■□ 3.71
GADD45A-201ENST00000370985 ARHGEF11O15085 1522 aa38.21■■■■□ 3.71
GADD45A-201ENST00000370985 WDR97A6NE52 1622 aa38.15■■■■□ 3.7
GADD45A-201ENST00000370985 GRIN2BQ13224 1484 aa38.12■■■■□ 3.69
GADD45A-201ENST00000370985 CHMP7Q8WUX9 453 aaPredicted RBP38.12■■■■□ 3.69
GADD45A-201ENST00000370985 GAPVD1Q14C86 1478 aa38.07■■■■□ 3.68
GADD45A-201ENST00000370985 CYB5RLQ6IPT4 315 aa38.06■■■■□ 3.68
GADD45A-201ENST00000370985 MAGI1Q96QZ7 1491 aaPredicted RBP38.05■■■■□ 3.68
GADD45A-201ENST00000370985 ABCA10Q8WWZ4 1543 aa38.03■■■■□ 3.68
GADD45A-201ENST00000370985 WRNQ14191 1432 aaPredicted RBP eCLIP38■■■■□ 3.67
GADD45A-201ENST00000370985 PBRM1Q86U86 1689 aa37.98■■■■□ 3.67
GADD45A-201ENST00000370985 SYNJ1O43426 1573 aa37.96■■■■□ 3.67
GADD45A-201ENST00000370985 SYNJ2O15056 1496 aa37.96■■■■□ 3.67
GADD45A-201ENST00000370985 TOP2BQ02880 1626 aa37.94■■■■□ 3.66
GADD45A-201ENST00000370985 ABCA5Q8WWZ7 1642 aa37.93■■■■□ 3.66
GADD45A-201ENST00000370985 BIVM-ERCC5R4GMW8 1640 aa37.9■■■■□ 3.66
GADD45A-201ENST00000370985 ARAP1Q96P48 1450 aa37.88■■■■□ 3.65
GADD45A-201ENST00000370985 CLASP1Q7Z460 1538 aa37.87■■■■□ 3.65
GADD45A-201ENST00000370985 GRIN2AQ12879 1464 aa37.64■■■■□ 3.62
GADD45A-201ENST00000370985 ADAMTS12P58397 1594 aa37.63■■■■□ 3.61
GADD45A-201ENST00000370985 FHAD1B1AJZ9 1412 aa37.57■■■■□ 3.6
GADD45A-201ENST00000370985 ERICH3Q5RHP9 1530 aa37.54■■■■□ 3.6
GADD45A-201ENST00000370985 TRHP20396 242 aaPredicted RBP37.53■■■■□ 3.6
GADD45A-201ENST00000370985 CEP170Q5SW79 1584 aa37.51■■■■□ 3.6
GADD45A-201ENST00000370985 NUP160Q12769 1436 aa37.49■■■■□ 3.59
GADD45A-201ENST00000370985 ERCC6L2Q5T890 1561 aa37.43■■■■□ 3.58
GADD45A-201ENST00000370985 IGF1RP08069 1367 aa37.27■■■■□ 3.56
GADD45A-201ENST00000370985 SHROOM2Q13796 1616 aa37.25■■■■□ 3.55
GADD45A-201ENST00000370985 KIF27Q86VH2 1401 aa37.24■■■■□ 3.55
GADD45A-201ENST00000370985 JPH4Q96JJ6 628 aa37.22■■■■□ 3.55
GADD45A-201ENST00000370985 PRG4Q92954 1404 aaPredicted RBP37.18■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms