RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-224ENST00000618048 NISCHQ9Y2I1 1504 aa53.75■■■■■ 6.2
KCNMA1-224ENST00000618048 CCDC180Q9P1Z9 1646 aa48.29■■■■■ 5.32
KCNMA1-224ENST00000618048 ABCC9O60706 1549 aa48.26■■■■■ 5.32
KCNMA1-224ENST00000618048 RB1CC1Q8TDY2 1594 aa45.96■■■■■ 4.95
KCNMA1-224ENST00000618048 NACADO15069 1562 aa45.63■■■■■ 4.9
KCNMA1-224ENST00000618048 DCAF8L2P0C7V8 631 aa45.31■■■■■ 4.84
KCNMA1-224ENST00000618048 DNAJC5BQ9UF47 199 aa45.21■■■■■ 4.83
KCNMA1-224ENST00000618048 MYO15BQ96JP2 1530 aa45.01■■■■■ 4.8
KCNMA1-224ENST00000618048 PABPN1Q86U42 306 aaKnown RBP eCLIP44.88■■■■■ 4.78
KCNMA1-224ENST00000618048 UNC13AQ9UPW8 1703 aa44.88■■■■■ 4.78
KCNMA1-224ENST00000618048 BICRAQ9NZM4 1560 aa44.59■■■■■ 4.73
KCNMA1-224ENST00000618048 ZCCHC6Q5VYS8 1495 aaKnown RBP44.57■■■■■ 4.73
KCNMA1-224ENST00000618048 DCAF1Q9Y4B6 1507 aa44.41■■■■■ 4.7
KCNMA1-224ENST00000618048 SHROOM4Q9ULL8 1493 aa44.06■■■■■ 4.64
KCNMA1-224ENST00000618048 SCRIBQ14160 1630 aa43.98■■■■■ 4.63
KCNMA1-224ENST00000618048 CC2D2AQ9P2K1 1620 aa43.6■■■■■ 4.57
KCNMA1-224ENST00000618048 EIF4G1Q04637 1599 aaKnown RBP43.51■■■■■ 4.56
KCNMA1-224ENST00000618048 CECR2Q9BXF3 1484 aa43.49■■■■■ 4.55
KCNMA1-224ENST00000618048 NCAPD3P42695 1498 aa42.11■■■■■ 4.33
KCNMA1-224ENST00000618048 ATAD2BQ9ULI0 1458 aa41.98■■■■■ 4.31
KCNMA1-224ENST00000618048 SMARCA4P51532 1647 aa41.95■■■■■ 4.31
KCNMA1-224ENST00000618048 SMARCA2P51531 1590 aa41.89■■■■■ 4.3
KCNMA1-224ENST00000618048 HMGXB3Q12766 1538 aa41.84■■■■■ 4.29
KCNMA1-224ENST00000618048 BAZ1AQ9NRL2 1556 aaPredicted RBP41.75■■■■■ 4.27
KCNMA1-224ENST00000618048 ERCC6Q03468 1493 aa41.7■■■■■ 4.27
KCNMA1-224ENST00000618048 CUX2O14529 1486 aa41.63■■■■■ 4.25
KCNMA1-224ENST00000618048 BAZ1BQ9UIG0 1483 aaKnown RBP41.6■■■■■ 4.25
KCNMA1-224ENST00000618048 DNAJC5Q9H3Z4 198 aa41.56■■■■■ 4.24
KCNMA1-224ENST00000618048 PEG3Q9GZU2 1588 aa41.54■■■■■ 4.24
KCNMA1-224ENST00000618048 NESP48681 1621 aa41.44■■■■■ 4.22
KCNMA1-224ENST00000618048 MROH2BQ7Z745 1585 aa41.41■■■■■ 4.22
KCNMA1-224ENST00000618048 LAMC3Q9Y6N6 1575 aa41.19■■■■■ 4.18
KCNMA1-224ENST00000618048 THOC2Q8NI27 1593 aaKnown RBP41.07■■■■■ 4.16
KCNMA1-224ENST00000618048 PDS5BQ9NTI5 1447 aa40.93■■■■■ 4.14
KCNMA1-224ENST00000618048 KIF21AQ7Z4S6 1674 aa40.93■■■■■ 4.14
KCNMA1-224ENST00000618048 WIZO95785 1651 aa40.91■■■■■ 4.14
KCNMA1-224ENST00000618048 CADPSQ9ULU8 1353 aa40.82■■■■■ 4.12
KCNMA1-224ENST00000618048 MRC2Q9UBG0 1479 aa40.6■■■■■ 4.09
KCNMA1-224ENST00000618048 RSF1Q96T23 1441 aaPredicted RBP40.53■■■■■ 4.08
KCNMA1-224ENST00000618048 WDR62O43379 1518 aa40.5■■■■■ 4.07
KCNMA1-224ENST00000618048 CEP164Q9UPV0 1460 aa40.45■■■■■ 4.07
KCNMA1-224ENST00000618048 TOP2AP11388 1531 aaKnown RBP40.43■■■■■ 4.06
KCNMA1-224ENST00000618048 FANCD2Q9BXW9 1451 aa40.38■■■■■ 4.05
KCNMA1-224ENST00000618048 CFTRP13569 1480 aa40.36■■■■■ 4.05
KCNMA1-224ENST00000618048 URB2Q14146 1524 aaKnown RBP40.04■■■■■ 4
KCNMA1-224ENST00000618048 PRDM2Q13029 1718 aa39.99■■■■□ 3.99
KCNMA1-224ENST00000618048 CCDC88BA6NC98 1476 aa39.93■■■■□ 3.98
KCNMA1-224ENST00000618048 TRIM41Q8WV44 630 aa39.74■■■■□ 3.95
KCNMA1-224ENST00000618048 OSCARQ8IYS5 282 aa39.67■■■■□ 3.94
KCNMA1-224ENST00000618048 IFT140Q96RY7 1462 aa39.62■■■■□ 3.93
KCNMA1-224ENST00000618048 TOPBP1Q92547 1522 aa39.61■■■■□ 3.93
KCNMA1-224ENST00000618048 ZNF608Q9ULD9 1512 aaPredicted RBP39.54■■■■□ 3.92
KCNMA1-224ENST00000618048 ABCC8Q09428 1581 aa39.53■■■■□ 3.92
KCNMA1-224ENST00000618048 DNMBPQ6XZF7 1577 aa39.48■■■■□ 3.91
KCNMA1-224ENST00000618048 EIF4G3O43432 1585 aaKnown RBP39.37■■■■□ 3.89
KCNMA1-224ENST00000618048 TARBP1Q13395 1621 aaKnown RBP39.25■■■■□ 3.87
KCNMA1-224ENST00000618048 POLA1P09884 1462 aaPredicted RBP39.21■■■■□ 3.87
KCNMA1-224ENST00000618048 RIMBP3CA6NJZ7 1639 aa39.2■■■■□ 3.87
KCNMA1-224ENST00000618048 RIMBP3BA6NNM3 1639 aa39.2■■■■□ 3.87
KCNMA1-224ENST00000618048 RIMBP3Q9UFD9 1639 aa39.2■■■■□ 3.87
KCNMA1-224ENST00000618048 AQRO60306 1485 aaKnown RBP eCLIP39.17■■■■□ 3.86
KCNMA1-224ENST00000618048 ARHGEF11O15085 1522 aa39.09■■■■□ 3.85
KCNMA1-224ENST00000618048 CHD1O14646 1710 aa39.05■■■■□ 3.84
KCNMA1-224ENST00000618048 RAD54L2Q9Y4B4 1467 aa39.04■■■■□ 3.84
KCNMA1-224ENST00000618048 SOGA1O94964 1423 aa39■■■■□ 3.83
KCNMA1-224ENST00000618048 FGD5Q6ZNL6 1462 aa38.96■■■■□ 3.83
KCNMA1-224ENST00000618048 TDRD9Q8NDG6 1382 aaKnown RBP38.93■■■■□ 3.82
KCNMA1-224ENST00000618048 CUX1P39880 1505 aa38.91■■■■□ 3.82
KCNMA1-224ENST00000618048 FBLN2P98095 1184 aa38.91■■■■□ 3.82
KCNMA1-224ENST00000618048 WDR97A6NE52 1622 aa38.89■■■■□ 3.82
KCNMA1-224ENST00000618048 SNAPC4Q5SXM2 1469 aa38.8■■■■□ 3.8
KCNMA1-224ENST00000618048 CYB5RLQ6IPT4 315 aa38.74■■■■□ 3.79
KCNMA1-224ENST00000618048 MAGI1Q96QZ7 1491 aaPredicted RBP38.72■■■■□ 3.79
KCNMA1-224ENST00000618048 SUPT5HO00267 1087 aaKnown RBP38.7■■■■□ 3.79
KCNMA1-224ENST00000618048 GRIN2BQ13224 1484 aa38.7■■■■□ 3.79
KCNMA1-224ENST00000618048 ARAP1Q96P48 1450 aa38.69■■■■□ 3.78
KCNMA1-224ENST00000618048 CHMP7Q8WUX9 453 aaPredicted RBP38.63■■■■□ 3.77
KCNMA1-224ENST00000618048 CLASP1Q7Z460 1538 aa38.61■■■■□ 3.77
KCNMA1-224ENST00000618048 SYNJ1O43426 1573 aa38.61■■■■□ 3.77
KCNMA1-224ENST00000618048 SYNJ2O15056 1496 aa38.58■■■■□ 3.77
KCNMA1-224ENST00000618048 PBRM1Q86U86 1689 aa38.55■■■■□ 3.76
KCNMA1-224ENST00000618048 GAPVD1Q14C86 1478 aa38.54■■■■□ 3.76
KCNMA1-224ENST00000618048 ABCA10Q8WWZ4 1543 aa38.53■■■■□ 3.76
KCNMA1-224ENST00000618048 ABCA5Q8WWZ7 1642 aa38.48■■■■□ 3.75
KCNMA1-224ENST00000618048 WRNQ14191 1432 aaPredicted RBP eCLIP38.36■■■■□ 3.73
KCNMA1-224ENST00000618048 TRHP20396 242 aaPredicted RBP38.33■■■■□ 3.73
KCNMA1-224ENST00000618048 BIVM-ERCC5R4GMW8 1640 aa38.3■■■■□ 3.72
KCNMA1-224ENST00000618048 TOP2BQ02880 1626 aa38.3■■■■□ 3.72
KCNMA1-224ENST00000618048 GRIN2AQ12879 1464 aa38.21■■■■□ 3.71
KCNMA1-224ENST00000618048 ADAMTS12P58397 1594 aa38.2■■■■□ 3.71
KCNMA1-224ENST00000618048 FHAD1B1AJZ9 1412 aa38.07■■■■□ 3.69
KCNMA1-224ENST00000618048 NUP160Q12769 1436 aa38.07■■■■□ 3.69
KCNMA1-224ENST00000618048 CEP170Q5SW79 1584 aa38.06■■■■□ 3.68
KCNMA1-224ENST00000618048 ERICH3Q5RHP9 1530 aa38.05■■■■□ 3.68
KCNMA1-224ENST00000618048 ERCC6L2Q5T890 1561 aa37.98■■■■□ 3.67
KCNMA1-224ENST00000618048 SHROOM2Q13796 1616 aa37.91■■■■□ 3.66
KCNMA1-224ENST00000618048 PRG4Q92954 1404 aaPredicted RBP37.7■■■■□ 3.62
KCNMA1-224ENST00000618048 RUSC2Q8N2Y8 1516 aa37.67■■■■□ 3.62
KCNMA1-224ENST00000618048 JPH4Q96JJ6 628 aa37.63■■■■□ 3.61
KCNMA1-224ENST00000618048 KIF27Q86VH2 1401 aa37.54■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms