Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
BRD9Q9H8M2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
BRD9Q9H8M2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.13■■□□□ 1.29
BRD9Q9H8M2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.13■■□□□ 1.29
BRD9Q9H8M2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.12■■□□□ 1.29
BRD9Q9H8M2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
BRD9Q9H8M2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.12■■□□□ 1.29
BRD9Q9H8M2 AC092437.1-201ENST00000624794 1048 ntBASIC23.12■■□□□ 1.29
BRD9Q9H8M2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.12■■□□□ 1.29
BRD9Q9H8M2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.12■■□□□ 1.29
BRD9Q9H8M2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
BRD9Q9H8M2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.11■■□□□ 1.29
BRD9Q9H8M2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.11■■□□□ 1.29
BRD9Q9H8M2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 AC004911.1-201ENST00000416316 871 ntBASIC23.1■■□□□ 1.29
BRD9Q9H8M2 CCDC92B-201ENST00000575506 885 ntBASIC23.1■■□□□ 1.29
BRD9Q9H8M2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
BRD9Q9H8M2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
BRD9Q9H8M2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.08■■□□□ 1.29
BRD9Q9H8M2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
BRD9Q9H8M2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.08■■□□□ 1.28
BRD9Q9H8M2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 AL499627.2-201ENST00000606283 725 ntBASIC23.07■■□□□ 1.28
BRD9Q9H8M2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.07■■□□□ 1.28
BRD9Q9H8M2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
BRD9Q9H8M2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
BRD9Q9H8M2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
BRD9Q9H8M2 AC010525.1-201ENST00000585559 441 ntBASIC23.06■■□□□ 1.28
BRD9Q9H8M2 NTF6G-201ENST00000591094 616 ntBASIC23.06■■□□□ 1.28
BRD9Q9H8M2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms