Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.01■■■□□ 2.4
CLDND1Q9NY35 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CLDND1Q9NY35 ABHD17AP4-201ENST00000411545 909 ntBASIC30■■■□□ 2.39
CLDND1Q9NY35 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CLDND1Q9NY35 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CLDND1Q9NY35 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CLDND1Q9NY35 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.95■■■□□ 2.39
CLDND1Q9NY35 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CLDND1Q9NY35 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CLDND1Q9NY35 AL133380.1-201ENST00000506013 324 ntBASIC29.94■■■□□ 2.38
CLDND1Q9NY35 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.94■■■□□ 2.38
CLDND1Q9NY35 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
CLDND1Q9NY35 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.93■■■□□ 2.38
CLDND1Q9NY35 MIR3665-201ENST00000578708 105 ntBASIC29.91■■■□□ 2.38
CLDND1Q9NY35 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CLDND1Q9NY35 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.9■■■□□ 2.38
CLDND1Q9NY35 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.89■■■□□ 2.38
CLDND1Q9NY35 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.88■■■□□ 2.37
CLDND1Q9NY35 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.86■■■□□ 2.37
CLDND1Q9NY35 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CLDND1Q9NY35 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
CLDND1Q9NY35 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.84■■■□□ 2.37
CLDND1Q9NY35 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CLDND1Q9NY35 HLA-V-202ENST00000446817 847 ntBASIC29.78■■■□□ 2.36
CLDND1Q9NY35 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.78■■■□□ 2.36
CLDND1Q9NY35 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CLDND1Q9NY35 AC087741.3-201ENST00000624270 1347 ntBASIC29.77■■■□□ 2.36
CLDND1Q9NY35 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
CLDND1Q9NY35 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CLDND1Q9NY35 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CLDND1Q9NY35 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
CLDND1Q9NY35 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.76■■■□□ 2.35
CLDND1Q9NY35 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CLDND1Q9NY35 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CLDND1Q9NY35 DUX4L28-201ENST00000623687 678 ntBASIC29.72■■■□□ 2.35
CLDND1Q9NY35 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC29.71■■■□□ 2.35
CLDND1Q9NY35 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.69■■■□□ 2.34
CLDND1Q9NY35 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.68■■■□□ 2.34
CLDND1Q9NY35 AC044849.2-201ENST00000606596 710 ntBASIC29.68■■■□□ 2.34
CLDND1Q9NY35 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CLDND1Q9NY35 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.66■■■□□ 2.34
CLDND1Q9NY35 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.66■■■□□ 2.34
CLDND1Q9NY35 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
CLDND1Q9NY35 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.64■■■□□ 2.34
CLDND1Q9NY35 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.63■■■□□ 2.33
CLDND1Q9NY35 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CLDND1Q9NY35 MIR762-201ENST00000390236 83 ntBASIC29.6■■■□□ 2.33
CLDND1Q9NY35 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CLDND1Q9NY35 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.59■■■□□ 2.33
CLDND1Q9NY35 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
CLDND1Q9NY35 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
CLDND1Q9NY35 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CLDND1Q9NY35 AC005559.1-201ENST00000589661 871 ntBASIC29.57■■■□□ 2.32
CLDND1Q9NY35 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.56■■■□□ 2.32
CLDND1Q9NY35 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.54■■■□□ 2.32
CLDND1Q9NY35 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CLDND1Q9NY35 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CLDND1Q9NY35 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.53■■■□□ 2.32
CLDND1Q9NY35 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CLDND1Q9NY35 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
CLDND1Q9NY35 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CLDND1Q9NY35 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CLDND1Q9NY35 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.49■■■□□ 2.31
CLDND1Q9NY35 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.49■■■□□ 2.31
CLDND1Q9NY35 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.47■■■□□ 2.31
CLDND1Q9NY35 ZNRF2P2-203ENST00000454624 420 ntBASIC29.46■■■□□ 2.31
CLDND1Q9NY35 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.45■■■□□ 2.31
CLDND1Q9NY35 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.44■■■□□ 2.3
CLDND1Q9NY35 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.44■■■□□ 2.3
CLDND1Q9NY35 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.43■■■□□ 2.3
CLDND1Q9NY35 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.42■■■□□ 2.3
CLDND1Q9NY35 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.42■■■□□ 2.3
CLDND1Q9NY35 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CLDND1Q9NY35 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.41■■■□□ 2.3
CLDND1Q9NY35 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CLDND1Q9NY35 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CLDND1Q9NY35 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CLDND1Q9NY35 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CLDND1Q9NY35 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.3■■■□□ 2.28
CLDND1Q9NY35 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.3■■■□□ 2.28
CLDND1Q9NY35 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CLDND1Q9NY35 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
CLDND1Q9NY35 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CLDND1Q9NY35 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CLDND1Q9NY35 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CLDND1Q9NY35 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CLDND1Q9NY35 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.27■■■□□ 2.28
CLDND1Q9NY35 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CLDND1Q9NY35 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CLDND1Q9NY35 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.25■■■□□ 2.27
CLDND1Q9NY35 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.24■■■□□ 2.27
CLDND1Q9NY35 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CLDND1Q9NY35 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.23■■■□□ 2.27
CLDND1Q9NY35 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CLDND1Q9NY35 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLDND1Q9NY35 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.21■■■□□ 2.27
CLDND1Q9NY35 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CLDND1Q9NY35 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CLDND1Q9NY35 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.2■■■□□ 2.26
CLDND1Q9NY35 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms