Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.62■■■□□ 2.49
RAD9AQ99638 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RAD9AQ99638 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.6■■■□□ 2.49
RAD9AQ99638 AL133380.1-201ENST00000506013 324 ntBASIC30.59■■■□□ 2.49
RAD9AQ99638 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RAD9AQ99638 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
RAD9AQ99638 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RAD9AQ99638 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.56■■■□□ 2.48
RAD9AQ99638 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RAD9AQ99638 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
RAD9AQ99638 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
RAD9AQ99638 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RAD9AQ99638 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RAD9AQ99638 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.46■■■□□ 2.47
RAD9AQ99638 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RAD9AQ99638 MIR3665-201ENST00000578708 105 ntBASIC30.46■■■□□ 2.47
RAD9AQ99638 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.45■■■□□ 2.47
RAD9AQ99638 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.45■■■□□ 2.47
RAD9AQ99638 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
RAD9AQ99638 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
RAD9AQ99638 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RAD9AQ99638 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.43■■■□□ 2.46
RAD9AQ99638 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.42■■■□□ 2.46
RAD9AQ99638 ABHD17AP4-201ENST00000411545 909 ntBASIC30.41■■■□□ 2.46
RAD9AQ99638 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.39■■■□□ 2.46
RAD9AQ99638 MIR7108-201ENST00000614319 87 ntBASIC30.39■■■□□ 2.46
RAD9AQ99638 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.38■■■□□ 2.45
RAD9AQ99638 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RAD9AQ99638 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
RAD9AQ99638 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.35■■■□□ 2.45
RAD9AQ99638 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RAD9AQ99638 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAD9AQ99638 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAD9AQ99638 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.32■■■□□ 2.44
RAD9AQ99638 AC087741.3-201ENST00000624270 1347 ntBASIC30.31■■■□□ 2.44
RAD9AQ99638 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
RAD9AQ99638 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.29■■■□□ 2.44
RAD9AQ99638 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
RAD9AQ99638 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.25■■■□□ 2.43
RAD9AQ99638 DUX4L28-201ENST00000623687 678 ntBASIC30.25■■■□□ 2.43
RAD9AQ99638 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.24■■■□□ 2.43
RAD9AQ99638 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RAD9AQ99638 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAD9AQ99638 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.22■■■□□ 2.43
RAD9AQ99638 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
RAD9AQ99638 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.19■■■□□ 2.42
RAD9AQ99638 AC044849.2-201ENST00000606596 710 ntBASIC30.19■■■□□ 2.42
RAD9AQ99638 MIR762-201ENST00000390236 83 ntBASIC30.18■■■□□ 2.42
RAD9AQ99638 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAD9AQ99638 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.16■■■□□ 2.42
RAD9AQ99638 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAD9AQ99638 AC005559.1-201ENST00000589661 871 ntBASIC30.13■■■□□ 2.41
RAD9AQ99638 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RAD9AQ99638 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
RAD9AQ99638 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.11■■■□□ 2.41
RAD9AQ99638 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.09■■■□□ 2.41
RAD9AQ99638 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.09■■■□□ 2.41
RAD9AQ99638 HLA-V-202ENST00000446817 847 ntBASIC30.07■■■□□ 2.4
RAD9AQ99638 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.07■■■□□ 2.4
RAD9AQ99638 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAD9AQ99638 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.06■■■□□ 2.4
RAD9AQ99638 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.06■■■□□ 2.4
RAD9AQ99638 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.05■■■□□ 2.4
RAD9AQ99638 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
RAD9AQ99638 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
RAD9AQ99638 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.02■■■□□ 2.4
RAD9AQ99638 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.02■■■□□ 2.4
RAD9AQ99638 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAD9AQ99638 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAD9AQ99638 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.39
RAD9AQ99638 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RAD9AQ99638 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30■■■□□ 2.39
RAD9AQ99638 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RAD9AQ99638 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RAD9AQ99638 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RAD9AQ99638 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.99■■■□□ 2.39
RAD9AQ99638 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RAD9AQ99638 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RAD9AQ99638 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.94■■■□□ 2.38
RAD9AQ99638 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.94■■■□□ 2.38
RAD9AQ99638 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.94■■■□□ 2.38
RAD9AQ99638 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RAD9AQ99638 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.93■■■□□ 2.38
RAD9AQ99638 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.93■■■□□ 2.38
RAD9AQ99638 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RAD9AQ99638 ZNRF2P2-203ENST00000454624 420 ntBASIC29.92■■■□□ 2.38
RAD9AQ99638 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
RAD9AQ99638 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RAD9AQ99638 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.91■■■□□ 2.38
RAD9AQ99638 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
RAD9AQ99638 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RAD9AQ99638 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RAD9AQ99638 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.85■■■□□ 2.37
RAD9AQ99638 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RAD9AQ99638 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
RAD9AQ99638 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.83■■■□□ 2.37
RAD9AQ99638 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.82■■■□□ 2.36
RAD9AQ99638 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.8■■■□□ 2.36
RAD9AQ99638 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.79■■■□□ 2.36
RAD9AQ99638 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms