Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRNP40Q96DI7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNRNP40Q96DI7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNRNP40Q96DI7 AL133380.1-201ENST00000506013 324 ntBASIC25.56■■□□□ 1.68
SNRNP40Q96DI7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SNRNP40Q96DI7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SNRNP40Q96DI7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.53■■□□□ 1.68
SNRNP40Q96DI7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SNRNP40Q96DI7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SNRNP40Q96DI7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
SNRNP40Q96DI7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.51■■□□□ 1.67
SNRNP40Q96DI7 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.48■■□□□ 1.67
SNRNP40Q96DI7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SNRNP40Q96DI7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.47■■□□□ 1.67
SNRNP40Q96DI7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SNRNP40Q96DI7 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.44■■□□□ 1.66
SNRNP40Q96DI7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.43■■□□□ 1.66
SNRNP40Q96DI7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.43■■□□□ 1.66
SNRNP40Q96DI7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SNRNP40Q96DI7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRNP40Q96DI7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SNRNP40Q96DI7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SNRNP40Q96DI7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SNRNP40Q96DI7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SNRNP40Q96DI7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
SNRNP40Q96DI7 MIR3665-201ENST00000578708 105 ntBASIC25.39■■□□□ 1.66
SNRNP40Q96DI7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.39■■□□□ 1.65
SNRNP40Q96DI7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.38■■□□□ 1.65
SNRNP40Q96DI7 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNRNP40Q96DI7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.37■■□□□ 1.65
SNRNP40Q96DI7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.36■■□□□ 1.65
SNRNP40Q96DI7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.36■■□□□ 1.65
SNRNP40Q96DI7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNRNP40Q96DI7 ABHD17AP4-201ENST00000411545 909 ntBASIC25.33■■□□□ 1.65
SNRNP40Q96DI7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SNRNP40Q96DI7 MIR7108-201ENST00000614319 87 ntBASIC25.31■■□□□ 1.64
SNRNP40Q96DI7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SNRNP40Q96DI7 AC087741.3-201ENST00000624270 1347 ntBASIC25.28■■□□□ 1.64
SNRNP40Q96DI7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SNRNP40Q96DI7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SNRNP40Q96DI7 DUX4L28-201ENST00000623687 678 ntBASIC25.25■■□□□ 1.63
SNRNP40Q96DI7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.24■■□□□ 1.63
SNRNP40Q96DI7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.24■■□□□ 1.63
SNRNP40Q96DI7 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.23■■□□□ 1.63
SNRNP40Q96DI7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SNRNP40Q96DI7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.22■■□□□ 1.63
SNRNP40Q96DI7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SNRNP40Q96DI7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.22■■□□□ 1.63
SNRNP40Q96DI7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SNRNP40Q96DI7 MIR762-201ENST00000390236 83 ntBASIC25.2■■□□□ 1.62
SNRNP40Q96DI7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.2■■□□□ 1.62
SNRNP40Q96DI7 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRNP40Q96DI7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SNRNP40Q96DI7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SNRNP40Q96DI7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.19■■□□□ 1.62
SNRNP40Q96DI7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNRNP40Q96DI7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SNRNP40Q96DI7 AC044849.2-201ENST00000606596 710 ntBASIC25.17■■□□□ 1.62
SNRNP40Q96DI7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.17■■□□□ 1.62
SNRNP40Q96DI7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SNRNP40Q96DI7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SNRNP40Q96DI7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.15■■□□□ 1.62
SNRNP40Q96DI7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SNRNP40Q96DI7 AC005559.1-201ENST00000589661 871 ntBASIC25.15■■□□□ 1.62
SNRNP40Q96DI7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.12■■□□□ 1.61
SNRNP40Q96DI7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNRNP40Q96DI7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.11■■□□□ 1.61
SNRNP40Q96DI7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.11■■□□□ 1.61
SNRNP40Q96DI7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNRNP40Q96DI7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.08■■□□□ 1.61
SNRNP40Q96DI7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNRNP40Q96DI7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SNRNP40Q96DI7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SNRNP40Q96DI7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNRNP40Q96DI7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SNRNP40Q96DI7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP40Q96DI7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP40Q96DI7 HLA-V-202ENST00000446817 847 ntBASIC25.04■■□□□ 1.6
SNRNP40Q96DI7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.02■■□□□ 1.6
SNRNP40Q96DI7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.02■■□□□ 1.6
SNRNP40Q96DI7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SNRNP40Q96DI7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.99■■□□□ 1.59
SNRNP40Q96DI7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SNRNP40Q96DI7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
SNRNP40Q96DI7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP40Q96DI7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.97■■□□□ 1.59
SNRNP40Q96DI7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.97■■□□□ 1.59
SNRNP40Q96DI7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.97■■□□□ 1.59
SNRNP40Q96DI7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.96■■□□□ 1.59
SNRNP40Q96DI7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SNRNP40Q96DI7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.95■■□□□ 1.58
SNRNP40Q96DI7 ZNRF2P2-203ENST00000454624 420 ntBASIC24.95■■□□□ 1.58
SNRNP40Q96DI7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SNRNP40Q96DI7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms