Protein–RNA interactions for Protein: Q92538

GBF1, Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, humanhuman

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1Q92538 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
GBF1Q92538 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
GBF1Q92538 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.73■■■□□ 2.51
GBF1Q92538 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
GBF1Q92538 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
GBF1Q92538 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
GBF1Q92538 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.68■■■□□ 2.5
GBF1Q92538 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.67■■■□□ 2.5
GBF1Q92538 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
GBF1Q92538 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.67■■■□□ 2.5
GBF1Q92538 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GBF1Q92538 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
GBF1Q92538 DUX4L28-201ENST00000623687 678 ntBASIC30.65■■■□□ 2.5
GBF1Q92538 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.65■■■□□ 2.5
GBF1Q92538 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
GBF1Q92538 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
GBF1Q92538 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
GBF1Q92538 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
GBF1Q92538 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.63■■■□□ 2.49
GBF1Q92538 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.63■■■□□ 2.49
GBF1Q92538 ABHD17AP4-201ENST00000411545 909 ntBASIC30.62■■■□□ 2.49
GBF1Q92538 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.61■■■□□ 2.49
GBF1Q92538 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.61■■■□□ 2.49
GBF1Q92538 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
GBF1Q92538 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.59■■■□□ 2.49
GBF1Q92538 AC044849.2-201ENST00000606596 710 ntBASIC30.59■■■□□ 2.49
GBF1Q92538 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.57■■■□□ 2.48
GBF1Q92538 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.57■■■□□ 2.48
GBF1Q92538 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
GBF1Q92538 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.57■■■□□ 2.48
GBF1Q92538 MIR3665-201ENST00000578708 105 ntBASIC30.56■■■□□ 2.48
GBF1Q92538 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.54■■■□□ 2.48
GBF1Q92538 AC087741.3-201ENST00000624270 1347 ntBASIC30.54■■■□□ 2.48
GBF1Q92538 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
GBF1Q92538 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
GBF1Q92538 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.5■■■□□ 2.47
GBF1Q92538 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.49■■■□□ 2.47
GBF1Q92538 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
GBF1Q92538 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
GBF1Q92538 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
GBF1Q92538 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.42■■■□□ 2.46
GBF1Q92538 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
GBF1Q92538 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
GBF1Q92538 AC005559.1-201ENST00000589661 871 ntBASIC30.39■■■□□ 2.46
GBF1Q92538 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.38■■■□□ 2.45
GBF1Q92538 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.37■■■□□ 2.45
GBF1Q92538 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
GBF1Q92538 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.34■■■□□ 2.45
GBF1Q92538 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
GBF1Q92538 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
GBF1Q92538 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.32■■■□□ 2.44
GBF1Q92538 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.31■■■□□ 2.44
GBF1Q92538 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
GBF1Q92538 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
GBF1Q92538 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.29■■■□□ 2.44
GBF1Q92538 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
GBF1Q92538 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
GBF1Q92538 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
GBF1Q92538 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.27■■■□□ 2.44
GBF1Q92538 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.27■■■□□ 2.44
GBF1Q92538 MIR762-201ENST00000390236 83 ntBASIC30.25■■■□□ 2.43
GBF1Q92538 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
GBF1Q92538 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
GBF1Q92538 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.25■■■□□ 2.43
GBF1Q92538 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
GBF1Q92538 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.21■■■□□ 2.43
GBF1Q92538 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.21■■■□□ 2.43
GBF1Q92538 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.2■■■□□ 2.42
GBF1Q92538 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.19■■■□□ 2.42
GBF1Q92538 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.18■■■□□ 2.42
GBF1Q92538 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
GBF1Q92538 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
GBF1Q92538 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.16■■■□□ 2.42
GBF1Q92538 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
GBF1Q92538 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
GBF1Q92538 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.14■■■□□ 2.42
GBF1Q92538 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
GBF1Q92538 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
GBF1Q92538 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
GBF1Q92538 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.13■■■□□ 2.41
GBF1Q92538 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.12■■■□□ 2.41
GBF1Q92538 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
GBF1Q92538 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.09■■■□□ 2.41
GBF1Q92538 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
GBF1Q92538 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.08■■■□□ 2.41
GBF1Q92538 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.06■■■□□ 2.4
GBF1Q92538 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
GBF1Q92538 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.04■■■□□ 2.4
GBF1Q92538 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
GBF1Q92538 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.04■■■□□ 2.4
GBF1Q92538 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
GBF1Q92538 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.01■■■□□ 2.39
GBF1Q92538 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.01■■■□□ 2.39
GBF1Q92538 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.01■■■□□ 2.39
GBF1Q92538 ZNRF2P2-203ENST00000454624 420 ntBASIC29.99■■■□□ 2.39
GBF1Q92538 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
GBF1Q92538 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.99■■■□□ 2.39
GBF1Q92538 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
GBF1Q92538 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
GBF1Q92538 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.95■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms