Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LINC01561Q8N1V8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.67■□□□□ 0.58
LINC01561Q8N1V8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LINC01561Q8N1V8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01561Q8N1V8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01561Q8N1V8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LINC01561Q8N1V8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01561Q8N1V8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01561Q8N1V8 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01561Q8N1V8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01561Q8N1V8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01561Q8N1V8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LINC01561Q8N1V8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC01561Q8N1V8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01561Q8N1V8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01561Q8N1V8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC01561Q8N1V8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC01561Q8N1V8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC01561Q8N1V8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.58■□□□□ 0.57
LINC01561Q8N1V8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.57■□□□□ 0.56
LINC01561Q8N1V8 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01561Q8N1V8 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC01561Q8N1V8 AC120057.4-201ENST00000624722 1615 ntBASIC18.56■□□□□ 0.56
LINC01561Q8N1V8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LINC01561Q8N1V8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.52■□□□□ 0.56
LINC01561Q8N1V8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01561Q8N1V8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01561Q8N1V8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01561Q8N1V8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.52■□□□□ 0.55
LINC01561Q8N1V8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01561Q8N1V8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01561Q8N1V8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01561Q8N1V8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.5■□□□□ 0.55
LINC01561Q8N1V8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01561Q8N1V8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
LINC01561Q8N1V8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01561Q8N1V8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01561Q8N1V8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01561Q8N1V8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01561Q8N1V8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01561Q8N1V8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01561Q8N1V8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01561Q8N1V8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.45■□□□□ 0.54
LINC01561Q8N1V8 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.45■□□□□ 0.54
LINC01561Q8N1V8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LINC01561Q8N1V8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01561Q8N1V8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LINC01561Q8N1V8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.43■□□□□ 0.54
LINC01561Q8N1V8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LINC01561Q8N1V8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC01561Q8N1V8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01561Q8N1V8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC01561Q8N1V8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC01561Q8N1V8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC01561Q8N1V8 AL161658.1-201ENST00000623641 1967 ntBASIC18.4■□□□□ 0.54
LINC01561Q8N1V8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC01561Q8N1V8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LINC01561Q8N1V8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC01561Q8N1V8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC01561Q8N1V8 AC006077.2-201ENST00000623591 457 ntBASIC18.36■□□□□ 0.53
LINC01561Q8N1V8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01561Q8N1V8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC01561Q8N1V8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LINC01561Q8N1V8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC01561Q8N1V8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC01561Q8N1V8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
LINC01561Q8N1V8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01561Q8N1V8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC01561Q8N1V8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC01561Q8N1V8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01561Q8N1V8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01561Q8N1V8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC01561Q8N1V8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01561Q8N1V8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LINC01561Q8N1V8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC01561Q8N1V8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.3■□□□□ 0.52
LINC01561Q8N1V8 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.3■□□□□ 0.52
LINC01561Q8N1V8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01561Q8N1V8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC01561Q8N1V8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01561Q8N1V8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC01561Q8N1V8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINC01561Q8N1V8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.26■□□□□ 0.51
LINC01561Q8N1V8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01561Q8N1V8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01561Q8N1V8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC01561Q8N1V8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01561Q8N1V8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC01561Q8N1V8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01561Q8N1V8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LINC01561Q8N1V8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC01561Q8N1V8 ABCB10P1-201ENST00000614297 2181 ntBASIC18.24■□□□□ 0.51
LINC01561Q8N1V8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01561Q8N1V8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.23■□□□□ 0.51
LINC01561Q8N1V8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01561Q8N1V8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC01561Q8N1V8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01561Q8N1V8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC01561Q8N1V8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC01561Q8N1V8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms