Protein–RNA interactions for Protein: Q7Z2R9

SSBP3-AS1, Putative uncharacterized protein SSBP3-AS1, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-AS1Q7Z2R9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SSBP3-AS1Q7Z2R9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSBP3-AS1Q7Z2R9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
SSBP3-AS1Q7Z2R9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSBP3-AS1Q7Z2R9 AP002365.1-201ENST00000603448 772 ntBASIC16.37■□□□□ 0.21
SSBP3-AS1Q7Z2R9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSBP3-AS1Q7Z2R9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SSBP3-AS1Q7Z2R9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSBP3-AS1Q7Z2R9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC16.36■□□□□ 0.21
SSBP3-AS1Q7Z2R9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SSBP3-AS1Q7Z2R9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SSBP3-AS1Q7Z2R9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.34■□□□□ 0.21
SSBP3-AS1Q7Z2R9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SSBP3-AS1Q7Z2R9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SSBP3-AS1Q7Z2R9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3-AS1Q7Z2R9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC16.32■□□□□ 0.2
SSBP3-AS1Q7Z2R9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSBP3-AS1Q7Z2R9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3-AS1Q7Z2R9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3-AS1Q7Z2R9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSBP3-AS1Q7Z2R9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC16.3■□□□□ 0.2
SSBP3-AS1Q7Z2R9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3-AS1Q7Z2R9 AL031258.1-201ENST00000623562 325 ntBASIC16.3■□□□□ 0.2
SSBP3-AS1Q7Z2R9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3-AS1Q7Z2R9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSBP3-AS1Q7Z2R9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC16.3■□□□□ 0.2
SSBP3-AS1Q7Z2R9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3-AS1Q7Z2R9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC16.29■□□□□ 0.2
SSBP3-AS1Q7Z2R9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SSBP3-AS1Q7Z2R9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SSBP3-AS1Q7Z2R9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3-AS1Q7Z2R9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SSBP3-AS1Q7Z2R9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC16.28■□□□□ 0.2
SSBP3-AS1Q7Z2R9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSBP3-AS1Q7Z2R9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SSBP3-AS1Q7Z2R9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC16.26■□□□□ 0.19
SSBP3-AS1Q7Z2R9 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC16.26■□□□□ 0.19
SSBP3-AS1Q7Z2R9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC16.26■□□□□ 0.19
SSBP3-AS1Q7Z2R9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSBP3-AS1Q7Z2R9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSBP3-AS1Q7Z2R9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSBP3-AS1Q7Z2R9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSBP3-AS1Q7Z2R9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SSBP3-AS1Q7Z2R9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSBP3-AS1Q7Z2R9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16.23■□□□□ 0.19
SSBP3-AS1Q7Z2R9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSBP3-AS1Q7Z2R9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSBP3-AS1Q7Z2R9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3-AS1Q7Z2R9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3-AS1Q7Z2R9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SSBP3-AS1Q7Z2R9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3-AS1Q7Z2R9 AC120057.4-201ENST00000624722 1615 ntBASIC16.17■□□□□ 0.18
SSBP3-AS1Q7Z2R9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.17■□□□□ 0.18
SSBP3-AS1Q7Z2R9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3-AS1Q7Z2R9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SSBP3-AS1Q7Z2R9 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SSBP3-AS1Q7Z2R9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SSBP3-AS1Q7Z2R9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SSBP3-AS1Q7Z2R9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC16.16■□□□□ 0.18
SSBP3-AS1Q7Z2R9 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC16.15■□□□□ 0.18
SSBP3-AS1Q7Z2R9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SSBP3-AS1Q7Z2R9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSBP3-AS1Q7Z2R9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSBP3-AS1Q7Z2R9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SSBP3-AS1Q7Z2R9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC16.14■□□□□ 0.18
SSBP3-AS1Q7Z2R9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSBP3-AS1Q7Z2R9 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSBP3-AS1Q7Z2R9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SSBP3-AS1Q7Z2R9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SSBP3-AS1Q7Z2R9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
SSBP3-AS1Q7Z2R9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3-AS1Q7Z2R9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3-AS1Q7Z2R9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSBP3-AS1Q7Z2R9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC16.11■□□□□ 0.17
SSBP3-AS1Q7Z2R9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3-AS1Q7Z2R9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.1■□□□□ 0.17
SSBP3-AS1Q7Z2R9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSBP3-AS1Q7Z2R9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SSBP3-AS1Q7Z2R9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.08■□□□□ 0.16
SSBP3-AS1Q7Z2R9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.08■□□□□ 0.16
SSBP3-AS1Q7Z2R9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.08■□□□□ 0.16
SSBP3-AS1Q7Z2R9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.08■□□□□ 0.16
SSBP3-AS1Q7Z2R9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.08■□□□□ 0.16
SSBP3-AS1Q7Z2R9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC16.07■□□□□ 0.16
SSBP3-AS1Q7Z2R9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC16.07■□□□□ 0.16
SSBP3-AS1Q7Z2R9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSBP3-AS1Q7Z2R9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC16.07■□□□□ 0.16
SSBP3-AS1Q7Z2R9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SSBP3-AS1Q7Z2R9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SSBP3-AS1Q7Z2R9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC16.04■□□□□ 0.16
SSBP3-AS1Q7Z2R9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SSBP3-AS1Q7Z2R9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.02■□□□□ 0.16
SSBP3-AS1Q7Z2R9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SSBP3-AS1Q7Z2R9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms