Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LRRC55Q6ZSA7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LRRC55Q6ZSA7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LRRC55Q6ZSA7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LRRC55Q6ZSA7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
LRRC55Q6ZSA7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.98■■■□□ 2.55
LRRC55Q6ZSA7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.98■■■□□ 2.55
LRRC55Q6ZSA7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LRRC55Q6ZSA7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
LRRC55Q6ZSA7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
LRRC55Q6ZSA7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.95■■■□□ 2.55
LRRC55Q6ZSA7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.95■■■□□ 2.55
LRRC55Q6ZSA7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
LRRC55Q6ZSA7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.92■■■□□ 2.54
LRRC55Q6ZSA7 AC097358.2-201ENST00000607541 1159 ntBASIC30.92■■■□□ 2.54
LRRC55Q6ZSA7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
LRRC55Q6ZSA7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
LRRC55Q6ZSA7 AC136428.2-201ENST00000563187 214 ntBASIC30.9■■■□□ 2.54
LRRC55Q6ZSA7 SETD8P1-201ENST00000623146 1180 ntBASIC30.89■■■□□ 2.54
LRRC55Q6ZSA7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
LRRC55Q6ZSA7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
LRRC55Q6ZSA7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.88■■■□□ 2.53
LRRC55Q6ZSA7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.88■■■□□ 2.53
LRRC55Q6ZSA7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.87■■■□□ 2.53
LRRC55Q6ZSA7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LRRC55Q6ZSA7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.86■■■□□ 2.53
LRRC55Q6ZSA7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LRRC55Q6ZSA7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.85■■■□□ 2.53
LRRC55Q6ZSA7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
LRRC55Q6ZSA7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
LRRC55Q6ZSA7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.82■■■□□ 2.52
LRRC55Q6ZSA7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
LRRC55Q6ZSA7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.8■■■□□ 2.52
LRRC55Q6ZSA7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.79■■■□□ 2.52
LRRC55Q6ZSA7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
LRRC55Q6ZSA7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
LRRC55Q6ZSA7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LRRC55Q6ZSA7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
LRRC55Q6ZSA7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
LRRC55Q6ZSA7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
LRRC55Q6ZSA7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LRRC55Q6ZSA7 SUZ12P1-203ENST00000578195 985 ntBASIC30.73■■■□□ 2.51
LRRC55Q6ZSA7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.72■■■□□ 2.51
LRRC55Q6ZSA7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LRRC55Q6ZSA7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.71■■■□□ 2.51
LRRC55Q6ZSA7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LRRC55Q6ZSA7 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.69■■■□□ 2.5
LRRC55Q6ZSA7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.69■■■□□ 2.5
LRRC55Q6ZSA7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
LRRC55Q6ZSA7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.68■■■□□ 2.5
LRRC55Q6ZSA7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
LRRC55Q6ZSA7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
LRRC55Q6ZSA7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
LRRC55Q6ZSA7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
LRRC55Q6ZSA7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.65■■■□□ 2.5
LRRC55Q6ZSA7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
LRRC55Q6ZSA7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC55Q6ZSA7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.62■■■□□ 2.49
LRRC55Q6ZSA7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
LRRC55Q6ZSA7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LRRC55Q6ZSA7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.61■■■□□ 2.49
LRRC55Q6ZSA7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LRRC55Q6ZSA7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
LRRC55Q6ZSA7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
LRRC55Q6ZSA7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
LRRC55Q6ZSA7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LRRC55Q6ZSA7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.56■■■□□ 2.48
LRRC55Q6ZSA7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.55■■■□□ 2.48
LRRC55Q6ZSA7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LRRC55Q6ZSA7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LRRC55Q6ZSA7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.53■■■□□ 2.48
LRRC55Q6ZSA7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.53■■■□□ 2.48
LRRC55Q6ZSA7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
LRRC55Q6ZSA7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
LRRC55Q6ZSA7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
LRRC55Q6ZSA7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.51■■■□□ 2.47
LRRC55Q6ZSA7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
LRRC55Q6ZSA7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LRRC55Q6ZSA7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LRRC55Q6ZSA7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
LRRC55Q6ZSA7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LRRC55Q6ZSA7 CAHM-201ENST00000604200 896 ntBASIC30.47■■■□□ 2.47
LRRC55Q6ZSA7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LRRC55Q6ZSA7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.47■■■□□ 2.47
LRRC55Q6ZSA7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
LRRC55Q6ZSA7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LRRC55Q6ZSA7 RPS2P35-201ENST00000443417 897 ntBASIC30.45■■■□□ 2.47
LRRC55Q6ZSA7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
LRRC55Q6ZSA7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
LRRC55Q6ZSA7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.44■■■□□ 2.46
LRRC55Q6ZSA7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.44■■■□□ 2.46
LRRC55Q6ZSA7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LRRC55Q6ZSA7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
LRRC55Q6ZSA7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LRRC55Q6ZSA7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
LRRC55Q6ZSA7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.4■■■□□ 2.46
LRRC55Q6ZSA7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.4■■■□□ 2.46
LRRC55Q6ZSA7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.45
LRRC55Q6ZSA7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LRRC55Q6ZSA7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms