Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VMA21Q3ZAQ7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VMA21Q3ZAQ7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.32■■□□□ 1.16
VMA21Q3ZAQ7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
VMA21Q3ZAQ7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
VMA21Q3ZAQ7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
VMA21Q3ZAQ7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VMA21Q3ZAQ7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VMA21Q3ZAQ7 DYNLL1-208ENST00000550178 581 ntBASIC22.3■■□□□ 1.16
VMA21Q3ZAQ7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
VMA21Q3ZAQ7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
VMA21Q3ZAQ7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VMA21Q3ZAQ7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VMA21Q3ZAQ7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
VMA21Q3ZAQ7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
VMA21Q3ZAQ7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VMA21Q3ZAQ7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VMA21Q3ZAQ7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VMA21Q3ZAQ7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
VMA21Q3ZAQ7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
VMA21Q3ZAQ7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VMA21Q3ZAQ7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.24■■□□□ 1.15
VMA21Q3ZAQ7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.24■■□□□ 1.15
VMA21Q3ZAQ7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
VMA21Q3ZAQ7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.24■■□□□ 1.15
VMA21Q3ZAQ7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VMA21Q3ZAQ7 AP002365.1-201ENST00000603448 772 ntBASIC22.22■■□□□ 1.15
VMA21Q3ZAQ7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.21■■□□□ 1.15
VMA21Q3ZAQ7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.19■■□□□ 1.14
VMA21Q3ZAQ7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.19■■□□□ 1.14
VMA21Q3ZAQ7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
VMA21Q3ZAQ7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VMA21Q3ZAQ7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VMA21Q3ZAQ7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VMA21Q3ZAQ7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VMA21Q3ZAQ7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.16■■□□□ 1.14
VMA21Q3ZAQ7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VMA21Q3ZAQ7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VMA21Q3ZAQ7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VMA21Q3ZAQ7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VMA21Q3ZAQ7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VMA21Q3ZAQ7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VMA21Q3ZAQ7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.15■■□□□ 1.14
VMA21Q3ZAQ7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.14
VMA21Q3ZAQ7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
VMA21Q3ZAQ7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
VMA21Q3ZAQ7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VMA21Q3ZAQ7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.13■■□□□ 1.13
VMA21Q3ZAQ7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
VMA21Q3ZAQ7 AL031258.1-201ENST00000623562 325 ntBASIC22.13■■□□□ 1.13
VMA21Q3ZAQ7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VMA21Q3ZAQ7 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VMA21Q3ZAQ7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.12■■□□□ 1.13
VMA21Q3ZAQ7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.12■■□□□ 1.13
VMA21Q3ZAQ7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VMA21Q3ZAQ7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
VMA21Q3ZAQ7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
VMA21Q3ZAQ7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VMA21Q3ZAQ7 AC120057.4-201ENST00000624722 1615 ntBASIC22.09■■□□□ 1.13
VMA21Q3ZAQ7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VMA21Q3ZAQ7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VMA21Q3ZAQ7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.08■■□□□ 1.12
VMA21Q3ZAQ7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.07■■□□□ 1.12
VMA21Q3ZAQ7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VMA21Q3ZAQ7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.06■■□□□ 1.12
VMA21Q3ZAQ7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
VMA21Q3ZAQ7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.06■■□□□ 1.12
VMA21Q3ZAQ7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.06■■□□□ 1.12
VMA21Q3ZAQ7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VMA21Q3ZAQ7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VMA21Q3ZAQ7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VMA21Q3ZAQ7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
VMA21Q3ZAQ7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.01■■□□□ 1.11
VMA21Q3ZAQ7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
VMA21Q3ZAQ7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VMA21Q3ZAQ7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.99■■□□□ 1.11
VMA21Q3ZAQ7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VMA21Q3ZAQ7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.98■■□□□ 1.11
VMA21Q3ZAQ7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
VMA21Q3ZAQ7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VMA21Q3ZAQ7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.98■■□□□ 1.11
VMA21Q3ZAQ7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VMA21Q3ZAQ7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VMA21Q3ZAQ7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VMA21Q3ZAQ7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VMA21Q3ZAQ7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VMA21Q3ZAQ7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VMA21Q3ZAQ7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VMA21Q3ZAQ7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VMA21Q3ZAQ7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
VMA21Q3ZAQ7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VMA21Q3ZAQ7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VMA21Q3ZAQ7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VMA21Q3ZAQ7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VMA21Q3ZAQ7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.88■■□□□ 1.09
VMA21Q3ZAQ7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.88■■□□□ 1.09
VMA21Q3ZAQ7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VMA21Q3ZAQ7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VMA21Q3ZAQ7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VMA21Q3ZAQ7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms