Protein–RNA interactions for Protein: O00411

POLRMT, DNA-directed RNA polymerase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLRMTO00411 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
POLRMTO00411 AL133380.1-201ENST00000506013 324 ntBASIC35.74■■■■□ 3.31
POLRMTO00411 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.71■■■■□ 3.31
POLRMTO00411 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.71■■■■□ 3.31
POLRMTO00411 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC35.71■■■■□ 3.31
POLRMTO00411 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC35.7■■■■□ 3.31
POLRMTO00411 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
POLRMTO00411 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
POLRMTO00411 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.65■■■■□ 3.3
POLRMTO00411 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
POLRMTO00411 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
POLRMTO00411 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
POLRMTO00411 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.56■■■■□ 3.28
POLRMTO00411 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC35.52■■■■□ 3.28
POLRMTO00411 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC35.52■■■■□ 3.28
POLRMTO00411 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
POLRMTO00411 EBPL-202ENST00000378268 680 ntTSL 3 BASIC35.51■■■■□ 3.28
POLRMTO00411 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.51■■■■□ 3.28
POLRMTO00411 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
POLRMTO00411 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.49■■■■□ 3.27
POLRMTO00411 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
POLRMTO00411 ABHD17AP4-201ENST00000411545 909 ntBASIC35.47■■■■□ 3.27
POLRMTO00411 MIR3665-201ENST00000578708 105 ntBASIC35.46■■■■□ 3.27
POLRMTO00411 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC35.45■■■■□ 3.27
POLRMTO00411 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC35.45■■■■□ 3.27
POLRMTO00411 MIR7108-201ENST00000614319 87 ntBASIC35.44■■■■□ 3.26
POLRMTO00411 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC35.41■■■■□ 3.26
POLRMTO00411 AC087741.3-201ENST00000624270 1347 ntBASIC35.39■■■■□ 3.26
POLRMTO00411 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
POLRMTO00411 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
POLRMTO00411 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
POLRMTO00411 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
POLRMTO00411 DUX4L28-201ENST00000623687 678 ntBASIC35.36■■■■□ 3.25
POLRMTO00411 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
POLRMTO00411 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
POLRMTO00411 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
POLRMTO00411 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC35.33■■■■□ 3.25
POLRMTO00411 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.33■■■■□ 3.25
POLRMTO00411 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
POLRMTO00411 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
POLRMTO00411 MLEC-202ENST00000412616 841 ntTSL 3 BASIC35.28■■■■□ 3.24
POLRMTO00411 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
POLRMTO00411 PVT1-219ENST00000523427 938 ntTSL 3 BASIC35.26■■■■□ 3.24
POLRMTO00411 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC35.24■■■■□ 3.23
POLRMTO00411 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.24■■■■□ 3.23
POLRMTO00411 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
POLRMTO00411 MIR762-201ENST00000390236 83 ntBASIC35.22■■■■□ 3.23
POLRMTO00411 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC35.22■■■■□ 3.23
POLRMTO00411 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC35.19■■■■□ 3.22
POLRMTO00411 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
POLRMTO00411 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.17■■■■□ 3.22
POLRMTO00411 AC044849.2-201ENST00000606596 710 ntBASIC35.17■■■■□ 3.22
POLRMTO00411 AC005559.1-201ENST00000589661 871 ntBASIC35.12■■■■□ 3.21
POLRMTO00411 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
POLRMTO00411 MBP-237ENST00000579129 1052 ntTSL 5 BASIC35.11■■■■□ 3.21
POLRMTO00411 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
POLRMTO00411 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC35.1■■■■□ 3.21
POLRMTO00411 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
POLRMTO00411 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC35.07■■■■□ 3.2
POLRMTO00411 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.2
POLRMTO00411 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.07■■■■□ 3.2
POLRMTO00411 HLA-V-202ENST00000446817 847 ntBASIC35.06■■■■□ 3.2
POLRMTO00411 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC35.05■■■■□ 3.2
POLRMTO00411 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC35.05■■■■□ 3.2
POLRMTO00411 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
POLRMTO00411 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC35.04■■■■□ 3.2
POLRMTO00411 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.04■■■■□ 3.2
POLRMTO00411 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.04■■■■□ 3.2
POLRMTO00411 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.03■■■■□ 3.2
POLRMTO00411 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
POLRMTO00411 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.02■■■■□ 3.2
POLRMTO00411 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC35.02■■■■□ 3.2
POLRMTO00411 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.01■■■■□ 3.19
POLRMTO00411 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
POLRMTO00411 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
POLRMTO00411 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
POLRMTO00411 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
POLRMTO00411 DENR-202ENST00000455982 1052 ntTSL 5 BASIC34.93■■■■□ 3.18
POLRMTO00411 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
POLRMTO00411 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
POLRMTO00411 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
POLRMTO00411 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
POLRMTO00411 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
POLRMTO00411 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC34.9■■■■□ 3.18
POLRMTO00411 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC34.9■■■■□ 3.18
POLRMTO00411 ZNRF2P2-203ENST00000454624 420 ntBASIC34.9■■■■□ 3.18
POLRMTO00411 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC34.89■■■■□ 3.18
POLRMTO00411 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC34.88■■■■□ 3.17
POLRMTO00411 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
POLRMTO00411 BOD1-206ENST00000480951 814 ntTSL 2 BASIC34.85■■■■□ 3.17
POLRMTO00411 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.85■■■■□ 3.17
POLRMTO00411 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC34.84■■■■□ 3.17
POLRMTO00411 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
POLRMTO00411 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
POLRMTO00411 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
POLRMTO00411 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
POLRMTO00411 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
POLRMTO00411 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
POLRMTO00411 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC34.79■■■■□ 3.16
POLRMTO00411 HGH1-207ENST00000628266 258 ntTSL 5 BASIC34.76■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms