Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
LINC01553A4QN01 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
LINC01553A4QN01 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
LINC01553A4QN01 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
LINC01553A4QN01 AL133380.1-201ENST00000506013 324 ntBASIC30.51■■■□□ 2.47
LINC01553A4QN01 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
LINC01553A4QN01 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.47■■■□□ 2.47
LINC01553A4QN01 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
LINC01553A4QN01 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LINC01553A4QN01 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LINC01553A4QN01 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
LINC01553A4QN01 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LINC01553A4QN01 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
LINC01553A4QN01 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.36■■■□□ 2.45
LINC01553A4QN01 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LINC01553A4QN01 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.34■■■□□ 2.45
LINC01553A4QN01 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
LINC01553A4QN01 ABHD17AP4-201ENST00000411545 909 ntBASIC30.33■■■□□ 2.45
LINC01553A4QN01 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.33■■■□□ 2.45
LINC01553A4QN01 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.33■■■□□ 2.45
LINC01553A4QN01 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.33■■■□□ 2.45
LINC01553A4QN01 MIR3665-201ENST00000578708 105 ntBASIC30.33■■■□□ 2.45
LINC01553A4QN01 MIR7108-201ENST00000614319 87 ntBASIC30.33■■■□□ 2.45
LINC01553A4QN01 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.32■■■□□ 2.44
LINC01553A4QN01 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.3■■■□□ 2.44
LINC01553A4QN01 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LINC01553A4QN01 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.26■■■□□ 2.43
LINC01553A4QN01 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LINC01553A4QN01 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
LINC01553A4QN01 AC087741.3-201ENST00000624270 1347 ntBASIC30.22■■■□□ 2.43
LINC01553A4QN01 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
LINC01553A4QN01 DUX4L28-201ENST00000623687 678 ntBASIC30.2■■■□□ 2.43
LINC01553A4QN01 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
LINC01553A4QN01 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.19■■■□□ 2.42
LINC01553A4QN01 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
LINC01553A4QN01 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.19■■■□□ 2.42
LINC01553A4QN01 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.18■■■□□ 2.42
LINC01553A4QN01 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LINC01553A4QN01 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
LINC01553A4QN01 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.18■■■□□ 2.42
LINC01553A4QN01 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LINC01553A4QN01 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.15■■■□□ 2.42
LINC01553A4QN01 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.11■■■□□ 2.41
LINC01553A4QN01 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.09■■■□□ 2.41
LINC01553A4QN01 MIR762-201ENST00000390236 83 ntBASIC30.09■■■□□ 2.41
LINC01553A4QN01 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
LINC01553A4QN01 AC044849.2-201ENST00000606596 710 ntBASIC30.08■■■□□ 2.41
LINC01553A4QN01 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
LINC01553A4QN01 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
LINC01553A4QN01 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
LINC01553A4QN01 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.06■■■□□ 2.4
LINC01553A4QN01 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.04■■■□□ 2.4
LINC01553A4QN01 HLA-V-202ENST00000446817 847 ntBASIC30.03■■■□□ 2.4
LINC01553A4QN01 AC005559.1-201ENST00000589661 871 ntBASIC30.02■■■□□ 2.4
LINC01553A4QN01 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
LINC01553A4QN01 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.99■■■□□ 2.39
LINC01553A4QN01 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
LINC01553A4QN01 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.97■■■□□ 2.39
LINC01553A4QN01 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
LINC01553A4QN01 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
LINC01553A4QN01 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC29.96■■■□□ 2.39
LINC01553A4QN01 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.96■■■□□ 2.39
LINC01553A4QN01 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
LINC01553A4QN01 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LINC01553A4QN01 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.93■■■□□ 2.38
LINC01553A4QN01 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
LINC01553A4QN01 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
LINC01553A4QN01 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.92■■■□□ 2.38
LINC01553A4QN01 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.9■■■□□ 2.38
LINC01553A4QN01 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.89■■■□□ 2.37
LINC01553A4QN01 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.88■■■□□ 2.37
LINC01553A4QN01 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
LINC01553A4QN01 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.85■■■□□ 2.37
LINC01553A4QN01 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.85■■■□□ 2.37
LINC01553A4QN01 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
LINC01553A4QN01 ZNRF2P2-203ENST00000454624 420 ntBASIC29.84■■■□□ 2.37
LINC01553A4QN01 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
LINC01553A4QN01 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
LINC01553A4QN01 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
LINC01553A4QN01 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.83■■■□□ 2.37
LINC01553A4QN01 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.83■■■□□ 2.37
LINC01553A4QN01 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.82■■■□□ 2.36
LINC01553A4QN01 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LINC01553A4QN01 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.81■■■□□ 2.36
LINC01553A4QN01 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.81■■■□□ 2.36
LINC01553A4QN01 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LINC01553A4QN01 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.8■■■□□ 2.36
LINC01553A4QN01 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LINC01553A4QN01 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.78■■■□□ 2.36
LINC01553A4QN01 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LINC01553A4QN01 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LINC01553A4QN01 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LINC01553A4QN01 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.76■■■□□ 2.35
LINC01553A4QN01 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
LINC01553A4QN01 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.73■■■□□ 2.35
LINC01553A4QN01 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
LINC01553A4QN01 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.69■■■□□ 2.34
LINC01553A4QN01 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LINC01553A4QN01 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
LINC01553A4QN01 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms