Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LCE6AA0A183 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.81■□□□□ 0.76
LCE6AA0A183 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.8■□□□□ 0.76
LCE6AA0A183 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.8■□□□□ 0.76
LCE6AA0A183 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.78■□□□□ 0.76
LCE6AA0A183 AC087741.3-201ENST00000624270 1347 ntBASIC19.77■□□□□ 0.76
LCE6AA0A183 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.75■□□□□ 0.75
LCE6AA0A183 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.75■□□□□ 0.75
LCE6AA0A183 AC044849.2-201ENST00000606596 710 ntBASIC19.75■□□□□ 0.75
LCE6AA0A183 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LCE6AA0A183 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LCE6AA0A183 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.74■□□□□ 0.75
LCE6AA0A183 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LCE6AA0A183 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
LCE6AA0A183 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LCE6AA0A183 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
LCE6AA0A183 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.69■□□□□ 0.74
LCE6AA0A183 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.69■□□□□ 0.74
LCE6AA0A183 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LCE6AA0A183 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.68■□□□□ 0.74
LCE6AA0A183 DUX4L28-201ENST00000623687 678 ntBASIC19.67■□□□□ 0.74
LCE6AA0A183 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.65■□□□□ 0.74
LCE6AA0A183 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.65■□□□□ 0.74
LCE6AA0A183 ZNRF2P2-203ENST00000454624 420 ntBASIC19.65■□□□□ 0.74
LCE6AA0A183 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LCE6AA0A183 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LCE6AA0A183 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
LCE6AA0A183 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LCE6AA0A183 AL133380.1-201ENST00000506013 324 ntBASIC19.63■□□□□ 0.73
LCE6AA0A183 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LCE6AA0A183 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.62■□□□□ 0.73
LCE6AA0A183 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LCE6AA0A183 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.62■□□□□ 0.73
LCE6AA0A183 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LCE6AA0A183 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LCE6AA0A183 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.59■□□□□ 0.73
LCE6AA0A183 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LCE6AA0A183 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
LCE6AA0A183 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LCE6AA0A183 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.57■□□□□ 0.72
LCE6AA0A183 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LCE6AA0A183 MIR4449-201ENST00000578365 66 ntBASIC19.56■□□□□ 0.72
LCE6AA0A183 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LCE6AA0A183 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LCE6AA0A183 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LCE6AA0A183 AC005559.1-201ENST00000589661 871 ntBASIC19.54■□□□□ 0.72
LCE6AA0A183 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.53■□□□□ 0.72
LCE6AA0A183 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCE6AA0A183 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LCE6AA0A183 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.52■□□□□ 0.72
LCE6AA0A183 MIR762-201ENST00000390236 83 ntBASIC19.51■□□□□ 0.71
LCE6AA0A183 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.51■□□□□ 0.71
LCE6AA0A183 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.49■□□□□ 0.71
LCE6AA0A183 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LCE6AA0A183 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LCE6AA0A183 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.46■□□□□ 0.71
LCE6AA0A183 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCE6AA0A183 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCE6AA0A183 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.44■□□□□ 0.7
LCE6AA0A183 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCE6AA0A183 MIR639-201ENST00000384974 98 ntBASIC19.43■□□□□ 0.7
LCE6AA0A183 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCE6AA0A183 HSD17B1P1-201ENST00000590052 955 ntBASIC19.43■□□□□ 0.7
LCE6AA0A183 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.41■□□□□ 0.7
LCE6AA0A183 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCE6AA0A183 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LCE6AA0A183 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LCE6AA0A183 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LCE6AA0A183 AC145285.7-201ENST00000614819 1539 ntBASIC19.39■□□□□ 0.69
LCE6AA0A183 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCE6AA0A183 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LCE6AA0A183 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.38■□□□□ 0.69
LCE6AA0A183 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LCE6AA0A183 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCE6AA0A183 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LCE6AA0A183 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.37■□□□□ 0.69
LCE6AA0A183 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.36■□□□□ 0.69
LCE6AA0A183 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LCE6AA0A183 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LCE6AA0A183 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.36■□□□□ 0.69
LCE6AA0A183 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCE6AA0A183 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LCE6AA0A183 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.34■□□□□ 0.69
LCE6AA0A183 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.34■□□□□ 0.69
LCE6AA0A183 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.33■□□□□ 0.68
LCE6AA0A183 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCE6AA0A183 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCE6AA0A183 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.31■□□□□ 0.68
LCE6AA0A183 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCE6AA0A183 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.31■□□□□ 0.68
LCE6AA0A183 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LCE6AA0A183 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.3■□□□□ 0.68
LCE6AA0A183 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.28■□□□□ 0.68
LCE6AA0A183 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LCE6AA0A183 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.28■□□□□ 0.68
LCE6AA0A183 DUX4L29-201ENST00000425409 679 ntBASIC19.27■□□□□ 0.68
LCE6AA0A183 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.27■□□□□ 0.68
LCE6AA0A183 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCE6AA0A183 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LCE6AA0A183 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms