Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 AL391121.1-201ENST00000607967 1349 ntBASIC25.18■■□□□ 1.62
TRGV8A0A0C4DH27 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRGV8A0A0C4DH27 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRGV8A0A0C4DH27 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRGV8A0A0C4DH27 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.17■■□□□ 1.62
TRGV8A0A0C4DH27 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRGV8A0A0C4DH27 AL133380.1-201ENST00000506013 324 ntBASIC25.14■■□□□ 1.62
TRGV8A0A0C4DH27 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.13■■□□□ 1.61
TRGV8A0A0C4DH27 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.11■■□□□ 1.61
TRGV8A0A0C4DH27 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRGV8A0A0C4DH27 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.09■■□□□ 1.61
TRGV8A0A0C4DH27 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
TRGV8A0A0C4DH27 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRGV8A0A0C4DH27 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRGV8A0A0C4DH27 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TRGV8A0A0C4DH27 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.06■■□□□ 1.6
TRGV8A0A0C4DH27 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TRGV8A0A0C4DH27 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.05■■□□□ 1.6
TRGV8A0A0C4DH27 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.04■■□□□ 1.6
TRGV8A0A0C4DH27 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
TRGV8A0A0C4DH27 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.04■■□□□ 1.6
TRGV8A0A0C4DH27 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TRGV8A0A0C4DH27 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.04■■□□□ 1.6
TRGV8A0A0C4DH27 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.03■■□□□ 1.6
TRGV8A0A0C4DH27 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
TRGV8A0A0C4DH27 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRGV8A0A0C4DH27 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TRGV8A0A0C4DH27 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25■■□□□ 1.59
TRGV8A0A0C4DH27 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TRGV8A0A0C4DH27 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRGV8A0A0C4DH27 MIR3665-201ENST00000578708 105 ntBASIC24.97■■□□□ 1.59
TRGV8A0A0C4DH27 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRGV8A0A0C4DH27 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.95■■□□□ 1.59
TRGV8A0A0C4DH27 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TRGV8A0A0C4DH27 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
TRGV8A0A0C4DH27 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.94■■□□□ 1.58
TRGV8A0A0C4DH27 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.92■■□□□ 1.58
TRGV8A0A0C4DH27 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.92■■□□□ 1.58
TRGV8A0A0C4DH27 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRGV8A0A0C4DH27 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TRGV8A0A0C4DH27 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.86■■□□□ 1.57
TRGV8A0A0C4DH27 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
TRGV8A0A0C4DH27 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRGV8A0A0C4DH27 ABHD17AP4-201ENST00000411545 909 ntBASIC24.85■■□□□ 1.57
TRGV8A0A0C4DH27 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.85■■□□□ 1.57
TRGV8A0A0C4DH27 MIR7108-201ENST00000614319 87 ntBASIC24.85■■□□□ 1.57
TRGV8A0A0C4DH27 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRGV8A0A0C4DH27 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRGV8A0A0C4DH27 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRGV8A0A0C4DH27 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRGV8A0A0C4DH27 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
TRGV8A0A0C4DH27 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.82■■□□□ 1.56
TRGV8A0A0C4DH27 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.81■■□□□ 1.56
TRGV8A0A0C4DH27 AC087741.3-201ENST00000624270 1347 ntBASIC24.81■■□□□ 1.56
TRGV8A0A0C4DH27 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
TRGV8A0A0C4DH27 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRGV8A0A0C4DH27 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.8■■□□□ 1.56
TRGV8A0A0C4DH27 DUX4L28-201ENST00000623687 678 ntBASIC24.8■■□□□ 1.56
TRGV8A0A0C4DH27 MIR762-201ENST00000390236 83 ntBASIC24.79■■□□□ 1.56
TRGV8A0A0C4DH27 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRGV8A0A0C4DH27 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.78■■□□□ 1.56
TRGV8A0A0C4DH27 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRGV8A0A0C4DH27 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRGV8A0A0C4DH27 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 AC005559.1-201ENST00000589661 871 ntBASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 AC044849.2-201ENST00000606596 710 ntBASIC24.76■■□□□ 1.55
TRGV8A0A0C4DH27 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRGV8A0A0C4DH27 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRGV8A0A0C4DH27 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRGV8A0A0C4DH27 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
TRGV8A0A0C4DH27 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.72■■□□□ 1.55
TRGV8A0A0C4DH27 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TRGV8A0A0C4DH27 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRGV8A0A0C4DH27 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.71■■□□□ 1.55
TRGV8A0A0C4DH27 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRGV8A0A0C4DH27 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.68■■□□□ 1.54
TRGV8A0A0C4DH27 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.68■■□□□ 1.54
TRGV8A0A0C4DH27 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRGV8A0A0C4DH27 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRGV8A0A0C4DH27 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRGV8A0A0C4DH27 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TRGV8A0A0C4DH27 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TRGV8A0A0C4DH27 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.64■■□□□ 1.53
TRGV8A0A0C4DH27 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.62■■□□□ 1.53
TRGV8A0A0C4DH27 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TRGV8A0A0C4DH27 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
TRGV8A0A0C4DH27 HLA-V-202ENST00000446817 847 ntBASIC24.61■■□□□ 1.53
TRGV8A0A0C4DH27 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.61■■□□□ 1.53
TRGV8A0A0C4DH27 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
TRGV8A0A0C4DH27 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
TRGV8A0A0C4DH27 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
TRGV8A0A0C4DH27 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.58■■□□□ 1.53
TRGV8A0A0C4DH27 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TRGV8A0A0C4DH27 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.57■■□□□ 1.52
TRGV8A0A0C4DH27 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.57■■□□□ 1.52
TRGV8A0A0C4DH27 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms