Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.56■■■■□ 3.12
AFAP1Q8N556 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
AFAP1Q8N556 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
AFAP1Q8N556 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.55■■■■□ 3.12
AFAP1Q8N556 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
AFAP1Q8N556 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.55■■■■□ 3.12
AFAP1Q8N556 MIR6084-201ENST00000622012 110 ntBASIC34.55■■■■□ 3.12
AFAP1Q8N556 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
AFAP1Q8N556 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
AFAP1Q8N556 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
AFAP1Q8N556 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC34.55■■■■□ 3.12
AFAP1Q8N556 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
AFAP1Q8N556 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC34.54■■■■□ 3.12
AFAP1Q8N556 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC34.54■■■■□ 3.12
AFAP1Q8N556 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
AFAP1Q8N556 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.53■■■■□ 3.12
AFAP1Q8N556 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC34.53■■■■□ 3.12
AFAP1Q8N556 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
AFAP1Q8N556 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.53■■■■□ 3.12
AFAP1Q8N556 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
AFAP1Q8N556 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC34.53■■■■□ 3.12
AFAP1Q8N556 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
AFAP1Q8N556 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
AFAP1Q8N556 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
AFAP1Q8N556 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC34.53■■■■□ 3.12
AFAP1Q8N556 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC34.52■■■■□ 3.12
AFAP1Q8N556 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC34.52■■■■□ 3.12
AFAP1Q8N556 AL358852.1-201ENST00000623174 1268 ntBASIC34.52■■■■□ 3.12
AFAP1Q8N556 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
AFAP1Q8N556 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
AFAP1Q8N556 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.12
AFAP1Q8N556 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34.51■■■■□ 3.12
AFAP1Q8N556 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC34.51■■■■□ 3.12
AFAP1Q8N556 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC34.51■■■■□ 3.12
AFAP1Q8N556 MIR6089-201ENST00000616698 64 ntBASIC34.51■■■■□ 3.12
AFAP1Q8N556 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
AFAP1Q8N556 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.51■■■■□ 3.11
AFAP1Q8N556 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
AFAP1Q8N556 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC34.5■■■■□ 3.11
AFAP1Q8N556 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC34.5■■■■□ 3.11
AFAP1Q8N556 CCDC92B-201ENST00000575506 885 ntBASIC34.5■■■■□ 3.11
AFAP1Q8N556 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
AFAP1Q8N556 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
AFAP1Q8N556 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
AFAP1Q8N556 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC34.49■■■■□ 3.11
AFAP1Q8N556 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.49■■■■□ 3.11
AFAP1Q8N556 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.49■■■■□ 3.11
AFAP1Q8N556 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC34.49■■■■□ 3.11
AFAP1Q8N556 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC34.48■■■■□ 3.11
AFAP1Q8N556 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.48■■■■□ 3.11
AFAP1Q8N556 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
AFAP1Q8N556 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC34.48■■■■□ 3.11
AFAP1Q8N556 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC34.47■■■■□ 3.11
AFAP1Q8N556 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
AFAP1Q8N556 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
AFAP1Q8N556 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
AFAP1Q8N556 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC34.45■■■■□ 3.11
AFAP1Q8N556 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 USF2-207ENST00000595068 1612 ntTSL 5 BASIC34.45■■■■□ 3.11
AFAP1Q8N556 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.45■■■■□ 3.11
AFAP1Q8N556 MIR572-201ENST00000384983 95 ntBASIC34.45■■■■□ 3.11
AFAP1Q8N556 AICDA-202ENST00000537228 667 ntTSL 5 BASIC34.45■■■■□ 3.11
AFAP1Q8N556 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
AFAP1Q8N556 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.45■■■■□ 3.11
AFAP1Q8N556 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
AFAP1Q8N556 AC092803.2-201ENST00000564287 1899 ntBASIC34.44■■■■□ 3.1
AFAP1Q8N556 IGHV3-19-201ENST00000521488 291 ntBASIC34.44■■■■□ 3.1
AFAP1Q8N556 AC012414.1-201ENST00000556676 535 ntBASIC34.44■■■■□ 3.1
AFAP1Q8N556 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
AFAP1Q8N556 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
AFAP1Q8N556 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
AFAP1Q8N556 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.44■■■■□ 3.1
AFAP1Q8N556 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
AFAP1Q8N556 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
AFAP1Q8N556 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC34.43■■■■□ 3.1
AFAP1Q8N556 NTF6G-201ENST00000591094 616 ntBASIC34.43■■■■□ 3.1
AFAP1Q8N556 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
AFAP1Q8N556 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC34.42■■■■□ 3.1
AFAP1Q8N556 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
AFAP1Q8N556 ME3-201ENST00000323418 1068 ntTSL 5 BASIC34.42■■■■□ 3.1
AFAP1Q8N556 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.42■■■■□ 3.1
AFAP1Q8N556 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
AFAP1Q8N556 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.42■■■■□ 3.1
AFAP1Q8N556 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.42■■■■□ 3.1
AFAP1Q8N556 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
AFAP1Q8N556 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC34.41■■■■□ 3.1
AFAP1Q8N556 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC34.41■■■■□ 3.1
AFAP1Q8N556 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC34.41■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms