RNA–Protein interactions for RNA: ENST00000632856.1

TRIM2-212, Transcript of tripartite motif containing 2, humanhuman

TSL 3 BASIC

Gene TRIM2, Length 656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-212ENST00000632856 NISCHQ9Y2I1 1504 aa52.98■■■■■ 6.07
TRIM2-212ENST00000632856 CCDC180Q9P1Z9 1646 aa47.5■■■■■ 5.19
TRIM2-212ENST00000632856 ABCC9O60706 1549 aa47.4■■■■■ 5.18
TRIM2-212ENST00000632856 RB1CC1Q8TDY2 1594 aa45.17■■■■■ 4.82
TRIM2-212ENST00000632856 NACADO15069 1562 aa44.9■■■■■ 4.78
TRIM2-212ENST00000632856 DCAF8L2P0C7V8 631 aa44.57■■■■■ 4.73
TRIM2-212ENST00000632856 DNAJC5BQ9UF47 199 aa44.39■■■■■ 4.7
TRIM2-212ENST00000632856 MYO15BQ96JP2 1530 aa44.36■■■■■ 4.69
TRIM2-212ENST00000632856 PABPN1Q86U42 306 aaKnown RBP eCLIP44.12■■■■■ 4.65
TRIM2-212ENST00000632856 UNC13AQ9UPW8 1703 aa44.07■■■■■ 4.65
TRIM2-212ENST00000632856 ZCCHC6Q5VYS8 1495 aaKnown RBP43.96■■■■■ 4.63
TRIM2-212ENST00000632856 BICRAQ9NZM4 1560 aa43.87■■■■■ 4.61
TRIM2-212ENST00000632856 DCAF1Q9Y4B6 1507 aa43.8■■■■■ 4.6
TRIM2-212ENST00000632856 SHROOM4Q9ULL8 1493 aa43.36■■■■■ 4.53
TRIM2-212ENST00000632856 SCRIBQ14160 1630 aa43.26■■■■■ 4.52
TRIM2-212ENST00000632856 CC2D2AQ9P2K1 1620 aa42.83■■■■■ 4.45
TRIM2-212ENST00000632856 EIF4G1Q04637 1599 aaKnown RBP42.78■■■■■ 4.44
TRIM2-212ENST00000632856 CECR2Q9BXF3 1484 aa42.72■■■■■ 4.43
TRIM2-212ENST00000632856 NCAPD3P42695 1498 aa41.47■■■■■ 4.23
TRIM2-212ENST00000632856 ATAD2BQ9ULI0 1458 aa41.34■■■■■ 4.21
TRIM2-212ENST00000632856 SMARCA4P51532 1647 aa41.29■■■■■ 4.2
TRIM2-212ENST00000632856 SMARCA2P51531 1590 aa41.23■■■■■ 4.19
TRIM2-212ENST00000632856 HMGXB3Q12766 1538 aa41.18■■■■■ 4.18
TRIM2-212ENST00000632856 BAZ1AQ9NRL2 1556 aaPredicted RBP41.12■■■■■ 4.17
TRIM2-212ENST00000632856 PEG3Q9GZU2 1588 aa40.95■■■■■ 4.15
TRIM2-212ENST00000632856 BAZ1BQ9UIG0 1483 aaKnown RBP40.94■■■■■ 4.14
TRIM2-212ENST00000632856 ERCC6Q03468 1493 aa40.93■■■■■ 4.14
TRIM2-212ENST00000632856 CUX2O14529 1486 aa40.87■■■■■ 4.13
TRIM2-212ENST00000632856 MROH2BQ7Z745 1585 aa40.82■■■■■ 4.12
TRIM2-212ENST00000632856 NESP48681 1621 aa40.75■■■■■ 4.11
TRIM2-212ENST00000632856 DNAJC5Q9H3Z4 198 aa40.72■■■■■ 4.11
TRIM2-212ENST00000632856 LAMC3Q9Y6N6 1575 aa40.5■■■■■ 4.07
TRIM2-212ENST00000632856 THOC2Q8NI27 1593 aaKnown RBP40.35■■■■■ 4.05
TRIM2-212ENST00000632856 WIZO95785 1651 aa40.28■■■■■ 4.04
TRIM2-212ENST00000632856 PDS5BQ9NTI5 1447 aa40.26■■■■■ 4.04
TRIM2-212ENST00000632856 CADPSQ9ULU8 1353 aa40.2■■■■■ 4.03
TRIM2-212ENST00000632856 KIF21AQ7Z4S6 1674 aa40.18■■■■■ 4.02
TRIM2-212ENST00000632856 RSF1Q96T23 1441 aaPredicted RBP40.01■■■■■ 4
TRIM2-212ENST00000632856 MRC2Q9UBG0 1479 aa39.93■■■■□ 3.98
TRIM2-212ENST00000632856 TOP2AP11388 1531 aaKnown RBP39.85■■■■□ 3.97
TRIM2-212ENST00000632856 WDR62O43379 1518 aa39.84■■■■□ 3.97
TRIM2-212ENST00000632856 CEP164Q9UPV0 1460 aa39.78■■■■□ 3.96
TRIM2-212ENST00000632856 CFTRP13569 1480 aa39.77■■■■□ 3.96
TRIM2-212ENST00000632856 FANCD2Q9BXW9 1451 aa39.74■■■■□ 3.95
TRIM2-212ENST00000632856 URB2Q14146 1524 aaKnown RBP39.4■■■■□ 3.9
TRIM2-212ENST00000632856 CCDC88BA6NC98 1476 aa39.37■■■■□ 3.89
TRIM2-212ENST00000632856 PRDM2Q13029 1718 aa39.29■■■■□ 3.88
TRIM2-212ENST00000632856 TOPBP1Q92547 1522 aa38.99■■■■□ 3.83
TRIM2-212ENST00000632856 IFT140Q96RY7 1462 aa38.98■■■■□ 3.83
TRIM2-212ENST00000632856 OSCARQ8IYS5 282 aa38.96■■■■□ 3.83
TRIM2-212ENST00000632856 TRIM41Q8WV44 630 aa38.92■■■■□ 3.82
TRIM2-212ENST00000632856 ABCC8Q09428 1581 aa38.91■■■■□ 3.82
TRIM2-212ENST00000632856 ZNF608Q9ULD9 1512 aaPredicted RBP38.89■■■■□ 3.82
TRIM2-212ENST00000632856 DNMBPQ6XZF7 1577 aa38.86■■■■□ 3.81
TRIM2-212ENST00000632856 EIF4G3O43432 1585 aaKnown RBP38.7■■■■□ 3.79
TRIM2-212ENST00000632856 TARBP1Q13395 1621 aaKnown RBP38.63■■■■□ 3.78
TRIM2-212ENST00000632856 POLA1P09884 1462 aaPredicted RBP38.6■■■■□ 3.77
TRIM2-212ENST00000632856 AQRO60306 1485 aaKnown RBP eCLIP38.54■■■■□ 3.76
TRIM2-212ENST00000632856 RIMBP3CA6NJZ7 1639 aa38.45■■■■□ 3.75
TRIM2-212ENST00000632856 RIMBP3BA6NNM3 1639 aa38.45■■■■□ 3.75
TRIM2-212ENST00000632856 RIMBP3Q9UFD9 1639 aa38.45■■■■□ 3.75
TRIM2-212ENST00000632856 RAD54L2Q9Y4B4 1467 aa38.43■■■■□ 3.74
TRIM2-212ENST00000632856 SOGA1O94964 1423 aa38.41■■■■□ 3.74
TRIM2-212ENST00000632856 ARHGEF11O15085 1522 aa38.38■■■■□ 3.73
TRIM2-212ENST00000632856 FGD5Q6ZNL6 1462 aa38.37■■■■□ 3.73
TRIM2-212ENST00000632856 CUX1P39880 1505 aa38.34■■■■□ 3.73
TRIM2-212ENST00000632856 CHD1O14646 1710 aa38.32■■■■□ 3.73
TRIM2-212ENST00000632856 TDRD9Q8NDG6 1382 aaKnown RBP38.31■■■■□ 3.72
TRIM2-212ENST00000632856 WDR97A6NE52 1622 aa38.27■■■■□ 3.72
TRIM2-212ENST00000632856 FBLN2P98095 1184 aa38.23■■■■□ 3.71
TRIM2-212ENST00000632856 SUPT5HO00267 1087 aaKnown RBP38.2■■■■□ 3.71
TRIM2-212ENST00000632856 SNAPC4Q5SXM2 1469 aa38.17■■■■□ 3.7
TRIM2-212ENST00000632856 MAGI1Q96QZ7 1491 aaPredicted RBP38.09■■■■□ 3.69
TRIM2-212ENST00000632856 GRIN2BQ13224 1484 aa38.09■■■■□ 3.69
TRIM2-212ENST00000632856 CYB5RLQ6IPT4 315 aa38.03■■■■□ 3.68
TRIM2-212ENST00000632856 ARAP1Q96P48 1450 aa38.02■■■■□ 3.68
TRIM2-212ENST00000632856 CHMP7Q8WUX9 453 aaPredicted RBP37.98■■■■□ 3.67
TRIM2-212ENST00000632856 CLASP1Q7Z460 1538 aa37.97■■■■□ 3.67
TRIM2-212ENST00000632856 SYNJ2O15056 1496 aa37.96■■■■□ 3.67
TRIM2-212ENST00000632856 ABCA10Q8WWZ4 1543 aa37.96■■■■□ 3.67
TRIM2-212ENST00000632856 GAPVD1Q14C86 1478 aa37.95■■■■□ 3.67
TRIM2-212ENST00000632856 SYNJ1O43426 1573 aa37.93■■■■□ 3.66
TRIM2-212ENST00000632856 PBRM1Q86U86 1689 aa37.88■■■■□ 3.66
TRIM2-212ENST00000632856 ABCA5Q8WWZ7 1642 aa37.88■■■■□ 3.65
TRIM2-212ENST00000632856 WRNQ14191 1432 aaPredicted RBP eCLIP37.81■■■■□ 3.64
TRIM2-212ENST00000632856 TOP2BQ02880 1626 aa37.75■■■■□ 3.63
TRIM2-212ENST00000632856 BIVM-ERCC5R4GMW8 1640 aa37.74■■■■□ 3.63
TRIM2-212ENST00000632856 GRIN2AQ12879 1464 aa37.6■■■■□ 3.61
TRIM2-212ENST00000632856 ADAMTS12P58397 1594 aa37.59■■■■□ 3.61
TRIM2-212ENST00000632856 TRHP20396 242 aaPredicted RBP37.56■■■■□ 3.6
TRIM2-212ENST00000632856 NUP160Q12769 1436 aa37.5■■■■□ 3.59
TRIM2-212ENST00000632856 FHAD1B1AJZ9 1412 aa37.49■■■■□ 3.59
TRIM2-212ENST00000632856 ERICH3Q5RHP9 1530 aa37.47■■■■□ 3.59
TRIM2-212ENST00000632856 CEP170Q5SW79 1584 aa37.46■■■■□ 3.59
TRIM2-212ENST00000632856 ERCC6L2Q5T890 1561 aa37.35■■■■□ 3.57
TRIM2-212ENST00000632856 SHROOM2Q13796 1616 aa37.3■■■■□ 3.56
TRIM2-212ENST00000632856 PRG4Q92954 1404 aaPredicted RBP37.09■■■■□ 3.53
TRIM2-212ENST00000632856 RUSC2Q8N2Y8 1516 aa37.07■■■■□ 3.53
TRIM2-212ENST00000632856 JPH4Q96JJ6 628 aa37.05■■■■□ 3.52
TRIM2-212ENST00000632856 KIF27Q86VH2 1401 aa37.02■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms