RNA–Protein interactions for RNA: ENST00000519655.6

AF117829.1-201, humanhuman

TSL 5 BASIC

Gene AF117829.1, Length 1,398 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF117829.1-201ENST00000519655 NISCHQ9Y2I1 1504 aa53.44■■■■■ 6.15
AF117829.1-201ENST00000519655 CCDC180Q9P1Z9 1646 aa47.51■■■■■ 5.2
AF117829.1-201ENST00000519655 ABCC9O60706 1549 aa46.19■■■■■ 4.98
AF117829.1-201ENST00000519655 ZCCHC6Q5VYS8 1495 aaKnown RBP44.58■■■■■ 4.73
AF117829.1-201ENST00000519655 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
AF117829.1-201ENST00000519655 NACADO15069 1562 aa44.54■■■■■ 4.72
AF117829.1-201ENST00000519655 DCAF8L2P0C7V8 631 aa44.53■■■■■ 4.72
AF117829.1-201ENST00000519655 MYO15BQ96JP2 1530 aa44.31■■■■■ 4.68
AF117829.1-201ENST00000519655 DCAF1Q9Y4B6 1507 aa44.21■■■■■ 4.67
AF117829.1-201ENST00000519655 UNC13AQ9UPW8 1703 aa43.69■■■■■ 4.59
AF117829.1-201ENST00000519655 SCRIBQ14160 1630 aa43.36■■■■■ 4.53
AF117829.1-201ENST00000519655 BICRAQ9NZM4 1560 aa43.2■■■■■ 4.51
AF117829.1-201ENST00000519655 PABPN1Q86U42 306 aaKnown RBP eCLIP43.15■■■■■ 4.5
AF117829.1-201ENST00000519655 SHROOM4Q9ULL8 1493 aa42.71■■■■■ 4.43
AF117829.1-201ENST00000519655 DNAJC5BQ9UF47 199 aa42.1■■■■■ 4.33
AF117829.1-201ENST00000519655 EIF4G1Q04637 1599 aaKnown RBP42.04■■■■■ 4.32
AF117829.1-201ENST00000519655 CC2D2AQ9P2K1 1620 aa41.83■■■■■ 4.29
AF117829.1-201ENST00000519655 CECR2Q9BXF3 1484 aa41.6■■■■■ 4.25
AF117829.1-201ENST00000519655 SMARCA4P51532 1647 aa41.49■■■■■ 4.23
AF117829.1-201ENST00000519655 BAZ1AQ9NRL2 1556 aaPredicted RBP41.43■■■■■ 4.22
AF117829.1-201ENST00000519655 MROH2BQ7Z745 1585 aa41.2■■■■■ 4.19
AF117829.1-201ENST00000519655 SMARCA2P51531 1590 aa41.13■■■■■ 4.17
AF117829.1-201ENST00000519655 ATAD2BQ9ULI0 1458 aa41.11■■■■■ 4.17
AF117829.1-201ENST00000519655 NCAPD3P42695 1498 aa41.04■■■■■ 4.16
AF117829.1-201ENST00000519655 PEG3Q9GZU2 1588 aa41.02■■■■■ 4.16
AF117829.1-201ENST00000519655 HMGXB3Q12766 1538 aa40.93■■■■■ 4.14
AF117829.1-201ENST00000519655 WIZO95785 1651 aa40.84■■■■■ 4.13
AF117829.1-201ENST00000519655 BAZ1BQ9UIG0 1483 aaKnown RBP40.83■■■■■ 4.13
AF117829.1-201ENST00000519655 RSF1Q96T23 1441 aaPredicted RBP40.77■■■■■ 4.12
AF117829.1-201ENST00000519655 TOP2AP11388 1531 aaKnown RBP40.38■■■■■ 4.05
AF117829.1-201ENST00000519655 NESP48681 1621 aa40.04■■■■■ 4
AF117829.1-201ENST00000519655 LAMC3Q9Y6N6 1575 aa39.99■■■■□ 3.99
AF117829.1-201ENST00000519655 SUPT5HO00267 1087 aaKnown RBP39.93■■■■□ 3.98
AF117829.1-201ENST00000519655 CADPSQ9ULU8 1353 aa39.85■■■■□ 3.97
AF117829.1-201ENST00000519655 CCDC88BA6NC98 1476 aa39.85■■■■□ 3.97
AF117829.1-201ENST00000519655 ERCC6Q03468 1493 aa39.8■■■■□ 3.96
AF117829.1-201ENST00000519655 KIF21AQ7Z4S6 1674 aa39.69■■■■□ 3.94
AF117829.1-201ENST00000519655 CFTRP13569 1480 aa39.68■■■■□ 3.94
AF117829.1-201ENST00000519655 PDS5BQ9NTI5 1447 aa39.66■■■■□ 3.94
AF117829.1-201ENST00000519655 PRDM2Q13029 1718 aa39.61■■■■□ 3.93
AF117829.1-201ENST00000519655 THOC2Q8NI27 1593 aaKnown RBP39.44■■■■□ 3.9
AF117829.1-201ENST00000519655 FANCD2Q9BXW9 1451 aa39.44■■■■□ 3.9
AF117829.1-201ENST00000519655 CEP164Q9UPV0 1460 aa39.39■■■■□ 3.9
AF117829.1-201ENST00000519655 CUX2O14529 1486 aa39.28■■■■□ 3.88
AF117829.1-201ENST00000519655 MRC2Q9UBG0 1479 aa39.28■■■■□ 3.88
AF117829.1-201ENST00000519655 WDR62O43379 1518 aa39.15■■■■□ 3.86
AF117829.1-201ENST00000519655 URB2Q14146 1524 aaKnown RBP39.04■■■■□ 3.84
AF117829.1-201ENST00000519655 DNMBPQ6XZF7 1577 aa38.85■■■■□ 3.81
AF117829.1-201ENST00000519655 TOPBP1Q92547 1522 aa38.85■■■■□ 3.81
AF117829.1-201ENST00000519655 ABCC8Q09428 1581 aa38.83■■■■□ 3.81
AF117829.1-201ENST00000519655 CUX1P39880 1505 aa38.65■■■■□ 3.78
AF117829.1-201ENST00000519655 POLA1P09884 1462 aaPredicted RBP38.53■■■■□ 3.76
AF117829.1-201ENST00000519655 IFT140Q96RY7 1462 aa38.52■■■■□ 3.76
AF117829.1-201ENST00000519655 FGD5Q6ZNL6 1462 aa38.48■■■■□ 3.75
AF117829.1-201ENST00000519655 WRNQ14191 1432 aaPredicted RBP eCLIP38.46■■■■□ 3.75
AF117829.1-201ENST00000519655 TARBP1Q13395 1621 aaKnown RBP38.44■■■■□ 3.74
AF117829.1-201ENST00000519655 BIVM-ERCC5R4GMW8 1640 aa38.43■■■■□ 3.74
AF117829.1-201ENST00000519655 SYNJ1O43426 1573 aa38.42■■■■□ 3.74
AF117829.1-201ENST00000519655 TOP2BQ02880 1626 aa38.41■■■■□ 3.74
AF117829.1-201ENST00000519655 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
AF117829.1-201ENST00000519655 SOGA1O94964 1423 aa38.34■■■■□ 3.73
AF117829.1-201ENST00000519655 ZNF608Q9ULD9 1512 aaPredicted RBP38.34■■■■□ 3.73
AF117829.1-201ENST00000519655 EIF4G3O43432 1585 aaKnown RBP38.28■■■■□ 3.72
AF117829.1-201ENST00000519655 WDR97A6NE52 1622 aa38.25■■■■□ 3.71
AF117829.1-201ENST00000519655 AQRO60306 1485 aaKnown RBP eCLIP38.15■■■■□ 3.7
AF117829.1-201ENST00000519655 ABCA10Q8WWZ4 1543 aa38.1■■■■□ 3.69
AF117829.1-201ENST00000519655 TDRD9Q8NDG6 1382 aaKnown RBP38.1■■■■□ 3.69
AF117829.1-201ENST00000519655 ABCA5Q8WWZ7 1642 aa37.99■■■■□ 3.67
AF117829.1-201ENST00000519655 PBRM1Q86U86 1689 aa37.97■■■■□ 3.67
AF117829.1-201ENST00000519655 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
AF117829.1-201ENST00000519655 GRIN2BQ13224 1484 aa37.89■■■■□ 3.66
AF117829.1-201ENST00000519655 SNAPC4Q5SXM2 1469 aa37.83■■■■□ 3.65
AF117829.1-201ENST00000519655 CHD1O14646 1710 aa37.82■■■■□ 3.64
AF117829.1-201ENST00000519655 MAGI1Q96QZ7 1491 aaPredicted RBP37.78■■■■□ 3.64
AF117829.1-201ENST00000519655 DNAJC5Q9H3Z4 198 aa37.72■■■■□ 3.63
AF117829.1-201ENST00000519655 TRIM41Q8WV44 630 aa37.68■■■■□ 3.62
AF117829.1-201ENST00000519655 ERICH3Q5RHP9 1530 aa37.66■■■■□ 3.62
AF117829.1-201ENST00000519655 FBLN2P98095 1184 aa37.64■■■■□ 3.62
AF117829.1-201ENST00000519655 OSCARQ8IYS5 282 aa37.64■■■■□ 3.62
AF117829.1-201ENST00000519655 KIF27Q86VH2 1401 aa37.63■■■■□ 3.62
AF117829.1-201ENST00000519655 SYNJ2O15056 1496 aa37.62■■■■□ 3.61
AF117829.1-201ENST00000519655 ADAMTS12P58397 1594 aa37.62■■■■□ 3.61
AF117829.1-201ENST00000519655 CHMP7Q8WUX9 453 aaPredicted RBP37.55■■■■□ 3.6
AF117829.1-201ENST00000519655 FHAD1B1AJZ9 1412 aa37.48■■■■□ 3.59
AF117829.1-201ENST00000519655 CUL7Q14999 1698 aa37.43■■■■□ 3.58
AF117829.1-201ENST00000519655 GRIN2AQ12879 1464 aa37.42■■■■□ 3.58
AF117829.1-201ENST00000519655 IGF1RP08069 1367 aa37.4■■■■□ 3.58
AF117829.1-201ENST00000519655 RUSC2Q8N2Y8 1516 aa37.38■■■■□ 3.57
AF117829.1-201ENST00000519655 CHIC1Q5VXU3 224 aa37.37■■■■□ 3.57
AF117829.1-201ENST00000519655 CLASP1Q7Z460 1538 aa37.3■■■■□ 3.56
AF117829.1-201ENST00000519655 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
AF117829.1-201ENST00000519655 CARMIL1Q5VZK9 1371 aa37.22■■■■□ 3.55
AF117829.1-201ENST00000519655 NUP160Q12769 1436 aa37.22■■■■□ 3.55
AF117829.1-201ENST00000519655 RIMBP3CA6NJZ7 1639 aa37.13■■■■□ 3.53
AF117829.1-201ENST00000519655 RIMBP3BA6NNM3 1639 aa37.13■■■■□ 3.53
AF117829.1-201ENST00000519655 RIMBP3Q9UFD9 1639 aa37.13■■■■□ 3.53
AF117829.1-201ENST00000519655 ARHGEF11O15085 1522 aa37.1■■■■□ 3.53
AF117829.1-201ENST00000519655 EEA1Q15075 1411 aa37.06■■■■□ 3.52
AF117829.1-201ENST00000519655 RAPGEF2Q9Y4G8 1499 aa37.05■■■■□ 3.52
AF117829.1-201ENST00000519655 SHROOM2Q13796 1616 aa36.97■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms