RNA–Protein interactions for RNA: ENST00000595068.5

USF2-207, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5 BASIC

Gene USF2, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-207ENST00000595068 NISCHQ9Y2I1 1504 aa53.5■■■■■ 6.15
USF2-207ENST00000595068 CCDC180Q9P1Z9 1646 aa47.14■■■■■ 5.14
USF2-207ENST00000595068 ABCC9O60706 1549 aa45.43■■■■■ 4.86
USF2-207ENST00000595068 ZCCHC6Q5VYS8 1495 aaKnown RBP44.74■■■■■ 4.75
USF2-207ENST00000595068 DCAF8L2P0C7V8 631 aa44.52■■■■■ 4.72
USF2-207ENST00000595068 DCAF1Q9Y4B6 1507 aa44.18■■■■■ 4.66
USF2-207ENST00000595068 NACADO15069 1562 aa44.08■■■■■ 4.65
USF2-207ENST00000595068 MYO15BQ96JP2 1530 aa44■■■■■ 4.63
USF2-207ENST00000595068 RB1CC1Q8TDY2 1594 aa43.96■■■■■ 4.63
USF2-207ENST00000595068 SCRIBQ14160 1630 aa43.25■■■■■ 4.51
USF2-207ENST00000595068 UNC13AQ9UPW8 1703 aa43.18■■■■■ 4.5
USF2-207ENST00000595068 SHROOM4Q9ULL8 1493 aa43.03■■■■■ 4.48
USF2-207ENST00000595068 BICRAQ9NZM4 1560 aa42.66■■■■■ 4.42
USF2-207ENST00000595068 PABPN1Q86U42 306 aaKnown RBP eCLIP42.64■■■■■ 4.428e-7■□□□□ 11.1
USF2-207ENST00000595068 CECR2Q9BXF3 1484 aa41.67■■■■■ 4.26
USF2-207ENST00000595068 EIF4G1Q04637 1599 aaKnown RBP41.46■■■■■ 4.23
USF2-207ENST00000595068 BAZ1AQ9NRL2 1556 aaPredicted RBP41.39■■■■■ 4.22
USF2-207ENST00000595068 SMARCA4P51532 1647 aa41.37■■■■■ 4.21
USF2-207ENST00000595068 MROH2BQ7Z745 1585 aa41.32■■■■■ 4.2
USF2-207ENST00000595068 CC2D2AQ9P2K1 1620 aa41.11■■■■■ 4.17
USF2-207ENST00000595068 RSF1Q96T23 1441 aaPredicted RBP41.11■■■■■ 4.17
USF2-207ENST00000595068 WIZO95785 1651 aa40.99■■■■■ 4.15
USF2-207ENST00000595068 DNAJC5BQ9UF47 199 aa40.9■■■■■ 4.14
USF2-207ENST00000595068 SUPT5HO00267 1087 aaKnown RBP40.89■■■■■ 4.14
USF2-207ENST00000595068 ATAD2BQ9ULI0 1458 aa40.88■■■■■ 4.13
USF2-207ENST00000595068 PEG3Q9GZU2 1588 aa40.85■■■■■ 4.13
USF2-207ENST00000595068 SMARCA2P51531 1590 aa40.83■■■■■ 4.13
USF2-207ENST00000595068 NCAPD3P42695 1498 aa40.65■■■■■ 4.1
USF2-207ENST00000595068 BAZ1BQ9UIG0 1483 aaKnown RBP40.61■■■■■ 4.09
USF2-207ENST00000595068 HMGXB3Q12766 1538 aa40.55■■■■■ 4.08
USF2-207ENST00000595068 TOP2AP11388 1531 aaKnown RBP40.47■■■■■ 4.07
USF2-207ENST00000595068 CCDC88BA6NC98 1476 aa40.04■■■■■ 4
USF2-207ENST00000595068 NESP48681 1621 aa39.6■■■■□ 3.93
USF2-207ENST00000595068 CADPSQ9ULU8 1353 aa39.55■■■■□ 3.92
USF2-207ENST00000595068 CFTRP13569 1480 aa39.5■■■■□ 3.91
USF2-207ENST00000595068 LAMC3Q9Y6N6 1575 aa39.48■■■■□ 3.91
USF2-207ENST00000595068 PRDM2Q13029 1718 aa39.39■■■■□ 3.9
USF2-207ENST00000595068 KIF21AQ7Z4S6 1674 aa39.19■■■■□ 3.86
USF2-207ENST00000595068 PDS5BQ9NTI5 1447 aa39.16■■■■□ 3.86
USF2-207ENST00000595068 FANCD2Q9BXW9 1451 aa39.15■■■■□ 3.86
USF2-207ENST00000595068 ERCC6Q03468 1493 aa39.04■■■■□ 3.84
USF2-207ENST00000595068 CEP164Q9UPV0 1460 aa39■■■■□ 3.83
USF2-207ENST00000595068 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
USF2-207ENST00000595068 MRC2Q9UBG0 1479 aa38.75■■■■□ 3.79
USF2-207ENST00000595068 THOC2Q8NI27 1593 aaKnown RBP38.74■■■■□ 3.79
USF2-207ENST00000595068 WRNQ14191 1432 aaPredicted RBP eCLIP38.73■■■■□ 3.79
USF2-207ENST00000595068 URB2Q14146 1524 aaKnown RBP38.73■■■■□ 3.79
USF2-207ENST00000595068 CUX1P39880 1505 aa38.7■■■■□ 3.79
USF2-207ENST00000595068 SYNJ1O43426 1573 aa38.68■■■■□ 3.78
USF2-207ENST00000595068 DNMBPQ6XZF7 1577 aa38.64■■■■□ 3.78
USF2-207ENST00000595068 TOPBP1Q92547 1522 aa38.63■■■■□ 3.77
USF2-207ENST00000595068 CHIC1Q5VXU3 224 aa38.6■■■■□ 3.77
USF2-207ENST00000595068 WDR62O43379 1518 aa38.59■■■■□ 3.77
USF2-207ENST00000595068 TOP2BQ02880 1626 aa38.57■■■■□ 3.76
USF2-207ENST00000595068 BIVM-ERCC5R4GMW8 1640 aa38.57■■■■□ 3.76
USF2-207ENST00000595068 TRIM41Q8WV44 630 aa38.48■■■■□ 3.75
USF2-207ENST00000595068 FGD5Q6ZNL6 1462 aa38.42■■■■□ 3.74
USF2-207ENST00000595068 POLA1P09884 1462 aaPredicted RBP38.37■■■■□ 3.73
USF2-207ENST00000595068 CUX2O14529 1486 aa38.26■■■■□ 3.72
USF2-207ENST00000595068 RAD54L2Q9Y4B4 1467 aa38.25■■■■□ 3.71
USF2-207ENST00000595068 SOGA1O94964 1423 aa38.2■■■■□ 3.71
USF2-207ENST00000595068 TARBP1Q13395 1621 aaKnown RBP38.16■■■■□ 3.7
USF2-207ENST00000595068 IFT140Q96RY7 1462 aa38.1■■■■□ 3.69
USF2-207ENST00000595068 WDR97A6NE52 1622 aa38.08■■■■□ 3.69
USF2-207ENST00000595068 ABCA10Q8WWZ4 1543 aa38.02■■■■□ 3.68
USF2-207ENST00000595068 ZNF608Q9ULD9 1512 aaPredicted RBP37.98■■■■□ 3.67
USF2-207ENST00000595068 TDRD9Q8NDG6 1382 aaKnown RBP37.94■■■■□ 3.66
USF2-207ENST00000595068 RUSC2Q8N2Y8 1516 aa37.92■■■■□ 3.66
USF2-207ENST00000595068 AQRO60306 1485 aaKnown RBP eCLIP37.87■■■■□ 3.651e-7■■■■□ 23
USF2-207ENST00000595068 EIF4G3O43432 1585 aaKnown RBP37.86■■■■□ 3.65
USF2-207ENST00000595068 ABCA5Q8WWZ7 1642 aa37.85■■■■□ 3.65
USF2-207ENST00000595068 KIF27Q86VH2 1401 aa37.83■■■■□ 3.65
USF2-207ENST00000595068 FAM9AQ8IZU1 332 aaPredicted RBP37.8■■■■□ 3.64
USF2-207ENST00000595068 GAPVD1Q14C86 1478 aa37.78■■■■□ 3.64
USF2-207ENST00000595068 PBRM1Q86U86 1689 aa37.75■■■■□ 3.63
USF2-207ENST00000595068 GRIN2BQ13224 1484 aa37.62■■■■□ 3.61
USF2-207ENST00000595068 EEA1Q15075 1411 aa37.61■■■■□ 3.61
USF2-207ENST00000595068 IGF1RP08069 1367 aa37.58■■■■□ 3.61
USF2-207ENST00000595068 ERICH3Q5RHP9 1530 aa37.58■■■■□ 3.61
USF2-207ENST00000595068 CSRNP3Q8WYN3 585 aa37.54■■■■□ 3.6
USF2-207ENST00000595068 SNAPC4Q5SXM2 1469 aa37.52■■■■□ 3.6
USF2-207ENST00000595068 CUL7Q14999 1698 aa37.45■■■■□ 3.59
USF2-207ENST00000595068 ADAMTS12P58397 1594 aa37.42■■■■□ 3.58
USF2-207ENST00000595068 MAGI1Q96QZ7 1491 aaPredicted RBP37.4■■■■□ 3.58
USF2-207ENST00000595068 CARMIL1Q5VZK9 1371 aa37.39■■■■□ 3.58
USF2-207ENST00000595068 EHMT2Q96KQ7 1210 aa37.36■■■■□ 3.57
USF2-207ENST00000595068 FHAD1B1AJZ9 1412 aa37.33■■■■□ 3.57
USF2-207ENST00000595068 PRXQ9BXM0 1461 aa37.32■■■■□ 3.57
USF2-207ENST00000595068 FBLN2P98095 1184 aa37.29■■■■□ 3.56
USF2-207ENST00000595068 CHD1O14646 1710 aa37.28■■■■□ 3.56
USF2-207ENST00000595068 SYNJ2O15056 1496 aa37.28■■■■□ 3.56
USF2-207ENST00000595068 KIF21BO75037 1637 aa37.26■■■■□ 3.56
USF2-207ENST00000595068 RAPGEF2Q9Y4G8 1499 aa37.26■■■■□ 3.55
USF2-207ENST00000595068 CHMP7Q8WUX9 453 aaPredicted RBP37.24■■■■□ 3.55
USF2-207ENST00000595068 GRIN2AQ12879 1464 aa37.17■■■■□ 3.54
USF2-207ENST00000595068 LOC105371045A0A1W2PR82 267 aa37.13■■■■□ 3.53
USF2-207ENST00000595068 GOLGA3Q08378 1498 aa37.11■■■■□ 3.53
USF2-207ENST00000595068 CEP170Q5SW79 1584 aa37.01■■■■□ 3.52
USF2-207ENST00000595068 UBTFP17480 764 aaKnown RBP37.01■■■■□ 3.52
USF2-207ENST00000595068 CTTNBP2Q8WZ74 1663 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms