RNA–Protein interactions for RNA: ENST00000404924.5

UBXN2A-202, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBXN2A, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-202ENST00000404924 NISCHQ9Y2I1 1504 aa53.77■■■■■ 6.2
UBXN2A-202ENST00000404924 CCDC180Q9P1Z9 1646 aa47.29■■■■■ 5.16
UBXN2A-202ENST00000404924 ABCC9O60706 1549 aa45.15■■■■■ 4.82
UBXN2A-202ENST00000404924 ZCCHC6Q5VYS8 1495 aaKnown RBP45.05■■■■■ 4.8
UBXN2A-202ENST00000404924 DCAF1Q9Y4B6 1507 aa44.49■■■■■ 4.71
UBXN2A-202ENST00000404924 DCAF8L2P0C7V8 631 aa44.46■■■■■ 4.71
UBXN2A-202ENST00000404924 MYO15BQ96JP2 1530 aa44.2■■■■■ 4.67
UBXN2A-202ENST00000404924 NACADO15069 1562 aa44.12■■■■■ 4.65
UBXN2A-202ENST00000404924 RB1CC1Q8TDY2 1594 aa43.89■■■■■ 4.62
UBXN2A-202ENST00000404924 SCRIBQ14160 1630 aa43.32■■■■■ 4.53
UBXN2A-202ENST00000404924 SHROOM4Q9ULL8 1493 aa43.31■■■■■ 4.52
UBXN2A-202ENST00000404924 UNC13AQ9UPW8 1703 aa43.13■■■■■ 4.49
UBXN2A-202ENST00000404924 BICRAQ9NZM4 1560 aa42.62■■■■■ 4.41
UBXN2A-202ENST00000404924 PABPN1Q86U42 306 aaKnown RBP eCLIP42.39■■■■■ 4.38
UBXN2A-202ENST00000404924 CECR2Q9BXF3 1484 aa41.82■■■■■ 4.28
UBXN2A-202ENST00000404924 BAZ1AQ9NRL2 1556 aaPredicted RBP41.57■■■■■ 4.25
UBXN2A-202ENST00000404924 MROH2BQ7Z745 1585 aa41.52■■■■■ 4.24
UBXN2A-202ENST00000404924 SMARCA4P51532 1647 aa41.51■■■■■ 4.24
UBXN2A-202ENST00000404924 RSF1Q96T23 1441 aaPredicted RBP41.43■■■■■ 4.22
UBXN2A-202ENST00000404924 EIF4G1Q04637 1599 aaKnown RBP41.35■■■■■ 4.21
UBXN2A-202ENST00000404924 SUPT5HO00267 1087 aaKnown RBP41.33■■■■■ 4.21
UBXN2A-202ENST00000404924 WIZO95785 1651 aa41.19■■■■■ 4.18
UBXN2A-202ENST00000404924 PEG3Q9GZU2 1588 aa41.04■■■■■ 4.16
UBXN2A-202ENST00000404924 ATAD2BQ9ULI0 1458 aa40.93■■■■■ 4.14
UBXN2A-202ENST00000404924 SMARCA2P51531 1590 aa40.91■■■■■ 4.14
UBXN2A-202ENST00000404924 CC2D2AQ9P2K1 1620 aa40.91■■■■■ 4.14
UBXN2A-202ENST00000404924 TOP2AP11388 1531 aaKnown RBP40.72■■■■■ 4.11
UBXN2A-202ENST00000404924 NCAPD3P42695 1498 aa40.69■■■■■ 4.1
UBXN2A-202ENST00000404924 BAZ1BQ9UIG0 1483 aaKnown RBP40.66■■■■■ 4.1
UBXN2A-202ENST00000404924 HMGXB3Q12766 1538 aa40.62■■■■■ 4.09
UBXN2A-202ENST00000404924 DNAJC5BQ9UF47 199 aa40.38■■■■■ 4.05
UBXN2A-202ENST00000404924 CCDC88BA6NC98 1476 aa40.26■■■■■ 4.04
UBXN2A-202ENST00000404924 CFTRP13569 1480 aa39.61■■■■□ 3.93
UBXN2A-202ENST00000404924 CADPSQ9ULU8 1353 aa39.57■■■■□ 3.92
UBXN2A-202ENST00000404924 PRDM2Q13029 1718 aa39.54■■■■□ 3.92
UBXN2A-202ENST00000404924 NESP48681 1621 aa39.46■■■■□ 3.91
UBXN2A-202ENST00000404924 LAMC3Q9Y6N6 1575 aa39.45■■■■□ 3.91
UBXN2A-202ENST00000404924 CHIC1Q5VXU3 224 aa39.27■■■■□ 3.88
UBXN2A-202ENST00000404924 ABCC8Q09428 1581 aa39.22■■■■□ 3.87
UBXN2A-202ENST00000404924 FANCD2Q9BXW9 1451 aa39.15■■■■□ 3.86
UBXN2A-202ENST00000404924 PDS5BQ9NTI5 1447 aa39.09■■■■□ 3.85
UBXN2A-202ENST00000404924 KIF21AQ7Z4S6 1674 aa39.09■■■■□ 3.85
UBXN2A-202ENST00000404924 WRNQ14191 1432 aaPredicted RBP eCLIP39■■■■□ 3.83
UBXN2A-202ENST00000404924 CEP164Q9UPV0 1460 aa38.98■■■■□ 3.83
UBXN2A-202ENST00000404924 SYNJ1O43426 1573 aa38.94■■■■□ 3.82
UBXN2A-202ENST00000404924 TRIM41Q8WV44 630 aa38.91■■■■□ 3.82
UBXN2A-202ENST00000404924 CUX1P39880 1505 aa38.87■■■■□ 3.81
UBXN2A-202ENST00000404924 BIVM-ERCC5R4GMW8 1640 aa38.85■■■■□ 3.81
UBXN2A-202ENST00000404924 TOP2BQ02880 1626 aa38.83■■■■□ 3.81
UBXN2A-202ENST00000404924 ERCC6Q03468 1493 aa38.75■■■■□ 3.79
UBXN2A-202ENST00000404924 DNMBPQ6XZF7 1577 aa38.74■■■■□ 3.79
UBXN2A-202ENST00000404924 URB2Q14146 1524 aaKnown RBP38.73■■■■□ 3.79
UBXN2A-202ENST00000404924 TOPBP1Q92547 1522 aa38.69■■■■□ 3.78
UBXN2A-202ENST00000404924 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
UBXN2A-202ENST00000404924 THOC2Q8NI27 1593 aaKnown RBP38.59■■■■□ 3.77
UBXN2A-202ENST00000404924 FGD5Q6ZNL6 1462 aa38.53■■■■□ 3.76
UBXN2A-202ENST00000404924 WDR62O43379 1518 aa38.52■■■■□ 3.76
UBXN2A-202ENST00000404924 POLA1P09884 1462 aaPredicted RBP38.43■■■■□ 3.74
UBXN2A-202ENST00000404924 SOGA1O94964 1423 aa38.31■■■■□ 3.72
UBXN2A-202ENST00000404924 RAD54L2Q9Y4B4 1467 aa38.29■■■■□ 3.72
UBXN2A-202ENST00000404924 RUSC2Q8N2Y8 1516 aa38.24■■■■□ 3.71
UBXN2A-202ENST00000404924 CUX2O14529 1486 aa38.23■■■■□ 3.71
UBXN2A-202ENST00000404924 WDR97A6NE52 1622 aa38.22■■■■□ 3.71
UBXN2A-202ENST00000404924 TARBP1Q13395 1621 aaKnown RBP38.21■■■■□ 3.71
UBXN2A-202ENST00000404924 ABCA10Q8WWZ4 1543 aa38.17■■■■□ 3.7
UBXN2A-202ENST00000404924 FAM9AQ8IZU1 332 aaPredicted RBP38.17■■■■□ 3.7
UBXN2A-202ENST00000404924 EEA1Q15075 1411 aa38.11■■■■□ 3.69
UBXN2A-202ENST00000404924 IFT140Q96RY7 1462 aa38.08■■■■□ 3.69
UBXN2A-202ENST00000404924 KIF27Q86VH2 1401 aa38.07■■■■□ 3.68
UBXN2A-202ENST00000404924 ABCA5Q8WWZ7 1642 aa37.98■■■■□ 3.67
UBXN2A-202ENST00000404924 TDRD9Q8NDG6 1382 aaKnown RBP37.94■■■■□ 3.66
UBXN2A-202ENST00000404924 CSRNP3Q8WYN3 585 aa37.93■■■■□ 3.66
UBXN2A-202ENST00000404924 ZNF608Q9ULD9 1512 aaPredicted RBP37.9■■■■□ 3.66
UBXN2A-202ENST00000404924 GAPVD1Q14C86 1478 aa37.86■■■■□ 3.65
UBXN2A-202ENST00000404924 AQRO60306 1485 aaKnown RBP eCLIP37.82■■■■□ 3.651e-6■■■■□ 26.1
UBXN2A-202ENST00000404924 EIF4G3O43432 1585 aaKnown RBP37.81■■■■□ 3.64
UBXN2A-202ENST00000404924 PBRM1Q86U86 1689 aa37.81■■■■□ 3.64
UBXN2A-202ENST00000404924 IGF1RP08069 1367 aa37.8■■■■□ 3.64
UBXN2A-202ENST00000404924 ERICH3Q5RHP9 1530 aa37.73■■■■□ 3.63
UBXN2A-202ENST00000404924 KIF21BO75037 1637 aa37.73■■■■□ 3.63
UBXN2A-202ENST00000404924 LOC105371045A0A1W2PR82 267 aa37.72■■■■□ 3.63
UBXN2A-202ENST00000404924 PRXQ9BXM0 1461 aa37.68■■■■□ 3.62
UBXN2A-202ENST00000404924 CUL7Q14999 1698 aa37.66■■■■□ 3.62
UBXN2A-202ENST00000404924 GRIN2BQ13224 1484 aa37.66■■■■□ 3.62
UBXN2A-202ENST00000404924 EHMT2Q96KQ7 1210 aa37.63■■■■□ 3.61
UBXN2A-202ENST00000404924 CARMIL1Q5VZK9 1371 aa37.59■■■■□ 3.61
UBXN2A-202ENST00000404924 RAPGEF2Q9Y4G8 1499 aa37.57■■■■□ 3.6
UBXN2A-202ENST00000404924 GOLGA3Q08378 1498 aa37.56■■■■□ 3.6
UBXN2A-202ENST00000404924 ADAMTS12P58397 1594 aa37.52■■■■□ 3.6
UBXN2A-202ENST00000404924 SNAPC4Q5SXM2 1469 aa37.49■■■■□ 3.59
UBXN2A-202ENST00000404924 FHAD1B1AJZ9 1412 aa37.43■■■■□ 3.58
UBXN2A-202ENST00000404924 MAGI1Q96QZ7 1491 aaPredicted RBP37.43■■■■□ 3.58
UBXN2A-202ENST00000404924 UBTFP17480 764 aaKnown RBP37.35■■■■□ 3.57
UBXN2A-202ENST00000404924 TNIKQ9UKE5 1360 aa37.31■■■■□ 3.56
UBXN2A-202ENST00000404924 SYNJ2O15056 1496 aa37.28■■■■□ 3.56
UBXN2A-202ENST00000404924 CTTNBP2Q8WZ74 1663 aa37.21■■■■□ 3.55
UBXN2A-202ENST00000404924 GRIN2AQ12879 1464 aa37.21■■■■□ 3.55
UBXN2A-202ENST00000404924 CHD1O14646 1710 aa37.18■■■■□ 3.54
UBXN2A-202ENST00000404924 CHMP7Q8WUX9 453 aaPredicted RBP37.15■■■■□ 3.54
UBXN2A-202ENST00000404924 FBLN2P98095 1184 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms