Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRTM1Q86UE6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRTM1Q86UE6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
LRRTM1Q86UE6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM1Q86UE6 AC090877.2-201ENST00000558441 1738 ntBASIC19.83■□□□□ 0.77
LRRTM1Q86UE6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRRTM1Q86UE6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LRRTM1Q86UE6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 AL161729.1-201ENST00000604104 1402 ntBASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
LRRTM1Q86UE6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 MIR639-201ENST00000384974 98 ntBASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRRTM1Q86UE6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 LINC00565-201ENST00000562710 2331 ntBASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRRTM1Q86UE6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
LRRTM1Q86UE6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRRTM1Q86UE6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
LRRTM1Q86UE6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRTM1Q86UE6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms