RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 NISCHQ9Y2I1 1504 aa44.72■■■■■ 4.75
LINC00565-201ENST00000562710 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
LINC00565-201ENST00000562710 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
LINC00565-201ENST00000562710 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
LINC00565-201ENST00000562710 SUPT5HO00267 1087 aaKnown RBP37.52■■■■□ 3.6
LINC00565-201ENST00000562710 DCAF8L2P0C7V8 631 aa36.87■■■■□ 3.49
LINC00565-201ENST00000562710 DCAF1Q9Y4B6 1507 aa36.75■■■■□ 3.47
LINC00565-201ENST00000562710 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
LINC00565-201ENST00000562710 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
LINC00565-201ENST00000562710 HRCP23327 699 aa35.89■■■■□ 3.34
LINC00565-201ENST00000562710 ABCC9O60706 1549 aa35.79■■■■□ 3.32
LINC00565-201ENST00000562710 PCGF6Q9BYE7 350 aa35.68■■■■□ 3.3
LINC00565-201ENST00000562710 SCRIBQ14160 1630 aa35.55■■■■□ 3.28
LINC00565-201ENST00000562710 LOC105371045A0A1W2PR82 267 aa35.52■■■■□ 3.28
LINC00565-201ENST00000562710 RSF1Q96T23 1441 aaPredicted RBP35.45■■■■□ 3.27
LINC00565-201ENST00000562710 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
LINC00565-201ENST00000562710 NACADO15069 1562 aa35.04■■■■□ 3.2
LINC00565-201ENST00000562710 TRIM26Q12899 539 aaPredicted RBP35.03■■■■□ 3.2
LINC00565-201ENST00000562710 PPARGC1BQ86YN6 1023 aaKnown RBP35.03■■■■□ 3.2
LINC00565-201ENST00000562710 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
LINC00565-201ENST00000562710 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
LINC00565-201ENST00000562710 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
LINC00565-201ENST00000562710 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
LINC00565-201ENST00000562710 WIZO95785 1651 aa34.6■■■■□ 3.13
LINC00565-201ENST00000562710 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
LINC00565-201ENST00000562710 ZEB1P37275 1124 aaPredicted RBP34.38■■■■□ 3.09
LINC00565-201ENST00000562710 EHMT2Q96KQ7 1210 aa34.28■■■■□ 3.08
LINC00565-201ENST00000562710 EIF4G1Q04637 1599 aaKnown RBP34.26■■■■□ 3.08
LINC00565-201ENST00000562710 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.05
LINC00565-201ENST00000562710 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
LINC00565-201ENST00000562710 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.02
LINC00565-201ENST00000562710 CCDC88BA6NC98 1476 aa33.91■■■■□ 3.02
LINC00565-201ENST00000562710 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
LINC00565-201ENST00000562710 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
LINC00565-201ENST00000562710 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
LINC00565-201ENST00000562710 SOGA1O94964 1423 aa33.58■■■□□ 2.97
LINC00565-201ENST00000562710 CEP162Q5TB80 1403 aa33.56■■■□□ 2.96
LINC00565-201ENST00000562710 EEA1Q15075 1411 aa33.53■■■□□ 2.96
LINC00565-201ENST00000562710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.52■■■□□ 2.96
LINC00565-201ENST00000562710 TNIKQ9UKE5 1360 aa33.52■■■□□ 2.96
LINC00565-201ENST00000562710 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
LINC00565-201ENST00000562710 CCER1Q8TC90 406 aaPredicted RBP33.47■■■□□ 2.95
LINC00565-201ENST00000562710 CSRNP3Q8WYN3 585 aa33.44■■■□□ 2.94
LINC00565-201ENST00000562710 RUSC2Q8N2Y8 1516 aa33.41■■■□□ 2.94
LINC00565-201ENST00000562710 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
LINC00565-201ENST00000562710 PABPN1Q86U42 306 aaKnown RBP eCLIP33.36■■■□□ 2.93
LINC00565-201ENST00000562710 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
LINC00565-201ENST00000562710 GOLGA3Q08378 1498 aa33.28■■■□□ 2.92
LINC00565-201ENST00000562710 TTBK1Q5TCY1 1321 aaPredicted RBP33.25■■■□□ 2.91
LINC00565-201ENST00000562710 SCAF1Q9H7N4 1312 aaKnown RBP33.16■■■□□ 2.9
LINC00565-201ENST00000562710 SYNJ1O43426 1573 aa33.14■■■□□ 2.89
LINC00565-201ENST00000562710 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
LINC00565-201ENST00000562710 CEP164Q9UPV0 1460 aa33.08■■■□□ 2.89
LINC00565-201ENST00000562710 KIF21BO75037 1637 aa33.07■■■□□ 2.88
LINC00565-201ENST00000562710 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
LINC00565-201ENST00000562710 DIEXFQ68CQ4 756 aaKnown RBP32.94■■■□□ 2.86
LINC00565-201ENST00000562710 CLIP1P30622 1438 aa32.89■■■□□ 2.86
LINC00565-201ENST00000562710 ACIN1Q9UKV3 1341 aaKnown RBP32.82■■■□□ 2.84
LINC00565-201ENST00000562710 VPS8Q8N3P4 1428 aa32.8■■■□□ 2.84
LINC00565-201ENST00000562710 PELP1Q8IZL8 1130 aaKnown RBP32.78■■■□□ 2.84
LINC00565-201ENST00000562710 RAPGEF2Q9Y4G8 1499 aa32.77■■■□□ 2.84
LINC00565-201ENST00000562710 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
LINC00565-201ENST00000562710 NEUROD1Q13562 356 aa32.73■■■□□ 2.83
LINC00565-201ENST00000562710 ZNF316A6NFI3 1004 aaPredicted RBP32.67■■■□□ 2.82
LINC00565-201ENST00000562710 HNRNPUL2Q1KMD3 747 aaKnown RBP32.65■■■□□ 2.82
LINC00565-201ENST00000562710 BIVM-ERCC5R4GMW8 1640 aa32.64■■■□□ 2.82
LINC00565-201ENST00000562710 CENPBP07199 599 aaPredicted RBP32.61■■■□□ 2.81
LINC00565-201ENST00000562710 APLP2Q06481 763 aa32.61■■■□□ 2.81
LINC00565-201ENST00000562710 ERICH3Q5RHP9 1530 aa32.5■■■□□ 2.79
LINC00565-201ENST00000562710 RANGAP1P46060 587 aaPredicted RBP32.48■■■□□ 2.79
LINC00565-201ENST00000562710 PRXQ9BXM0 1461 aa32.47■■■□□ 2.79
LINC00565-201ENST00000562710 HMGXB3Q12766 1538 aa32.45■■■□□ 2.78
LINC00565-201ENST00000562710 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
LINC00565-201ENST00000562710 GTF3C3Q9Y5Q9 886 aa32.41■■■□□ 2.78
LINC00565-201ENST00000562710 CUX1P39880 1505 aa32.35■■■□□ 2.77
LINC00565-201ENST00000562710 ARAP1Q96P48 1450 aa32.34■■■□□ 2.77
LINC00565-201ENST00000562710 KIF27Q86VH2 1401 aa32.26■■■□□ 2.75
LINC00565-201ENST00000562710 CFTRP13569 1480 aa32.22■■■□□ 2.75
LINC00565-201ENST00000562710 MIER1Q8N108 512 aa32.2■■■□□ 2.74
LINC00565-201ENST00000562710 CLSPNQ9HAW4 1339 aa32.18■■■□□ 2.74
LINC00565-201ENST00000562710 KANK4Q5T7N3 995 aaPredicted RBP32.16■■■□□ 2.74
LINC00565-201ENST00000562710 DHX57Q6P158 1386 aaKnown RBP32.11■■■□□ 2.73
LINC00565-201ENST00000562710 YTHDC1Q96MU7 727 aaKnown RBP32.1■■■□□ 2.73
LINC00565-201ENST00000562710 RRBP1Q9P2E9 1410 aaKnown RBP32.07■■■□□ 2.73
LINC00565-201ENST00000562710 PRDM2Q13029 1718 aa32.04■■■□□ 2.72
LINC00565-201ENST00000562710 ARHGAP35Q9NRY4 1499 aa32.03■■■□□ 2.72
LINC00565-201ENST00000562710 CUX2O14529 1486 aa31.94■■■□□ 2.7
LINC00565-201ENST00000562710 CCNB3Q8WWL7 1395 aa31.9■■■□□ 2.7
LINC00565-201ENST00000562710 IGF1RP08069 1367 aa31.87■■■□□ 2.69
LINC00565-201ENST00000562710 CADPSQ9ULU8 1353 aa31.79■■■□□ 2.68
LINC00565-201ENST00000562710 MAP3K1Q13233 1512 aa31.77■■■□□ 2.68
LINC00565-201ENST00000562710 TIAM1Q13009 1591 aa31.75■■■□□ 2.67
LINC00565-201ENST00000562710 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
LINC00565-201ENST00000562710 FGD5Q6ZNL6 1462 aa31.73■■■□□ 2.67
LINC00565-201ENST00000562710 ITGAEP38570 1179 aa31.67■■■□□ 2.66
LINC00565-201ENST00000562710 RAB3GAP2Q9H2M9 1393 aa31.63■■■□□ 2.65
LINC00565-201ENST00000562710 LRRC9Q6ZRR7 1453 aa31.61■■■□□ 2.65
LINC00565-201ENST00000562710 MAPKBP1O60336 1514 aa31.56■■■□□ 2.64
LINC00565-201ENST00000562710 FHAD1B1AJZ9 1412 aa31.55■■■□□ 2.64
LINC00565-201ENST00000562710 PHLDB1Q86UU1 1377 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms