RNA–Protein interactions for RNA: ENST00000372836.4

CNPY3-201, Transcript of canopy FGF signaling regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNPY3, Length 1,704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPY3-201ENST00000372836 NISCHQ9Y2I1 1504 aa50.18■■■■■ 5.62
CNPY3-201ENST00000372836 CCDC180Q9P1Z9 1646 aa43.62■■■■■ 4.57
CNPY3-201ENST00000372836 ZCCHC6Q5VYS8 1495 aaKnown RBP42.19■■■■■ 4.34
CNPY3-201ENST00000372836 DCAF1Q9Y4B6 1507 aa41.57■■■■■ 4.25
CNPY3-201ENST00000372836 DCAF8L2P0C7V8 631 aa41.35■■■■■ 4.21
CNPY3-201ENST00000372836 MYO15BQ96JP2 1530 aa41.02■■■■■ 4.16
CNPY3-201ENST00000372836 SHROOM4Q9ULL8 1493 aa40.99■■■■■ 4.15
CNPY3-201ENST00000372836 ABCC9O60706 1549 aa40.97■■■■■ 4.15
CNPY3-201ENST00000372836 NACADO15069 1562 aa40.63■■■■■ 4.1
CNPY3-201ENST00000372836 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
CNPY3-201ENST00000372836 SCRIBQ14160 1630 aa40.06■■■■■ 4
CNPY3-201ENST00000372836 SUPT5HO00267 1087 aaKnown RBP39.63■■■■□ 3.94
CNPY3-201ENST00000372836 UNC13AQ9UPW8 1703 aa39.24■■■■□ 3.87
CNPY3-201ENST00000372836 RSF1Q96T23 1441 aaPredicted RBP39.02■■■■□ 3.84
CNPY3-201ENST00000372836 CECR2Q9BXF3 1484 aa38.91■■■■□ 3.82
CNPY3-201ENST00000372836 BICRAQ9NZM4 1560 aa38.9■■■■□ 3.82
CNPY3-201ENST00000372836 BAZ1AQ9NRL2 1556 aaPredicted RBP38.74■■■■□ 3.79
CNPY3-201ENST00000372836 MROH2BQ7Z745 1585 aa38.72■■■■□ 3.79
CNPY3-201ENST00000372836 PABPN1Q86U42 306 aaKnown RBP eCLIP38.72■■■■□ 3.79
CNPY3-201ENST00000372836 SMARCA4P51532 1647 aa38.47■■■■□ 3.75
CNPY3-201ENST00000372836 WIZO95785 1651 aa38.38■■■■□ 3.73
CNPY3-201ENST00000372836 CHIC1Q5VXU3 224 aa38.12■■■■□ 3.69
CNPY3-201ENST00000372836 PEG3Q9GZU2 1588 aa38.07■■■■□ 3.68
CNPY3-201ENST00000372836 TOP2AP11388 1531 aaKnown RBP38.06■■■■□ 3.68
CNPY3-201ENST00000372836 SMARCA2P51531 1590 aa37.85■■■■□ 3.65
CNPY3-201ENST00000372836 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
CNPY3-201ENST00000372836 EIF4G1Q04637 1599 aaKnown RBP37.74■■■■□ 3.63
CNPY3-201ENST00000372836 CCDC88BA6NC98 1476 aa37.68■■■■□ 3.62
CNPY3-201ENST00000372836 BAZ1BQ9UIG0 1483 aaKnown RBP37.63■■■■□ 3.61
CNPY3-201ENST00000372836 NCAPD3P42695 1498 aa37.52■■■■□ 3.6
CNPY3-201ENST00000372836 HMGXB3Q12766 1538 aa37.45■■■■□ 3.59
CNPY3-201ENST00000372836 TRIM41Q8WV44 630 aa37.33■■■■□ 3.57
CNPY3-201ENST00000372836 DNAJC5BQ9UF47 199 aa37.1■■■■□ 3.53
CNPY3-201ENST00000372836 CC2D2AQ9P2K1 1620 aa37.1■■■■□ 3.53
CNPY3-201ENST00000372836 ABCC8Q09428 1581 aa36.88■■■■□ 3.49
CNPY3-201ENST00000372836 CFTRP13569 1480 aa36.74■■■■□ 3.47
CNPY3-201ENST00000372836 WRNQ14191 1432 aaPredicted RBP eCLIP36.74■■■■□ 3.47
CNPY3-201ENST00000372836 LOC105371045A0A1W2PR82 267 aa36.61■■■■□ 3.45
CNPY3-201ENST00000372836 CADPSQ9ULU8 1353 aa36.57■■■■□ 3.45
CNPY3-201ENST00000372836 FAM9AQ8IZU1 332 aaPredicted RBP36.53■■■■□ 3.44
CNPY3-201ENST00000372836 SYNJ1O43426 1573 aa36.48■■■■□ 3.43
CNPY3-201ENST00000372836 PRDM2Q13029 1718 aa36.44■■■■□ 3.42
CNPY3-201ENST00000372836 EEA1Q15075 1411 aa36.43■■■■□ 3.42
CNPY3-201ENST00000372836 TOP2BQ02880 1626 aa36.38■■■■□ 3.41
CNPY3-201ENST00000372836 BIVM-ERCC5R4GMW8 1640 aa36.31■■■■□ 3.4
CNPY3-201ENST00000372836 SOGA1O94964 1423 aa36.3■■■■□ 3.4
CNPY3-201ENST00000372836 CUX1P39880 1505 aa36.19■■■■□ 3.38
CNPY3-201ENST00000372836 CSRNP3Q8WYN3 585 aa36.17■■■■□ 3.38
CNPY3-201ENST00000372836 LAMC3Q9Y6N6 1575 aa36.16■■■■□ 3.38
CNPY3-201ENST00000372836 FANCD2Q9BXW9 1451 aa36.12■■■■□ 3.37
CNPY3-201ENST00000372836 RUSC2Q8N2Y8 1516 aa36.1■■■■□ 3.37
CNPY3-201ENST00000372836 NESP48681 1621 aa36.03■■■■□ 3.36
CNPY3-201ENST00000372836 PDS5BQ9NTI5 1447 aa35.93■■■■□ 3.34
CNPY3-201ENST00000372836 EHMT2Q96KQ7 1210 aa35.92■■■■□ 3.34
CNPY3-201ENST00000372836 CEP164Q9UPV0 1460 aa35.87■■■■□ 3.33
CNPY3-201ENST00000372836 GOLGA3Q08378 1498 aa35.84■■■■□ 3.33
CNPY3-201ENST00000372836 TNIKQ9UKE5 1360 aa35.83■■■■□ 3.33
CNPY3-201ENST00000372836 KIF21BO75037 1637 aa35.83■■■■□ 3.33
CNPY3-201ENST00000372836 KIF27Q86VH2 1401 aa35.82■■■■□ 3.33
CNPY3-201ENST00000372836 DNMBPQ6XZF7 1577 aa35.82■■■■□ 3.33
CNPY3-201ENST00000372836 FGD5Q6ZNL6 1462 aa35.77■■■■□ 3.32
CNPY3-201ENST00000372836 TOPBP1Q92547 1522 aa35.74■■■■□ 3.31
CNPY3-201ENST00000372836 UBTFP17480 764 aaKnown RBP35.7■■■■□ 3.31
CNPY3-201ENST00000372836 PRXQ9BXM0 1461 aa35.62■■■■□ 3.29
CNPY3-201ENST00000372836 URB2Q14146 1524 aaKnown RBP35.61■■■■□ 3.29
CNPY3-201ENST00000372836 CUX2O14529 1486 aa35.61■■■■□ 3.29
CNPY3-201ENST00000372836 ERICH3Q5RHP9 1530 aa35.58■■■■□ 3.29
CNPY3-201ENST00000372836 POLA1P09884 1462 aaPredicted RBP35.58■■■■□ 3.29
CNPY3-201ENST00000372836 CEP162Q5TB80 1403 aa35.58■■■■□ 3.29
CNPY3-201ENST00000372836 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
CNPY3-201ENST00000372836 RAPGEF2Q9Y4G8 1499 aa35.56■■■■□ 3.28
CNPY3-201ENST00000372836 ABCA10Q8WWZ4 1543 aa35.52■■■■□ 3.28
CNPY3-201ENST00000372836 IGF1RP08069 1367 aa35.48■■■■□ 3.27
CNPY3-201ENST00000372836 RAD54L2Q9Y4B4 1467 aa35.43■■■■□ 3.26
CNPY3-201ENST00000372836 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
CNPY3-201ENST00000372836 CARMIL1Q5VZK9 1371 aa35.3■■■■□ 3.24
CNPY3-201ENST00000372836 CLIP1P30622 1438 aa35.28■■■■□ 3.24
CNPY3-201ENST00000372836 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
CNPY3-201ENST00000372836 TRIM26Q12899 539 aaPredicted RBP35.26■■■■□ 3.23
CNPY3-201ENST00000372836 PCGF6Q9BYE7 350 aa35.21■■■■□ 3.23
CNPY3-201ENST00000372836 ERCC6Q03468 1493 aa35.18■■■■□ 3.22
CNPY3-201ENST00000372836 WDR62O43379 1518 aa35.18■■■■□ 3.22
CNPY3-201ENST00000372836 TARBP1Q13395 1621 aaKnown RBP35.16■■■■□ 3.22
CNPY3-201ENST00000372836 ABCA5Q8WWZ7 1642 aa35.14■■■■□ 3.22
CNPY3-201ENST00000372836 CUL7Q14999 1698 aa35.13■■■■□ 3.21
CNPY3-201ENST00000372836 GAPVD1Q14C86 1478 aa35.12■■■■□ 3.21
CNPY3-201ENST00000372836 TDRD9Q8NDG6 1382 aaKnown RBP35.1■■■■□ 3.21
CNPY3-201ENST00000372836 IFT140Q96RY7 1462 aa35.03■■■■□ 3.2
CNPY3-201ENST00000372836 VPS8Q8N3P4 1428 aa35.01■■■■□ 3.2
CNPY3-201ENST00000372836 THOC2Q8NI27 1593 aaKnown RBP34.96■■■■□ 3.19
CNPY3-201ENST00000372836 RANGAP1P46060 587 aaPredicted RBP34.92■■■■□ 3.18
CNPY3-201ENST00000372836 ARAP1Q96P48 1450 aa34.84■■■■□ 3.17
CNPY3-201ENST00000372836 AQRO60306 1485 aaKnown RBP eCLIP34.83■■■■□ 3.172e-9■■■■■ 47.9
CNPY3-201ENST00000372836 GRIN2BQ13224 1484 aa34.82■■■■□ 3.16
CNPY3-201ENST00000372836 ARHGAP35Q9NRY4 1499 aa34.82■■■■□ 3.16
CNPY3-201ENST00000372836 PBRM1Q86U86 1689 aa34.79■■■■□ 3.16
CNPY3-201ENST00000372836 PPARGC1BQ86YN6 1023 aaKnown RBP34.79■■■■□ 3.16
CNPY3-201ENST00000372836 FHAD1B1AJZ9 1412 aa34.77■■■■□ 3.16
CNPY3-201ENST00000372836 APLP2Q06481 763 aa34.75■■■■□ 3.15
CNPY3-201ENST00000372836 ZNF608Q9ULD9 1512 aaPredicted RBP34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms