RNA–Protein interactions for RNA: ENST00000373960.3

DES-201, Transcript of desmin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DES, Length 2,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DES-201ENST00000373960 NISCHQ9Y2I1 1504 aa47.07■■■■■ 5.13
DES-201ENST00000373960 CCDC180Q9P1Z9 1646 aa41.13■■■■■ 4.18
DES-201ENST00000373960 ABCC9O60706 1549 aa39.95■■■■□ 3.99
DES-201ENST00000373960 DCAF8L2P0C7V8 631 aa39.63■■■■□ 3.93
DES-201ENST00000373960 ZCCHC6Q5VYS8 1495 aaKnown RBP39.36■■■■□ 3.89
DES-201ENST00000373960 DCAF1Q9Y4B6 1507 aa38.65■■■■□ 3.78
DES-201ENST00000373960 NACADO15069 1562 aa38.52■■■■□ 3.76
DES-201ENST00000373960 SHROOM4Q9ULL8 1493 aa38.45■■■■□ 3.75
DES-201ENST00000373960 RB1CC1Q8TDY2 1594 aa38.41■■■■□ 3.74
DES-201ENST00000373960 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.73
DES-201ENST00000373960 SCRIBQ14160 1630 aa38.12■■■■□ 3.69
DES-201ENST00000373960 UNC13AQ9UPW8 1703 aa37.76■■■■□ 3.64
DES-201ENST00000373960 PABPN1Q86U42 306 aaKnown RBP eCLIP37.7■■■■□ 3.63
DES-201ENST00000373960 BICRAQ9NZM4 1560 aa37.38■■■■□ 3.57
DES-201ENST00000373960 SUPT5HO00267 1087 aaKnown RBP37.02■■■■□ 3.52
DES-201ENST00000373960 CECR2Q9BXF3 1484 aa36.84■■■■□ 3.49
DES-201ENST00000373960 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
DES-201ENST00000373960 CHIC1Q5VXU3 224 aa36.44■■■■□ 3.42
DES-201ENST00000373960 RSF1Q96T23 1441 aaPredicted RBP36.35■■■■□ 3.41
DES-201ENST00000373960 BAZ1AQ9NRL2 1556 aaPredicted RBP36.34■■■■□ 3.41
DES-201ENST00000373960 SMARCA4P51532 1647 aa36.32■■■■□ 3.41
DES-201ENST00000373960 EIF4G1Q04637 1599 aaKnown RBP36.3■■■■□ 3.4
DES-201ENST00000373960 HRCP23327 699 aa36.22■■■■□ 3.39
DES-201ENST00000373960 WIZO95785 1651 aa36.18■■■■□ 3.38
DES-201ENST00000373960 CC2D2AQ9P2K1 1620 aa35.99■■■■□ 3.35
DES-201ENST00000373960 DNAJC5BQ9UF47 199 aa35.98■■■■□ 3.35
DES-201ENST00000373960 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
DES-201ENST00000373960 SMARCA2P51531 1590 aa35.76■■■■□ 3.31
DES-201ENST00000373960 PEG3Q9GZU2 1588 aa35.73■■■■□ 3.31
DES-201ENST00000373960 BAZ1BQ9UIG0 1483 aaKnown RBP35.7■■■■□ 3.31
DES-201ENST00000373960 PCGF6Q9BYE7 350 aa35.68■■■■□ 3.3
DES-201ENST00000373960 NCAPD3P42695 1498 aa35.62■■■■□ 3.29
DES-201ENST00000373960 TOP2AP11388 1531 aaKnown RBP35.58■■■■□ 3.29
DES-201ENST00000373960 HMGXB3Q12766 1538 aa35.45■■■■□ 3.27
DES-201ENST00000373960 CCDC88BA6NC98 1476 aa35.36■■■■□ 3.25
DES-201ENST00000373960 LOC105371045A0A1W2PR82 267 aa35.26■■■■□ 3.24
DES-201ENST00000373960 PPARGC1BQ86YN6 1023 aaKnown RBP35.21■■■■□ 3.23
DES-201ENST00000373960 TRIM26Q12899 539 aaPredicted RBP35.04■■■■□ 3.2
DES-201ENST00000373960 NESP48681 1621 aa34.89■■■■□ 3.18
DES-201ENST00000373960 CADPSQ9ULU8 1353 aa34.76■■■■□ 3.16
DES-201ENST00000373960 PELP1Q8IZL8 1130 aaKnown RBP34.74■■■■□ 3.15
DES-201ENST00000373960 CFTRP13569 1480 aa34.69■■■■□ 3.14
DES-201ENST00000373960 ZEB1P37275 1124 aaPredicted RBP34.56■■■■□ 3.12
DES-201ENST00000373960 ABCC8Q09428 1581 aa34.55■■■■□ 3.12
DES-201ENST00000373960 TRIM41Q8WV44 630 aa34.53■■■■□ 3.12
DES-201ENST00000373960 LAMC3Q9Y6N6 1575 aa34.49■■■■□ 3.11
DES-201ENST00000373960 FANCD2Q9BXW9 1451 aa34.42■■■■□ 3.1
DES-201ENST00000373960 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
DES-201ENST00000373960 KIF21AQ7Z4S6 1674 aa34.33■■■■□ 3.09
DES-201ENST00000373960 PDS5BQ9NTI5 1447 aa34.32■■■■□ 3.08
DES-201ENST00000373960 ERCC6Q03468 1493 aa34.23■■■■□ 3.07
DES-201ENST00000373960 WRNQ14191 1432 aaPredicted RBP eCLIP34.22■■■■□ 3.07
DES-201ENST00000373960 CEP164Q9UPV0 1460 aa34.22■■■■□ 3.07
DES-201ENST00000373960 SYNJ1O43426 1573 aa34.16■■■■□ 3.06
DES-201ENST00000373960 FAM9AQ8IZU1 332 aaPredicted RBP34.14■■■■□ 3.06
DES-201ENST00000373960 CUX1P39880 1505 aa34.11■■■■□ 3.05
DES-201ENST00000373960 URB2Q14146 1524 aaKnown RBP34.05■■■■□ 3.04
DES-201ENST00000373960 TOPBP1Q92547 1522 aa33.95■■■■□ 3.03
DES-201ENST00000373960 TOP2BQ02880 1626 aa33.93■■■■□ 3.02
DES-201ENST00000373960 MRC2Q9UBG0 1479 aa33.92■■■■□ 3.02
DES-201ENST00000373960 SCAF1Q9H7N4 1312 aaKnown RBP33.89■■■■□ 3.02
DES-201ENST00000373960 DNMBPQ6XZF7 1577 aa33.88■■■■□ 3.01
DES-201ENST00000373960 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
DES-201ENST00000373960 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
DES-201ENST00000373960 THOC2Q8NI27 1593 aaKnown RBP33.82■■■■□ 3
DES-201ENST00000373960 RAD54L2Q9Y4B4 1467 aa33.79■■■■□ 3
DES-201ENST00000373960 POLA1P09884 1462 aaPredicted RBP33.76■■■■□ 3
DES-201ENST00000373960 SOGA1O94964 1423 aa33.75■■■□□ 2.99
DES-201ENST00000373960 EHMT2Q96KQ7 1210 aa33.73■■■□□ 2.99
DES-201ENST00000373960 WDR62O43379 1518 aa33.72■■■□□ 2.99
DES-201ENST00000373960 RUSC2Q8N2Y8 1516 aa33.72■■■□□ 2.99
DES-201ENST00000373960 CUX2O14529 1486 aa33.61■■■□□ 2.97
DES-201ENST00000373960 TDRD9Q8NDG6 1382 aaKnown RBP33.55■■■□□ 2.96
DES-201ENST00000373960 ZNF608Q9ULD9 1512 aaPredicted RBP33.46■■■□□ 2.95
DES-201ENST00000373960 TARBP1Q13395 1621 aaKnown RBP33.45■■■□□ 2.95
DES-201ENST00000373960 AQRO60306 1485 aaKnown RBP eCLIP33.43■■■□□ 2.94
DES-201ENST00000373960 MYT1Q01538 1121 aa33.43■■■□□ 2.94
DES-201ENST00000373960 ABCA10Q8WWZ4 1543 aa33.4■■■□□ 2.94
DES-201ENST00000373960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.39■■■□□ 2.94
DES-201ENST00000373960 KIF27Q86VH2 1401 aa33.37■■■□□ 2.93
DES-201ENST00000373960 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
DES-201ENST00000373960 CCER1Q8TC90 406 aaPredicted RBP33.35■■■□□ 2.93
DES-201ENST00000373960 CSRNP3Q8WYN3 585 aa33.35■■■□□ 2.93
DES-201ENST00000373960 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
DES-201ENST00000373960 ACIN1Q9UKV3 1341 aaKnown RBP33.27■■■□□ 2.92
DES-201ENST00000373960 GAPVD1Q14C86 1478 aa33.26■■■□□ 2.91
DES-201ENST00000373960 CEP162Q5TB80 1403 aa33.24■■■□□ 2.91
DES-201ENST00000373960 TNIKQ9UKE5 1360 aa33.23■■■□□ 2.91
DES-201ENST00000373960 IGF1RP08069 1367 aa33.22■■■□□ 2.91
DES-201ENST00000373960 EIF4G3O43432 1585 aaKnown RBP33.19■■■□□ 2.9
DES-201ENST00000373960 ABCA5Q8WWZ7 1642 aa33.19■■■□□ 2.9
DES-201ENST00000373960 EEA1Q15075 1411 aa33.18■■■□□ 2.9
DES-201ENST00000373960 PBRM1Q86U86 1689 aa33.07■■■□□ 2.88
DES-201ENST00000373960 CARMIL1Q5VZK9 1371 aa33.05■■■□□ 2.88
DES-201ENST00000373960 FBLN2P98095 1184 aa33.04■■■□□ 2.88
DES-201ENST00000373960 NEUROD1Q13562 356 aa33.04■■■□□ 2.88
DES-201ENST00000373960 DIEXFQ68CQ4 756 aaKnown RBP33.04■■■□□ 2.88
DES-201ENST00000373960 RAPGEF2Q9Y4G8 1499 aa33.03■■■□□ 2.88
DES-201ENST00000373960 GRIN2BQ13224 1484 aa33.03■■■□□ 2.88
DES-201ENST00000373960 UBTFP17480 764 aaKnown RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms