RNA–Protein interactions for RNA: ENST00000374878.5

ARHGEF9-204, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF9, Length 2,217 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-204ENST00000374878 NISCHQ9Y2I1 1504 aa47.96■■■■■ 5.27
ARHGEF9-204ENST00000374878 CCDC180Q9P1Z9 1646 aa41.34■■■■■ 4.21
ARHGEF9-204ENST00000374878 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
ARHGEF9-204ENST00000374878 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
ARHGEF9-204ENST00000374878 DCAF1Q9Y4B6 1507 aa39.62■■■■□ 3.93
ARHGEF9-204ENST00000374878 DCAF8L2P0C7V8 631 aa39.34■■■■□ 3.89
ARHGEF9-204ENST00000374878 MYO15BQ96JP2 1530 aa38.8■■■■□ 3.8
ARHGEF9-204ENST00000374878 SUPT5HO00267 1087 aaKnown RBP38.73■■■■□ 3.79
ARHGEF9-204ENST00000374878 ABCC9O60706 1549 aa38.38■■■■□ 3.73
ARHGEF9-204ENST00000374878 NACADO15069 1562 aa38.31■■■■□ 3.72
ARHGEF9-204ENST00000374878 SCRIBQ14160 1630 aa38.21■■■■□ 3.71
ARHGEF9-204ENST00000374878 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.64
ARHGEF9-204ENST00000374878 RSF1Q96T23 1441 aaPredicted RBP37.58■■■■□ 3.61
ARHGEF9-204ENST00000374878 CHIC1Q5VXU3 224 aa37.56■■■■□ 3.6
ARHGEF9-204ENST00000374878 CECR2Q9BXF3 1484 aa37.24■■■■□ 3.55
ARHGEF9-204ENST00000374878 MROH2BQ7Z745 1585 aa37.12■■■■□ 3.53
ARHGEF9-204ENST00000374878 UNC13AQ9UPW8 1703 aa37.11■■■■□ 3.53
ARHGEF9-204ENST00000374878 BAZ1AQ9NRL2 1556 aaPredicted RBP36.93■■■■□ 3.5
ARHGEF9-204ENST00000374878 WIZO95785 1651 aa36.87■■■■□ 3.49
ARHGEF9-204ENST00000374878 BICRAQ9NZM4 1560 aa36.69■■■■□ 3.46
ARHGEF9-204ENST00000374878 SMARCA4P51532 1647 aa36.67■■■■□ 3.46
ARHGEF9-204ENST00000374878 TOP2AP11388 1531 aaKnown RBP36.46■■■■□ 3.43
ARHGEF9-204ENST00000374878 PABPN1Q86U42 306 aaKnown RBP eCLIP36.4■■■■□ 3.42
ARHGEF9-204ENST00000374878 TRIM41Q8WV44 630 aa36.32■■■■□ 3.41
ARHGEF9-204ENST00000374878 EIF4G1Q04637 1599 aaKnown RBP36.26■■■■□ 3.4
ARHGEF9-204ENST00000374878 LOC105371045A0A1W2PR82 267 aa36.19■■■■□ 3.38
ARHGEF9-204ENST00000374878 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
ARHGEF9-204ENST00000374878 SMARCA2P51531 1590 aa36.17■■■■□ 3.38
ARHGEF9-204ENST00000374878 CCDC88BA6NC98 1476 aa36.14■■■■□ 3.38
ARHGEF9-204ENST00000374878 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
ARHGEF9-204ENST00000374878 FAM9AQ8IZU1 332 aaPredicted RBP35.72■■■■□ 3.31
ARHGEF9-204ENST00000374878 BAZ1BQ9UIG0 1483 aaKnown RBP35.68■■■■□ 3.3
ARHGEF9-204ENST00000374878 ABCC8Q09428 1581 aa35.68■■■■□ 3.3
ARHGEF9-204ENST00000374878 PCGF6Q9BYE7 350 aa35.45■■■■□ 3.27
ARHGEF9-204ENST00000374878 HMGXB3Q12766 1538 aa35.39■■■■□ 3.26
ARHGEF9-204ENST00000374878 NCAPD3P42695 1498 aa35.39■■■■□ 3.26
ARHGEF9-204ENST00000374878 WRNQ14191 1432 aaPredicted RBP eCLIP35.31■■■■□ 3.24
ARHGEF9-204ENST00000374878 EEA1Q15075 1411 aa35.25■■■■□ 3.23
ARHGEF9-204ENST00000374878 SOGA1O94964 1423 aa35.21■■■■□ 3.23
ARHGEF9-204ENST00000374878 TRIM26Q12899 539 aaPredicted RBP35.2■■■■□ 3.23
ARHGEF9-204ENST00000374878 EHMT2Q96KQ7 1210 aa35.2■■■■□ 3.23
ARHGEF9-204ENST00000374878 HRCP23327 699 aa35.16■■■■□ 3.22
ARHGEF9-204ENST00000374878 SYNJ1O43426 1573 aa35.16■■■■□ 3.22
ARHGEF9-204ENST00000374878 RUSC2Q8N2Y8 1516 aa35.04■■■■□ 3.2
ARHGEF9-204ENST00000374878 CSRNP3Q8WYN3 585 aa35.01■■■■□ 3.2
ARHGEF9-204ENST00000374878 TOP2BQ02880 1626 aa34.92■■■■□ 3.18
ARHGEF9-204ENST00000374878 TNIKQ9UKE5 1360 aa34.9■■■■□ 3.18
ARHGEF9-204ENST00000374878 BIVM-ERCC5R4GMW8 1640 aa34.87■■■■□ 3.17
ARHGEF9-204ENST00000374878 CFTRP13569 1480 aa34.86■■■■□ 3.17
ARHGEF9-204ENST00000374878 GOLGA3Q08378 1498 aa34.83■■■■□ 3.17
ARHGEF9-204ENST00000374878 CEP162Q5TB80 1403 aa34.79■■■■□ 3.16
ARHGEF9-204ENST00000374878 KIF21BO75037 1637 aa34.77■■■■□ 3.16
ARHGEF9-204ENST00000374878 CC2D2AQ9P2K1 1620 aa34.74■■■■□ 3.15
ARHGEF9-204ENST00000374878 CEP164Q9UPV0 1460 aa34.73■■■■□ 3.15
ARHGEF9-204ENST00000374878 PRDM2Q13029 1718 aa34.7■■■■□ 3.14
ARHGEF9-204ENST00000374878 CUX1P39880 1505 aa34.64■■■■□ 3.14
ARHGEF9-204ENST00000374878 UBTFP17480 764 aaKnown RBP34.63■■■■□ 3.13
ARHGEF9-204ENST00000374878 CADPSQ9ULU8 1353 aa34.55■■■■□ 3.12
ARHGEF9-204ENST00000374878 RAPGEF2Q9Y4G8 1499 aa34.44■■■■□ 3.1
ARHGEF9-204ENST00000374878 PPARGC1BQ86YN6 1023 aaKnown RBP34.4■■■■□ 3.1
ARHGEF9-204ENST00000374878 ERICH3Q5RHP9 1530 aa34.37■■■■□ 3.09
ARHGEF9-204ENST00000374878 PRXQ9BXM0 1461 aa34.35■■■■□ 3.09
ARHGEF9-204ENST00000374878 KIF27Q86VH2 1401 aa34.33■■■■□ 3.09
ARHGEF9-204ENST00000374878 CLIP1P30622 1438 aa34.31■■■■□ 3.08
ARHGEF9-204ENST00000374878 ZEB1P37275 1124 aaPredicted RBP34.23■■■■□ 3.07
ARHGEF9-204ENST00000374878 FANCD2Q9BXW9 1451 aa34.17■■■■□ 3.06
ARHGEF9-204ENST00000374878 VPS8Q8N3P4 1428 aa34.14■■■■□ 3.06
ARHGEF9-204ENST00000374878 FGD5Q6ZNL6 1462 aa34.11■■■■□ 3.05
ARHGEF9-204ENST00000374878 CUX2O14529 1486 aa34.05■■■■□ 3.04
ARHGEF9-204ENST00000374878 DNMBPQ6XZF7 1577 aa34.01■■■■□ 3.04
ARHGEF9-204ENST00000374878 LAMC3Q9Y6N6 1575 aa34.01■■■■□ 3.03
ARHGEF9-204ENST00000374878 NESP48681 1621 aa34■■■■□ 3.03
ARHGEF9-204ENST00000374878 IGF1RP08069 1367 aa33.98■■■■□ 3.03
ARHGEF9-204ENST00000374878 TTBK1Q5TCY1 1321 aaPredicted RBP33.93■■■■□ 3.02
ARHGEF9-204ENST00000374878 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
ARHGEF9-204ENST00000374878 ARAP1Q96P48 1450 aa33.89■■■■□ 3.02
ARHGEF9-204ENST00000374878 RANGAP1P46060 587 aaPredicted RBP33.83■■■■□ 3.01
ARHGEF9-204ENST00000374878 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3
ARHGEF9-204ENST00000374878 ABCA10Q8WWZ4 1543 aa33.82■■■■□ 3
ARHGEF9-204ENST00000374878 CARMIL1Q5VZK9 1371 aa33.8■■■■□ 3
ARHGEF9-204ENST00000374878 APLP2Q06481 763 aa33.78■■■■□ 3
ARHGEF9-204ENST00000374878 RAD54L2Q9Y4B4 1467 aa33.74■■■□□ 2.99
ARHGEF9-204ENST00000374878 PDS5BQ9NTI5 1447 aa33.72■■■□□ 2.99
ARHGEF9-204ENST00000374878 URB2Q14146 1524 aaKnown RBP33.72■■■□□ 2.99
ARHGEF9-204ENST00000374878 ARHGAP35Q9NRY4 1499 aa33.72■■■□□ 2.99
ARHGEF9-204ENST00000374878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.71■■■□□ 2.99
ARHGEF9-204ENST00000374878 DNAJC5BQ9UF47 199 aa33.68■■■□□ 2.98
ARHGEF9-204ENST00000374878 CCER1Q8TC90 406 aaPredicted RBP33.65■■■□□ 2.98
ARHGEF9-204ENST00000374878 WDR97A6NE52 1622 aa33.63■■■□□ 2.97
ARHGEF9-204ENST00000374878 PELP1Q8IZL8 1130 aaKnown RBP33.59■■■□□ 2.97
ARHGEF9-204ENST00000374878 CUL7Q14999 1698 aa33.58■■■□□ 2.97
ARHGEF9-204ENST00000374878 KIF21AQ7Z4S6 1674 aa33.56■■■□□ 2.96
ARHGEF9-204ENST00000374878 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
ARHGEF9-204ENST00000374878 KANK4Q5T7N3 995 aaPredicted RBP33.41■■■□□ 2.94
ARHGEF9-204ENST00000374878 MAP3K1Q13233 1512 aa33.38■■■□□ 2.93
ARHGEF9-204ENST00000374878 GAPVD1Q14C86 1478 aa33.35■■■□□ 2.93
ARHGEF9-204ENST00000374878 HNRNPUL2Q1KMD3 747 aaKnown RBP33.35■■■□□ 2.93
ARHGEF9-204ENST00000374878 CTTNBP2Q8WZ74 1663 aa33.34■■■□□ 2.93
ARHGEF9-204ENST00000374878 TARBP1Q13395 1621 aaKnown RBP33.34■■■□□ 2.93
ARHGEF9-204ENST00000374878 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 344.8 ms