Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.64■■□□□ 1.38
MT-CO1P00395 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MT-CO1P00395 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
MT-CO1P00395 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
MT-CO1P00395 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
MT-CO1P00395 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
MT-CO1P00395 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.64■■□□□ 1.37
MT-CO1P00395 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.64■■□□□ 1.37
MT-CO1P00395 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.64■■□□□ 1.37
MT-CO1P00395 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.64■■□□□ 1.37
MT-CO1P00395 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.64■■□□□ 1.37
MT-CO1P00395 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
MT-CO1P00395 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MT-CO1P00395 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MT-CO1P00395 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
MT-CO1P00395 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
MT-CO1P00395 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.63■■□□□ 1.37
MT-CO1P00395 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
MT-CO1P00395 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
MT-CO1P00395 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO1P00395 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.62■■□□□ 1.37
MT-CO1P00395 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.62■■□□□ 1.37
MT-CO1P00395 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO1P00395 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO1P00395 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO1P00395 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.62■■□□□ 1.37
MT-CO1P00395 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
MT-CO1P00395 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
MT-CO1P00395 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.61■■□□□ 1.37
MT-CO1P00395 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
MT-CO1P00395 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.61■■□□□ 1.37
MT-CO1P00395 AC131212.1-201ENST00000613771 668 ntBASIC23.61■■□□□ 1.37
MT-CO1P00395 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.61■■□□□ 1.37
MT-CO1P00395 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.61■■□□□ 1.37
MT-CO1P00395 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.61■■□□□ 1.37
MT-CO1P00395 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
MT-CO1P00395 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
MT-CO1P00395 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO1P00395 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO1P00395 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO1P00395 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
MT-CO1P00395 KRT16P3-201ENST00000439127 1283 ntBASIC23.6■■□□□ 1.37
MT-CO1P00395 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.6■■□□□ 1.37
MT-CO1P00395 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
MT-CO1P00395 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
MT-CO1P00395 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.6■■□□□ 1.37
MT-CO1P00395 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
MT-CO1P00395 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.59■■□□□ 1.37
MT-CO1P00395 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-CO1P00395 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-CO1P00395 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.59■■□□□ 1.37
MT-CO1P00395 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MT-CO1P00395 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-CO1P00395 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
MT-CO1P00395 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MT-CO1P00395 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
MT-CO1P00395 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.58■■□□□ 1.37
MT-CO1P00395 AC138932.3-201ENST00000567634 1902 ntBASIC23.58■■□□□ 1.37
MT-CO1P00395 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.36
MT-CO1P00395 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
MT-CO1P00395 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.57■■□□□ 1.36
MT-CO1P00395 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
MT-CO1P00395 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.57■■□□□ 1.36
MT-CO1P00395 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.57■■□□□ 1.36
MT-CO1P00395 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO1P00395 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO1P00395 SNX5-217ENST00000606557 1087 ntBASIC23.57■■□□□ 1.36
MT-CO1P00395 AC010997.5-201ENST00000609182 354 ntBASIC23.57■■□□□ 1.36
MT-CO1P00395 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.57■■□□□ 1.36
MT-CO1P00395 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.57■■□□□ 1.36
MT-CO1P00395 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO1P00395 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO1P00395 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
MT-CO1P00395 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-CO1P00395 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-CO1P00395 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.56■■□□□ 1.36
MT-CO1P00395 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-CO1P00395 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
MT-CO1P00395 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.56■■□□□ 1.36
MT-CO1P00395 HLA-L-211ENST00000482052 1765 ntBASIC23.55■■□□□ 1.36
MT-CO1P00395 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-CO1P00395 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
MT-CO1P00395 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.55■■□□□ 1.36
MT-CO1P00395 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MT-CO1P00395 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.55■■□□□ 1.36
MT-CO1P00395 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
MT-CO1P00395 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms