RNA–Protein interactions for RNA: ENST00000512718.7

CSNK1G3-207, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2 BASIC

Gene CSNK1G3, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-207ENST00000512718 NISCHQ9Y2I1 1504 aa53.98■■■■■ 6.23
CSNK1G3-207ENST00000512718 CCDC180Q9P1Z9 1646 aa47.48■■■■■ 5.19
CSNK1G3-207ENST00000512718 ZCCHC6Q5VYS8 1495 aaKnown RBP45.24■■■■■ 4.83
CSNK1G3-207ENST00000512718 ABCC9O60706 1549 aa45.23■■■■■ 4.83
CSNK1G3-207ENST00000512718 DCAF1Q9Y4B6 1507 aa44.69■■■■■ 4.74
CSNK1G3-207ENST00000512718 DCAF8L2P0C7V8 631 aa44.59■■■■■ 4.73
CSNK1G3-207ENST00000512718 MYO15BQ96JP2 1530 aa44.39■■■■■ 4.7
CSNK1G3-207ENST00000512718 NACADO15069 1562 aa44.29■■■■■ 4.68
CSNK1G3-207ENST00000512718 RB1CC1Q8TDY2 1594 aa44.05■■■■■ 4.64
CSNK1G3-207ENST00000512718 SHROOM4Q9ULL8 1493 aa43.46■■■■■ 4.55
CSNK1G3-207ENST00000512718 SCRIBQ14160 1630 aa43.45■■■■■ 4.55
CSNK1G3-207ENST00000512718 UNC13AQ9UPW8 1703 aa43.21■■■■■ 4.51
CSNK1G3-207ENST00000512718 BICRAQ9NZM4 1560 aa42.7■■■■■ 4.43
CSNK1G3-207ENST00000512718 PABPN1Q86U42 306 aaKnown RBP eCLIP42.45■■■■■ 4.39
CSNK1G3-207ENST00000512718 CECR2Q9BXF3 1484 aa41.92■■■■■ 4.3
CSNK1G3-207ENST00000512718 BAZ1AQ9NRL2 1556 aaPredicted RBP41.76■■■■■ 4.28
CSNK1G3-207ENST00000512718 SMARCA4P51532 1647 aa41.66■■■■■ 4.26
CSNK1G3-207ENST00000512718 MROH2BQ7Z745 1585 aa41.65■■■■■ 4.26
CSNK1G3-207ENST00000512718 RSF1Q96T23 1441 aaPredicted RBP41.58■■■■■ 4.25
CSNK1G3-207ENST00000512718 SUPT5HO00267 1087 aaKnown RBP41.5■■■■■ 4.23
CSNK1G3-207ENST00000512718 EIF4G1Q04637 1599 aaKnown RBP41.46■■■■■ 4.23
CSNK1G3-207ENST00000512718 WIZO95785 1651 aa41.32■■■■■ 4.2
CSNK1G3-207ENST00000512718 PEG3Q9GZU2 1588 aa41.19■■■■■ 4.19
CSNK1G3-207ENST00000512718 SMARCA2P51531 1590 aa41.09■■■■■ 4.17
CSNK1G3-207ENST00000512718 ATAD2BQ9ULI0 1458 aa41.05■■■■■ 4.16
CSNK1G3-207ENST00000512718 CC2D2AQ9P2K1 1620 aa41■■■■■ 4.15
CSNK1G3-207ENST00000512718 TOP2AP11388 1531 aaKnown RBP40.89■■■■■ 4.14
CSNK1G3-207ENST00000512718 NCAPD3P42695 1498 aa40.82■■■■■ 4.12
CSNK1G3-207ENST00000512718 BAZ1BQ9UIG0 1483 aaKnown RBP40.81■■■■■ 4.12
CSNK1G3-207ENST00000512718 HMGXB3Q12766 1538 aa40.78■■■■■ 4.12
CSNK1G3-207ENST00000512718 CCDC88BA6NC98 1476 aa40.4■■■■■ 4.06
CSNK1G3-207ENST00000512718 DNAJC5BQ9UF47 199 aa40.33■■■■■ 4.05
CSNK1G3-207ENST00000512718 CFTRP13569 1480 aa39.75■■■■□ 3.95
CSNK1G3-207ENST00000512718 PRDM2Q13029 1718 aa39.71■■■■□ 3.95
CSNK1G3-207ENST00000512718 CADPSQ9ULU8 1353 aa39.7■■■■□ 3.95
CSNK1G3-207ENST00000512718 LAMC3Q9Y6N6 1575 aa39.6■■■■□ 3.93
CSNK1G3-207ENST00000512718 NESP48681 1621 aa39.53■■■■□ 3.92
CSNK1G3-207ENST00000512718 CHIC1Q5VXU3 224 aa39.45■■■■□ 3.91
CSNK1G3-207ENST00000512718 ABCC8Q09428 1581 aa39.36■■■■□ 3.89
CSNK1G3-207ENST00000512718 FANCD2Q9BXW9 1451 aa39.28■■■■□ 3.88
CSNK1G3-207ENST00000512718 PDS5BQ9NTI5 1447 aa39.24■■■■□ 3.87
CSNK1G3-207ENST00000512718 KIF21AQ7Z4S6 1674 aa39.18■■■■□ 3.86
CSNK1G3-207ENST00000512718 WRNQ14191 1432 aaPredicted RBP eCLIP39.18■■■■□ 3.86
CSNK1G3-207ENST00000512718 CEP164Q9UPV0 1460 aa39.12■■■■□ 3.85
CSNK1G3-207ENST00000512718 TRIM41Q8WV44 630 aa39.12■■■■□ 3.85
CSNK1G3-207ENST00000512718 SYNJ1O43426 1573 aa39.08■■■■□ 3.85
CSNK1G3-207ENST00000512718 BIVM-ERCC5R4GMW8 1640 aa39.01■■■■□ 3.84
CSNK1G3-207ENST00000512718 TOP2BQ02880 1626 aa39.01■■■■□ 3.83
CSNK1G3-207ENST00000512718 CUX1P39880 1505 aa39■■■■□ 3.83
CSNK1G3-207ENST00000512718 DNMBPQ6XZF7 1577 aa38.88■■■■□ 3.81
CSNK1G3-207ENST00000512718 ERCC6Q03468 1493 aa38.88■■■■□ 3.81
CSNK1G3-207ENST00000512718 URB2Q14146 1524 aaKnown RBP38.82■■■■□ 3.81
CSNK1G3-207ENST00000512718 TOPBP1Q92547 1522 aa38.81■■■■□ 3.8
CSNK1G3-207ENST00000512718 MRC2Q9UBG0 1479 aa38.79■■■■□ 3.8
CSNK1G3-207ENST00000512718 THOC2Q8NI27 1593 aaKnown RBP38.68■■■■□ 3.78
CSNK1G3-207ENST00000512718 FGD5Q6ZNL6 1462 aa38.65■■■■□ 3.78
CSNK1G3-207ENST00000512718 WDR62O43379 1518 aa38.64■■■■□ 3.78
CSNK1G3-207ENST00000512718 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
CSNK1G3-207ENST00000512718 SOGA1O94964 1423 aa38.45■■■■□ 3.75
CSNK1G3-207ENST00000512718 RAD54L2Q9Y4B4 1467 aa38.39■■■■□ 3.74
CSNK1G3-207ENST00000512718 WDR97A6NE52 1622 aa38.35■■■■□ 3.73
CSNK1G3-207ENST00000512718 EEA1Q15075 1411 aa38.35■■■■□ 3.73
CSNK1G3-207ENST00000512718 RUSC2Q8N2Y8 1516 aa38.34■■■■□ 3.73
CSNK1G3-207ENST00000512718 ABCA10Q8WWZ4 1543 aa38.32■■■■□ 3.73
CSNK1G3-207ENST00000512718 FAM9AQ8IZU1 332 aaPredicted RBP38.31■■■■□ 3.72
CSNK1G3-207ENST00000512718 TARBP1Q13395 1621 aaKnown RBP38.31■■■■□ 3.72
CSNK1G3-207ENST00000512718 CUX2O14529 1486 aa38.31■■■■□ 3.72
CSNK1G3-207ENST00000512718 KIF27Q86VH2 1401 aa38.25■■■■□ 3.71
CSNK1G3-207ENST00000512718 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
CSNK1G3-207ENST00000512718 ABCA5Q8WWZ7 1642 aa38.11■■■■□ 3.69
CSNK1G3-207ENST00000512718 CSRNP3Q8WYN3 585 aa38.1■■■■□ 3.69
CSNK1G3-207ENST00000512718 TDRD9Q8NDG6 1382 aaKnown RBP38.04■■■■□ 3.68
CSNK1G3-207ENST00000512718 GAPVD1Q14C86 1478 aa38■■■■□ 3.67
CSNK1G3-207ENST00000512718 ZNF608Q9ULD9 1512 aaPredicted RBP37.98■■■■□ 3.67
CSNK1G3-207ENST00000512718 PBRM1Q86U86 1689 aa37.95■■■■□ 3.67
CSNK1G3-207ENST00000512718 EIF4G3O43432 1585 aaKnown RBP37.93■■■■□ 3.66
CSNK1G3-207ENST00000512718 KIF21BO75037 1637 aa37.93■■■■□ 3.66
CSNK1G3-207ENST00000512718 IGF1RP08069 1367 aa37.92■■■■□ 3.66
CSNK1G3-207ENST00000512718 AQRO60306 1485 aaKnown RBP eCLIP37.91■■■■□ 3.66
CSNK1G3-207ENST00000512718 ERICH3Q5RHP9 1530 aa37.89■■■■□ 3.66
CSNK1G3-207ENST00000512718 LOC105371045A0A1W2PR82 267 aa37.86■■■■□ 3.65
CSNK1G3-207ENST00000512718 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
CSNK1G3-207ENST00000512718 CUL7Q14999 1698 aa37.84■■■■□ 3.65
CSNK1G3-207ENST00000512718 GRIN2BQ13224 1484 aa37.8■■■■□ 3.64
CSNK1G3-207ENST00000512718 GOLGA3Q08378 1498 aa37.77■■■■□ 3.64
CSNK1G3-207ENST00000512718 EHMT2Q96KQ7 1210 aa37.76■■■■□ 3.63
CSNK1G3-207ENST00000512718 CARMIL1Q5VZK9 1371 aa37.74■■■■□ 3.63
CSNK1G3-207ENST00000512718 RAPGEF2Q9Y4G8 1499 aa37.72■■■■□ 3.63
CSNK1G3-207ENST00000512718 ADAMTS12P58397 1594 aa37.65■■■■□ 3.62
CSNK1G3-207ENST00000512718 SNAPC4Q5SXM2 1469 aa37.61■■■■□ 3.61
CSNK1G3-207ENST00000512718 FHAD1B1AJZ9 1412 aa37.58■■■■□ 3.61
CSNK1G3-207ENST00000512718 MAGI1Q96QZ7 1491 aaPredicted RBP37.57■■■■□ 3.6
CSNK1G3-207ENST00000512718 UBTFP17480 764 aaKnown RBP37.54■■■■□ 3.6
CSNK1G3-207ENST00000512718 TNIKQ9UKE5 1360 aa37.51■■■■□ 3.6
CSNK1G3-207ENST00000512718 SYNJ2O15056 1496 aa37.42■■■■□ 3.58
CSNK1G3-207ENST00000512718 CTTNBP2Q8WZ74 1663 aa37.37■■■■□ 3.57
CSNK1G3-207ENST00000512718 GRIN2AQ12879 1464 aa37.34■■■■□ 3.57
CSNK1G3-207ENST00000512718 CHMP7Q8WUX9 453 aaPredicted RBP37.27■■■■□ 3.56
CSNK1G3-207ENST00000512718 CHD1O14646 1710 aa37.26■■■■□ 3.56
CSNK1G3-207ENST00000512718 CEP162Q5TB80 1403 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms