RNA–Protein interactions for RNA: ENST00000305103.3

COMMD5-201, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD5, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-201ENST00000305103 NISCHQ9Y2I1 1504 aa55.19■■■■■ 6.43
COMMD5-201ENST00000305103 CCDC180Q9P1Z9 1646 aa48.88■■■■■ 5.42
COMMD5-201ENST00000305103 ABCC9O60706 1549 aa47.52■■■■■ 5.2
COMMD5-201ENST00000305103 DCAF8L2P0C7V8 631 aa46.08■■■■■ 4.97
COMMD5-201ENST00000305103 ZCCHC6Q5VYS8 1495 aaKnown RBP46.04■■■■■ 4.96
COMMD5-201ENST00000305103 NACADO15069 1562 aa45.84■■■■■ 4.93
COMMD5-201ENST00000305103 RB1CC1Q8TDY2 1594 aa45.82■■■■■ 4.93
COMMD5-201ENST00000305103 MYO15BQ96JP2 1530 aa45.64■■■■■ 4.9
COMMD5-201ENST00000305103 DCAF1Q9Y4B6 1507 aa45.62■■■■■ 4.89
COMMD5-201ENST00000305103 UNC13AQ9UPW8 1703 aa44.9■■■■■ 4.78
COMMD5-201ENST00000305103 SCRIBQ14160 1630 aa44.72■■■■■ 4.75
COMMD5-201ENST00000305103 PABPN1Q86U42 306 aaKnown RBP eCLIP44.51■■■■■ 4.72
COMMD5-201ENST00000305103 BICRAQ9NZM4 1560 aa44.46■■■■■ 4.71
COMMD5-201ENST00000305103 SHROOM4Q9ULL8 1493 aa43.96■■■■■ 4.63
COMMD5-201ENST00000305103 DNAJC5BQ9UF47 199 aa43.27■■■■■ 4.52
COMMD5-201ENST00000305103 EIF4G1Q04637 1599 aaKnown RBP43.24■■■■■ 4.51
COMMD5-201ENST00000305103 CECR2Q9BXF3 1484 aa43■■■■■ 4.47
COMMD5-201ENST00000305103 CC2D2AQ9P2K1 1620 aa42.99■■■■■ 4.47
COMMD5-201ENST00000305103 SMARCA4P51532 1647 aa42.77■■■■■ 4.44
COMMD5-201ENST00000305103 BAZ1AQ9NRL2 1556 aaPredicted RBP42.74■■■■■ 4.43
COMMD5-201ENST00000305103 MROH2BQ7Z745 1585 aa42.58■■■■■ 4.41
COMMD5-201ENST00000305103 ATAD2BQ9ULI0 1458 aa42.4■■■■■ 4.38
COMMD5-201ENST00000305103 SMARCA2P51531 1590 aa42.36■■■■■ 4.37
COMMD5-201ENST00000305103 NCAPD3P42695 1498 aa42.29■■■■■ 4.36
COMMD5-201ENST00000305103 PEG3Q9GZU2 1588 aa42.28■■■■■ 4.36
COMMD5-201ENST00000305103 RSF1Q96T23 1441 aaPredicted RBP42.21■■■■■ 4.35
COMMD5-201ENST00000305103 WIZO95785 1651 aa42.19■■■■■ 4.34
COMMD5-201ENST00000305103 HMGXB3Q12766 1538 aa42.12■■■■■ 4.33
COMMD5-201ENST00000305103 BAZ1BQ9UIG0 1483 aaKnown RBP42.1■■■■■ 4.33
COMMD5-201ENST00000305103 TOP2AP11388 1531 aaKnown RBP41.69■■■■■ 4.26
COMMD5-201ENST00000305103 SUPT5HO00267 1087 aaKnown RBP41.54■■■■■ 4.24
COMMD5-201ENST00000305103 NESP48681 1621 aa41.26■■■■■ 4.2
COMMD5-201ENST00000305103 CCDC88BA6NC98 1476 aa41.22■■■■■ 4.19
COMMD5-201ENST00000305103 LAMC3Q9Y6N6 1575 aa41.14■■■■■ 4.18
COMMD5-201ENST00000305103 CADPSQ9ULU8 1353 aa41.1■■■■■ 4.17
COMMD5-201ENST00000305103 CFTRP13569 1480 aa40.93■■■■■ 4.14
COMMD5-201ENST00000305103 ERCC6Q03468 1493 aa40.91■■■■■ 4.14
COMMD5-201ENST00000305103 PDS5BQ9NTI5 1447 aa40.84■■■■■ 4.13
COMMD5-201ENST00000305103 KIF21AQ7Z4S6 1674 aa40.8■■■■■ 4.12
COMMD5-201ENST00000305103 PRDM2Q13029 1718 aa40.73■■■■■ 4.11
COMMD5-201ENST00000305103 FANCD2Q9BXW9 1451 aa40.65■■■■■ 4.1
COMMD5-201ENST00000305103 CEP164Q9UPV0 1460 aa40.57■■■■■ 4.08
COMMD5-201ENST00000305103 THOC2Q8NI27 1593 aaKnown RBP40.5■■■■■ 4.07
COMMD5-201ENST00000305103 MRC2Q9UBG0 1479 aa40.41■■■■■ 4.06
COMMD5-201ENST00000305103 CUX2O14529 1486 aa40.26■■■■■ 4.04
COMMD5-201ENST00000305103 WDR62O43379 1518 aa40.26■■■■■ 4.04
COMMD5-201ENST00000305103 URB2Q14146 1524 aaKnown RBP40.24■■■■■ 4.03
COMMD5-201ENST00000305103 TOPBP1Q92547 1522 aa40.06■■■■■ 4
COMMD5-201ENST00000305103 DNMBPQ6XZF7 1577 aa40.04■■■■■ 4
COMMD5-201ENST00000305103 ABCC8Q09428 1581 aa40.02■■■■■ 4
COMMD5-201ENST00000305103 CUX1P39880 1505 aa39.92■■■■□ 3.98
COMMD5-201ENST00000305103 WRNQ14191 1432 aaPredicted RBP eCLIP39.79■■■■□ 3.96
COMMD5-201ENST00000305103 POLA1P09884 1462 aaPredicted RBP39.74■■■■□ 3.95
COMMD5-201ENST00000305103 SYNJ1O43426 1573 aa39.72■■■■□ 3.95
COMMD5-201ENST00000305103 FGD5Q6ZNL6 1462 aa39.72■■■■□ 3.95
COMMD5-201ENST00000305103 IFT140Q96RY7 1462 aa39.67■■■■□ 3.94
COMMD5-201ENST00000305103 TOP2BQ02880 1626 aa39.67■■■■□ 3.94
COMMD5-201ENST00000305103 BIVM-ERCC5R4GMW8 1640 aa39.67■■■■□ 3.94
COMMD5-201ENST00000305103 RAD54L2Q9Y4B4 1467 aa39.6■■■■□ 3.93
COMMD5-201ENST00000305103 TARBP1Q13395 1621 aaKnown RBP39.6■■■■□ 3.93
COMMD5-201ENST00000305103 SOGA1O94964 1423 aa39.59■■■■□ 3.93
COMMD5-201ENST00000305103 ZNF608Q9ULD9 1512 aaPredicted RBP39.52■■■■□ 3.92
COMMD5-201ENST00000305103 EIF4G3O43432 1585 aaKnown RBP39.38■■■■□ 3.89
COMMD5-201ENST00000305103 WDR97A6NE52 1622 aa39.38■■■■□ 3.89
COMMD5-201ENST00000305103 AQRO60306 1485 aaKnown RBP eCLIP39.36■■■■□ 3.89
COMMD5-201ENST00000305103 TDRD9Q8NDG6 1382 aaKnown RBP39.35■■■■□ 3.89
COMMD5-201ENST00000305103 ABCA10Q8WWZ4 1543 aa39.31■■■■□ 3.88
COMMD5-201ENST00000305103 TRIM41Q8WV44 630 aa39.17■■■■□ 3.86
COMMD5-201ENST00000305103 ABCA5Q8WWZ7 1642 aa39.15■■■■□ 3.86
COMMD5-201ENST00000305103 GAPVD1Q14C86 1478 aa39.14■■■■□ 3.86
COMMD5-201ENST00000305103 PBRM1Q86U86 1689 aa39.08■■■■□ 3.85
COMMD5-201ENST00000305103 GRIN2BQ13224 1484 aa39.06■■■■□ 3.84
COMMD5-201ENST00000305103 SNAPC4Q5SXM2 1469 aa38.99■■■■□ 3.83
COMMD5-201ENST00000305103 CHIC1Q5VXU3 224 aa38.95■■■■□ 3.83
COMMD5-201ENST00000305103 KIF27Q86VH2 1401 aa38.92■■■■□ 3.82
COMMD5-201ENST00000305103 MAGI1Q96QZ7 1491 aaPredicted RBP38.9■■■■□ 3.82
COMMD5-201ENST00000305103 CHD1O14646 1710 aa38.85■■■■□ 3.81
COMMD5-201ENST00000305103 FBLN2P98095 1184 aa38.84■■■■□ 3.81
COMMD5-201ENST00000305103 ERICH3Q5RHP9 1530 aa38.84■■■■□ 3.81
COMMD5-201ENST00000305103 RUSC2Q8N2Y8 1516 aa38.77■■■■□ 3.8
COMMD5-201ENST00000305103 SYNJ2O15056 1496 aa38.76■■■■□ 3.8
COMMD5-201ENST00000305103 CHMP7Q8WUX9 453 aaPredicted RBP38.75■■■■□ 3.79
COMMD5-201ENST00000305103 ADAMTS12P58397 1594 aa38.75■■■■□ 3.79
COMMD5-201ENST00000305103 IGF1RP08069 1367 aa38.72■■■■□ 3.79
COMMD5-201ENST00000305103 OSCARQ8IYS5 282 aa38.71■■■■□ 3.79
COMMD5-201ENST00000305103 FHAD1B1AJZ9 1412 aa38.67■■■■□ 3.78
COMMD5-201ENST00000305103 CUL7Q14999 1698 aa38.6■■■■□ 3.77
COMMD5-201ENST00000305103 DNAJC5Q9H3Z4 198 aa38.59■■■■□ 3.77
COMMD5-201ENST00000305103 GRIN2AQ12879 1464 aa38.57■■■■□ 3.76
COMMD5-201ENST00000305103 CARMIL1Q5VZK9 1371 aa38.5■■■■□ 3.75
COMMD5-201ENST00000305103 FAM9AQ8IZU1 332 aaPredicted RBP38.43■■■■□ 3.74
COMMD5-201ENST00000305103 EEA1Q15075 1411 aa38.4■■■■□ 3.74
COMMD5-201ENST00000305103 CEP170Q5SW79 1584 aa38.39■■■■□ 3.74
COMMD5-201ENST00000305103 CLASP1Q7Z460 1538 aa38.36■■■■□ 3.73
COMMD5-201ENST00000305103 CSRNP3Q8WYN3 585 aa38.35■■■■□ 3.73
COMMD5-201ENST00000305103 NUP160Q12769 1436 aa38.35■■■■□ 3.73
COMMD5-201ENST00000305103 RAPGEF2Q9Y4G8 1499 aa38.31■■■■□ 3.72
COMMD5-201ENST00000305103 PRXQ9BXM0 1461 aa38.27■■■■□ 3.72
COMMD5-201ENST00000305103 ARHGEF11O15085 1522 aa38.1■■■■□ 3.69
COMMD5-201ENST00000305103 KIAA0586Q9BVV6 1533 aa38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms