RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 NISCHQ9Y2I1 1504 aa55.76■■■■■ 6.52
SNX5-217ENST00000606557 CCDC180Q9P1Z9 1646 aa49.56■■■■■ 5.52
SNX5-217ENST00000606557 ABCC9O60706 1549 aa48.09■■■■■ 5.29
SNX5-217ENST00000606557 ZCCHC6Q5VYS8 1495 aaKnown RBP46.53■■■■■ 5.04
SNX5-217ENST00000606557 NACADO15069 1562 aa46.44■■■■■ 5.03
SNX5-217ENST00000606557 RB1CC1Q8TDY2 1594 aa46.44■■■■■ 5.03
SNX5-217ENST00000606557 DCAF8L2P0C7V8 631 aa46.29■■■■■ 5
SNX5-217ENST00000606557 MYO15BQ96JP2 1530 aa46.26■■■■■ 5
SNX5-217ENST00000606557 DCAF1Q9Y4B6 1507 aa46.18■■■■■ 4.98
SNX5-217ENST00000606557 UNC13AQ9UPW8 1703 aa45.55■■■■■ 4.88
SNX5-217ENST00000606557 SCRIBQ14160 1630 aa45.18■■■■■ 4.82
SNX5-217ENST00000606557 BICRAQ9NZM4 1560 aa45.07■■■■■ 4.8
SNX5-217ENST00000606557 PABPN1Q86U42 306 aaKnown RBP eCLIP44.91■■■■■ 4.78
SNX5-217ENST00000606557 SHROOM4Q9ULL8 1493 aa44.59■■■■■ 4.73
SNX5-217ENST00000606557 DNAJC5BQ9UF47 199 aa43.84■■■■■ 4.61
SNX5-217ENST00000606557 EIF4G1Q04637 1599 aaKnown RBP43.82■■■■■ 4.61
SNX5-217ENST00000606557 CC2D2AQ9P2K1 1620 aa43.59■■■■■ 4.57
SNX5-217ENST00000606557 CECR2Q9BXF3 1484 aa43.38■■■■■ 4.54
SNX5-217ENST00000606557 SMARCA4P51532 1647 aa43.26■■■■■ 4.52
SNX5-217ENST00000606557 BAZ1AQ9NRL2 1556 aaPredicted RBP43.21■■■■■ 4.51
SNX5-217ENST00000606557 MROH2BQ7Z745 1585 aa42.98■■■■■ 4.47
SNX5-217ENST00000606557 ATAD2BQ9ULI0 1458 aa42.88■■■■■ 4.46
SNX5-217ENST00000606557 SMARCA2P51531 1590 aa42.88■■■■■ 4.45
SNX5-217ENST00000606557 PEG3Q9GZU2 1588 aa42.84■■■■■ 4.45
SNX5-217ENST00000606557 NCAPD3P42695 1498 aa42.81■■■■■ 4.44
SNX5-217ENST00000606557 HMGXB3Q12766 1538 aa42.7■■■■■ 4.43
SNX5-217ENST00000606557 WIZO95785 1651 aa42.58■■■■■ 4.41
SNX5-217ENST00000606557 BAZ1BQ9UIG0 1483 aaKnown RBP42.55■■■■■ 4.4
SNX5-217ENST00000606557 RSF1Q96T23 1441 aaPredicted RBP42.54■■■■■ 4.4
SNX5-217ENST00000606557 TOP2AP11388 1531 aaKnown RBP42.12■■■■■ 4.33
SNX5-217ENST00000606557 NESP48681 1621 aa41.73■■■■■ 4.27
SNX5-217ENST00000606557 LAMC3Q9Y6N6 1575 aa41.7■■■■■ 4.27
SNX5-217ENST00000606557 SUPT5HO00267 1087 aaKnown RBP41.57■■■■■ 4.25
SNX5-217ENST00000606557 CCDC88BA6NC98 1476 aa41.57■■■■■ 4.25
SNX5-217ENST00000606557 CADPSQ9ULU8 1353 aa41.54■■■■■ 4.24
SNX5-217ENST00000606557 ERCC6Q03468 1493 aa41.41■■■■■ 4.22
SNX5-217ENST00000606557 CFTRP13569 1480 aa41.4■■■■■ 4.22
SNX5-217ENST00000606557 KIF21AQ7Z4S6 1674 aa41.36■■■■■ 4.21
SNX5-217ENST00000606557 PDS5BQ9NTI5 1447 aa41.32■■■■■ 4.21
SNX5-217ENST00000606557 PRDM2Q13029 1718 aa41.31■■■■■ 4.2
SNX5-217ENST00000606557 THOC2Q8NI27 1593 aaKnown RBP41.12■■■■■ 4.17
SNX5-217ENST00000606557 FANCD2Q9BXW9 1451 aa41.11■■■■■ 4.17
SNX5-217ENST00000606557 CEP164Q9UPV0 1460 aa41.04■■■■■ 4.16
SNX5-217ENST00000606557 MRC2Q9UBG0 1479 aa40.93■■■■■ 4.14
SNX5-217ENST00000606557 CUX2O14529 1486 aa40.92■■■■■ 4.14
SNX5-217ENST00000606557 WDR62O43379 1518 aa40.83■■■■■ 4.13
SNX5-217ENST00000606557 URB2Q14146 1524 aaKnown RBP40.72■■■■■ 4.11
SNX5-217ENST00000606557 DNMBPQ6XZF7 1577 aa40.51■■■■■ 4.08
SNX5-217ENST00000606557 TOPBP1Q92547 1522 aa40.51■■■■■ 4.08
SNX5-217ENST00000606557 ABCC8Q09428 1581 aa40.48■■■■■ 4.07
SNX5-217ENST00000606557 CUX1P39880 1505 aa40.32■■■■■ 4.04
SNX5-217ENST00000606557 POLA1P09884 1462 aaPredicted RBP40.18■■■■■ 4.02
SNX5-217ENST00000606557 IFT140Q96RY7 1462 aa40.15■■■■■ 4.02
SNX5-217ENST00000606557 FGD5Q6ZNL6 1462 aa40.12■■■■■ 4.01
SNX5-217ENST00000606557 WRNQ14191 1432 aaPredicted RBP eCLIP40.1■■■■■ 4.016e-6■■■□□ 16.7
SNX5-217ENST00000606557 TARBP1Q13395 1621 aaKnown RBP40.1■■■■■ 4.01
SNX5-217ENST00000606557 BIVM-ERCC5R4GMW8 1640 aa40.1■■■■■ 4.01
SNX5-217ENST00000606557 SYNJ1O43426 1573 aa40.08■■■■■ 4.01
SNX5-217ENST00000606557 TOP2BQ02880 1626 aa40.07■■■■■ 4.01
SNX5-217ENST00000606557 RAD54L2Q9Y4B4 1467 aa39.98■■■■□ 3.99
SNX5-217ENST00000606557 ZNF608Q9ULD9 1512 aaPredicted RBP39.96■■■■□ 3.99
SNX5-217ENST00000606557 SOGA1O94964 1423 aa39.95■■■■□ 3.99
SNX5-217ENST00000606557 WDR97A6NE52 1622 aa39.91■■■■□ 3.98
SNX5-217ENST00000606557 EIF4G3O43432 1585 aaKnown RBP39.9■■■■□ 3.98
SNX5-217ENST00000606557 ABCA10Q8WWZ4 1543 aa39.75■■■■□ 3.95
SNX5-217ENST00000606557 AQRO60306 1485 aaKnown RBP eCLIP39.74■■■■□ 3.952e-8■■■■□ 21.6
SNX5-217ENST00000606557 TDRD9Q8NDG6 1382 aaKnown RBP39.69■■■■□ 3.94
SNX5-217ENST00000606557 ABCA5Q8WWZ7 1642 aa39.64■■■■□ 3.94
SNX5-217ENST00000606557 PBRM1Q86U86 1689 aa39.58■■■■□ 3.93
SNX5-217ENST00000606557 GAPVD1Q14C86 1478 aa39.53■■■■□ 3.92
SNX5-217ENST00000606557 GRIN2BQ13224 1484 aa39.49■■■■□ 3.91
SNX5-217ENST00000606557 SNAPC4Q5SXM2 1469 aa39.42■■■■□ 3.9
SNX5-217ENST00000606557 CHD1O14646 1710 aa39.39■■■■□ 3.9
SNX5-217ENST00000606557 MAGI1Q96QZ7 1491 aaPredicted RBP39.37■■■■□ 3.89
SNX5-217ENST00000606557 ERICH3Q5RHP9 1530 aa39.29■■■■□ 3.88
SNX5-217ENST00000606557 TRIM41Q8WV44 630 aa39.25■■■■□ 3.87
SNX5-217ENST00000606557 DNAJC5Q9H3Z4 198 aa39.25■■■■□ 3.87
SNX5-217ENST00000606557 KIF27Q86VH2 1401 aa39.23■■■■□ 3.87
SNX5-217ENST00000606557 ADAMTS12P58397 1594 aa39.22■■■■□ 3.87
SNX5-217ENST00000606557 SYNJ2O15056 1496 aa39.22■■■■□ 3.87
SNX5-217ENST00000606557 OSCARQ8IYS5 282 aa39.16■■■■□ 3.86
SNX5-217ENST00000606557 FBLN2P98095 1184 aa39.12■■■■□ 3.85
SNX5-217ENST00000606557 FHAD1B1AJZ9 1412 aa39.07■■■■□ 3.85
SNX5-217ENST00000606557 CHMP7Q8WUX9 453 aaPredicted RBP39.07■■■■□ 3.85
SNX5-217ENST00000606557 CUL7Q14999 1698 aa39.03■■■■□ 3.84
SNX5-217ENST00000606557 IGF1RP08069 1367 aa39.02■■■■□ 3.84
SNX5-217ENST00000606557 GRIN2AQ12879 1464 aa39.01■■■■□ 3.84
SNX5-217ENST00000606557 RUSC2Q8N2Y8 1516 aa38.99■■■■□ 3.83
SNX5-217ENST00000606557 CHIC1Q5VXU3 224 aa38.98■■■■□ 3.83
SNX5-217ENST00000606557 CLASP1Q7Z460 1538 aa38.9■■■■□ 3.82
SNX5-217ENST00000606557 CEP170Q5SW79 1584 aa38.85■■■■□ 3.81
SNX5-217ENST00000606557 NUP160Q12769 1436 aa38.81■■■■□ 3.8
SNX5-217ENST00000606557 CARMIL1Q5VZK9 1371 aa38.79■■■■□ 3.8
SNX5-217ENST00000606557 RIMBP3CA6NJZ7 1639 aa38.67■■■■□ 3.78
SNX5-217ENST00000606557 RIMBP3BA6NNM3 1639 aa38.67■■■■□ 3.78
SNX5-217ENST00000606557 RIMBP3Q9UFD9 1639 aa38.67■■■■□ 3.78
SNX5-217ENST00000606557 EEA1Q15075 1411 aa38.66■■■■□ 3.78
SNX5-217ENST00000606557 ARHGEF11O15085 1522 aa38.65■■■■□ 3.78
SNX5-217ENST00000606557 RAPGEF2Q9Y4G8 1499 aa38.63■■■■□ 3.77
SNX5-217ENST00000606557 SHROOM2Q13796 1616 aa38.58■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms