Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
DDX39AO00148 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX39AO00148 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.2■■□□□ 1.79
DDX39AO00148 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX39AO00148 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
DDX39AO00148 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX39AO00148 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.2■■□□□ 1.78
DDX39AO00148 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX39AO00148 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.78
DDX39AO00148 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX39AO00148 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX39AO00148 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.2■■□□□ 1.78
DDX39AO00148 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX39AO00148 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX39AO00148 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX39AO00148 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
DDX39AO00148 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX39AO00148 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX39AO00148 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX39AO00148 MIR6089-201ENST00000616698 64 ntBASIC26.19■■□□□ 1.78
DDX39AO00148 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX39AO00148 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.19■■□□□ 1.78
DDX39AO00148 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
DDX39AO00148 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX39AO00148 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX39AO00148 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX39AO00148 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.18■■□□□ 1.78
DDX39AO00148 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
DDX39AO00148 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX39AO00148 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX39AO00148 AC022211.4-201ENST00000625094 2161 ntBASIC26.18■■□□□ 1.78
DDX39AO00148 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX39AO00148 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX39AO00148 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX39AO00148 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX39AO00148 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX39AO00148 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
DDX39AO00148 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX39AO00148 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX39AO00148 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX39AO00148 MTDHP2-201ENST00000601468 714 ntBASIC26.17■■□□□ 1.78
DDX39AO00148 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX39AO00148 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.16■■□□□ 1.78
DDX39AO00148 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX39AO00148 AC010997.5-201ENST00000609182 354 ntBASIC26.16■■□□□ 1.78
DDX39AO00148 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
DDX39AO00148 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.16■■□□□ 1.78
DDX39AO00148 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
DDX39AO00148 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX39AO00148 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX39AO00148 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.15■■□□□ 1.78
DDX39AO00148 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX39AO00148 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX39AO00148 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.15■■□□□ 1.78
DDX39AO00148 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX39AO00148 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX39AO00148 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
DDX39AO00148 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX39AO00148 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX39AO00148 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.14■■□□□ 1.78
DDX39AO00148 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX39AO00148 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.14■■□□□ 1.78
DDX39AO00148 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX39AO00148 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
DDX39AO00148 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX39AO00148 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
DDX39AO00148 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX39AO00148 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX39AO00148 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX39AO00148 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
DDX39AO00148 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX39AO00148 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX39AO00148 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX39AO00148 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX39AO00148 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX39AO00148 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.13■■□□□ 1.77
DDX39AO00148 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.13■■□□□ 1.77
DDX39AO00148 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX39AO00148 AC020928.2-201ENST00000588717 2197 ntBASIC26.12■■□□□ 1.77
DDX39AO00148 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX39AO00148 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX39AO00148 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
DDX39AO00148 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX39AO00148 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX39AO00148 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
DDX39AO00148 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
DDX39AO00148 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
DDX39AO00148 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.12■■□□□ 1.77
DDX39AO00148 SNX5-217ENST00000606557 1087 ntBASIC26.11■■□□□ 1.77
DDX39AO00148 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
DDX39AO00148 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
DDX39AO00148 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX39AO00148 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
DDX39AO00148 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.1■■□□□ 1.77
DDX39AO00148 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX39AO00148 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX39AO00148 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX39AO00148 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
DDX39AO00148 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.1■■□□□ 1.77
DDX39AO00148 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms