Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 AF131216.4-201ENST00000638924 1588 ntBASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 AC034268.1-201ENST00000441047 882 ntBASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 SLC47A1P1-202ENST00000449666 945 ntBASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 MIR4767-201ENST00000582827 78 ntBASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RSPO4Q2I0M5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
RSPO4Q2I0M5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RSPO4Q2I0M5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RSPO4Q2I0M5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.06■■□□□ 1.28
RSPO4Q2I0M5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RSPO4Q2I0M5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 MIR6722-201ENST00000617286 78 ntBASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 AC092437.1-201ENST00000624794 1048 ntBASIC23.05■■□□□ 1.28
RSPO4Q2I0M5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
RSPO4Q2I0M5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RSPO4Q2I0M5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.04■■□□□ 1.28
RSPO4Q2I0M5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.04■■□□□ 1.28
RSPO4Q2I0M5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RSPO4Q2I0M5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RSPO4Q2I0M5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 AC027682.1-201ENST00000562846 899 ntBASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RSPO4Q2I0M5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 AC004911.1-201ENST00000416316 871 ntBASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.02■■□□□ 1.28
RSPO4Q2I0M5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 SYT6-210ENST00000641643 1587 ntBASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 KRT18P5-201ENST00000436075 1291 ntBASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RSPO4Q2I0M5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RSPO4Q2I0M5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23■■□□□ 1.27
RSPO4Q2I0M5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RSPO4Q2I0M5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23■■□□□ 1.27
RSPO4Q2I0M5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RSPO4Q2I0M5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 AC008764.7-201ENST00000593779 1081 ntBASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 SNX5-217ENST00000606557 1087 ntBASIC22.99■■□□□ 1.27
RSPO4Q2I0M5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RSPO4Q2I0M5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RSPO4Q2I0M5 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RSPO4Q2I0M5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.96■■□□□ 1.27
RSPO4Q2I0M5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.96■■□□□ 1.27
RSPO4Q2I0M5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.96■■□□□ 1.27
RSPO4Q2I0M5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.96■■□□□ 1.27
RSPO4Q2I0M5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RSPO4Q2I0M5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RSPO4Q2I0M5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RSPO4Q2I0M5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
RSPO4Q2I0M5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.95■■□□□ 1.26
RSPO4Q2I0M5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
RSPO4Q2I0M5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RSPO4Q2I0M5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RSPO4Q2I0M5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.94■■□□□ 1.26
RSPO4Q2I0M5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms