Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.74■□□□□ 0.75
TFF1P04155 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 LONRF2P2-201ENST00000439212 571 ntBASIC19.73■□□□□ 0.75
TFF1P04155 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TFF1P04155 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TFF1P04155 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TFF1P04155 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TFF1P04155 KRT18P10-201ENST00000388836 1287 ntBASIC19.72■□□□□ 0.75
TFF1P04155 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.72■□□□□ 0.75
TFF1P04155 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TFF1P04155 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF1P04155 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF1P04155 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TFF1P04155 KRT8P33-201ENST00000508125 1423 ntBASIC19.71■□□□□ 0.75
TFF1P04155 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TFF1P04155 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.71■□□□□ 0.75
TFF1P04155 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TFF1P04155 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
TFF1P04155 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.71■□□□□ 0.75
TFF1P04155 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TFF1P04155 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TFF1P04155 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.7■□□□□ 0.74
TFF1P04155 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.7■□□□□ 0.74
TFF1P04155 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TFF1P04155 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.69■□□□□ 0.74
TFF1P04155 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.69■□□□□ 0.74
TFF1P04155 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.69■□□□□ 0.74
TFF1P04155 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TFF1P04155 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TFF1P04155 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TFF1P04155 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TFF1P04155 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TFF1P04155 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.68■□□□□ 0.74
TFF1P04155 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.68■□□□□ 0.74
TFF1P04155 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TFF1P04155 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TFF1P04155 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
TFF1P04155 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TFF1P04155 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TFF1P04155 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TFF1P04155 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TFF1P04155 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TFF1P04155 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TFF1P04155 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TFF1P04155 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.67■□□□□ 0.74
TFF1P04155 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TFF1P04155 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.67■□□□□ 0.74
TFF1P04155 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TFF1P04155 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.66■□□□□ 0.74
TFF1P04155 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.66■□□□□ 0.74
TFF1P04155 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TFF1P04155 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TFF1P04155 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TFF1P04155 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TFF1P04155 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.65■□□□□ 0.74
TFF1P04155 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TFF1P04155 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TFF1P04155 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF1P04155 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TFF1P04155 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF1P04155 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.65■□□□□ 0.74
TFF1P04155 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.65■□□□□ 0.74
TFF1P04155 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TFF1P04155 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF1P04155 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TFF1P04155 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.64■□□□□ 0.73
TFF1P04155 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TFF1P04155 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF1P04155 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TFF1P04155 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TFF1P04155 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.64■□□□□ 0.73
TFF1P04155 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.64■□□□□ 0.73
TFF1P04155 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TFF1P04155 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF1P04155 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms