Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.89■■■□□ 2.7
PCDHB2Q9Y5E7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDHB2Q9Y5E7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PCDHB2Q9Y5E7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
PCDHB2Q9Y5E7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
PCDHB2Q9Y5E7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.82■■■□□ 2.68
PCDHB2Q9Y5E7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.8■■■□□ 2.68
PCDHB2Q9Y5E7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCDHB2Q9Y5E7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCDHB2Q9Y5E7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
PCDHB2Q9Y5E7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDHB2Q9Y5E7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCDHB2Q9Y5E7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
PCDHB2Q9Y5E7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCDHB2Q9Y5E7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCDHB2Q9Y5E7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PCDHB2Q9Y5E7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
PCDHB2Q9Y5E7 AL031258.1-201ENST00000623562 325 ntBASIC31.68■■■□□ 2.66
PCDHB2Q9Y5E7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.61■■■□□ 2.65
PCDHB2Q9Y5E7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.61■■■□□ 2.65
PCDHB2Q9Y5E7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
PCDHB2Q9Y5E7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCDHB2Q9Y5E7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCDHB2Q9Y5E7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCDHB2Q9Y5E7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDHB2Q9Y5E7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCDHB2Q9Y5E7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.47■■■□□ 2.63
PCDHB2Q9Y5E7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.45■■■□□ 2.63
PCDHB2Q9Y5E7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.45■■■□□ 2.63
PCDHB2Q9Y5E7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.44■■■□□ 2.62
PCDHB2Q9Y5E7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.41■■■□□ 2.62
PCDHB2Q9Y5E7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.41■■■□□ 2.62
PCDHB2Q9Y5E7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDHB2Q9Y5E7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHB2Q9Y5E7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHB2Q9Y5E7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHB2Q9Y5E7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PCDHB2Q9Y5E7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PCDHB2Q9Y5E7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
PCDHB2Q9Y5E7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PCDHB2Q9Y5E7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.26■■■□□ 2.59
PCDHB2Q9Y5E7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
PCDHB2Q9Y5E7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.25■■■□□ 2.59
PCDHB2Q9Y5E7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.23■■■□□ 2.59
PCDHB2Q9Y5E7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
PCDHB2Q9Y5E7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCDHB2Q9Y5E7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.22■■■□□ 2.59
PCDHB2Q9Y5E7 AC145285.7-201ENST00000614819 1539 ntBASIC31.21■■■□□ 2.59
PCDHB2Q9Y5E7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.2■■■□□ 2.58
PCDHB2Q9Y5E7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
PCDHB2Q9Y5E7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.17■■■□□ 2.58
PCDHB2Q9Y5E7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHB2Q9Y5E7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHB2Q9Y5E7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHB2Q9Y5E7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.09■■■□□ 2.57
PCDHB2Q9Y5E7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHB2Q9Y5E7 RARRES2P7-201ENST00000567349 469 ntBASIC31.06■■■□□ 2.56
PCDHB2Q9Y5E7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHB2Q9Y5E7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.04■■■□□ 2.56
PCDHB2Q9Y5E7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
PCDHB2Q9Y5E7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
PCDHB2Q9Y5E7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHB2Q9Y5E7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHB2Q9Y5E7 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHB2Q9Y5E7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.99■■■□□ 2.55
PCDHB2Q9Y5E7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
PCDHB2Q9Y5E7 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.95■■■□□ 2.55
PCDHB2Q9Y5E7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.95■■■□□ 2.55
PCDHB2Q9Y5E7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.95■■■□□ 2.55
PCDHB2Q9Y5E7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.92■■■□□ 2.54
PCDHB2Q9Y5E7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
PCDHB2Q9Y5E7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.91■■■□□ 2.54
PCDHB2Q9Y5E7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.9■■■□□ 2.54
PCDHB2Q9Y5E7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.89■■■□□ 2.54
PCDHB2Q9Y5E7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCDHB2Q9Y5E7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.81■■■□□ 2.52
PCDHB2Q9Y5E7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.81■■■□□ 2.52
PCDHB2Q9Y5E7 SETD8P1-201ENST00000623146 1180 ntBASIC30.81■■■□□ 2.52
PCDHB2Q9Y5E7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHB2Q9Y5E7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.8■■■□□ 2.52
PCDHB2Q9Y5E7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
PCDHB2Q9Y5E7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDHB2Q9Y5E7 AC097358.2-201ENST00000607541 1159 ntBASIC30.78■■■□□ 2.52
PCDHB2Q9Y5E7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.76■■■□□ 2.51
PCDHB2Q9Y5E7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.74■■■□□ 2.51
PCDHB2Q9Y5E7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHB2Q9Y5E7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHB2Q9Y5E7 AC136428.2-201ENST00000563187 214 ntBASIC30.73■■■□□ 2.51
PCDHB2Q9Y5E7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.71■■■□□ 2.51
PCDHB2Q9Y5E7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHB2Q9Y5E7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHB2Q9Y5E7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHB2Q9Y5E7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHB2Q9Y5E7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.63■■■□□ 2.49
PCDHB2Q9Y5E7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHB2Q9Y5E7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHB2Q9Y5E7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
PCDHB2Q9Y5E7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.6■■■□□ 2.49
PCDHB2Q9Y5E7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHB2Q9Y5E7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms