Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 DYNLL1-208ENST00000550178 581 ntBASIC33.16■■■□□ 2.9
DDX41Q9UJV9 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
DDX41Q9UJV9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
DDX41Q9UJV9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.13■■■□□ 2.89
DDX41Q9UJV9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.1■■■□□ 2.89
DDX41Q9UJV9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.08■■■□□ 2.89
DDX41Q9UJV9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
DDX41Q9UJV9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
DDX41Q9UJV9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.06■■■□□ 2.88
DDX41Q9UJV9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
DDX41Q9UJV9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
DDX41Q9UJV9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
DDX41Q9UJV9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.99■■■□□ 2.87
DDX41Q9UJV9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
DDX41Q9UJV9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
DDX41Q9UJV9 AL031258.1-201ENST00000623562 325 ntBASIC32.95■■■□□ 2.87
DDX41Q9UJV9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
DDX41Q9UJV9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.9■■■□□ 2.86
DDX41Q9UJV9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.87■■■□□ 2.85
DDX41Q9UJV9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.84■■■□□ 2.85
DDX41Q9UJV9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
DDX41Q9UJV9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
DDX41Q9UJV9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
DDX41Q9UJV9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
DDX41Q9UJV9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
DDX41Q9UJV9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
DDX41Q9UJV9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
DDX41Q9UJV9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.68■■■□□ 2.82
DDX41Q9UJV9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.65■■■□□ 2.82
DDX41Q9UJV9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.65■■■□□ 2.82
DDX41Q9UJV9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.65■■■□□ 2.82
DDX41Q9UJV9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
DDX41Q9UJV9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.62■■■□□ 2.81
DDX41Q9UJV9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.59■■■□□ 2.81
DDX41Q9UJV9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
DDX41Q9UJV9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
DDX41Q9UJV9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
DDX41Q9UJV9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
DDX41Q9UJV9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
DDX41Q9UJV9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
DDX41Q9UJV9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
DDX41Q9UJV9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
DDX41Q9UJV9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.48■■■□□ 2.79
DDX41Q9UJV9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
DDX41Q9UJV9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.46■■■□□ 2.79
DDX41Q9UJV9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.45■■■□□ 2.79
DDX41Q9UJV9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
DDX41Q9UJV9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.44■■■□□ 2.78
DDX41Q9UJV9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
DDX41Q9UJV9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
DDX41Q9UJV9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
DDX41Q9UJV9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
DDX41Q9UJV9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.36■■■□□ 2.77
DDX41Q9UJV9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
DDX41Q9UJV9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
DDX41Q9UJV9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.33■■■□□ 2.77
DDX41Q9UJV9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
DDX41Q9UJV9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
DDX41Q9UJV9 AC145285.7-201ENST00000614819 1539 ntBASIC32.3■■■□□ 2.76
DDX41Q9UJV9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
DDX41Q9UJV9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
DDX41Q9UJV9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.28■■■□□ 2.76
DDX41Q9UJV9 RARRES2P7-201ENST00000567349 469 ntBASIC32.27■■■□□ 2.76
DDX41Q9UJV9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
DDX41Q9UJV9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.24■■■□□ 2.75
DDX41Q9UJV9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
DDX41Q9UJV9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
DDX41Q9UJV9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.2■■■□□ 2.75
DDX41Q9UJV9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
DDX41Q9UJV9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
DDX41Q9UJV9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.18■■■□□ 2.74
DDX41Q9UJV9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.17■■■□□ 2.74
DDX41Q9UJV9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.17■■■□□ 2.74
DDX41Q9UJV9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DDX41Q9UJV9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
DDX41Q9UJV9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.15■■■□□ 2.74
DDX41Q9UJV9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
DDX41Q9UJV9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.11■■■□□ 2.73
DDX41Q9UJV9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
DDX41Q9UJV9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.1■■■□□ 2.73
DDX41Q9UJV9 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.1■■■□□ 2.73
DDX41Q9UJV9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.1■■■□□ 2.73
DDX41Q9UJV9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.08■■■□□ 2.73
DDX41Q9UJV9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.08■■■□□ 2.73
DDX41Q9UJV9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.04■■■□□ 2.72
DDX41Q9UJV9 SETD8P1-201ENST00000623146 1180 ntBASIC32.03■■■□□ 2.72
DDX41Q9UJV9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
DDX41Q9UJV9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
DDX41Q9UJV9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.02■■■□□ 2.72
DDX41Q9UJV9 AC097358.2-201ENST00000607541 1159 ntBASIC32.01■■■□□ 2.71
DDX41Q9UJV9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
DDX41Q9UJV9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
DDX41Q9UJV9 AC136428.2-201ENST00000563187 214 ntBASIC31.98■■■□□ 2.71
DDX41Q9UJV9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.98■■■□□ 2.71
DDX41Q9UJV9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
DDX41Q9UJV9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.96■■■□□ 2.71
DDX41Q9UJV9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.96■■■□□ 2.71
DDX41Q9UJV9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.96■■■□□ 2.71
DDX41Q9UJV9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.71
DDX41Q9UJV9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms