Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LRIT1Q9P2V4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LRIT1Q9P2V4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
LRIT1Q9P2V4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.31■■■□□ 2.12
LRIT1Q9P2V4 AL031258.1-201ENST00000623562 325 ntBASIC28.28■■■□□ 2.12
LRIT1Q9P2V4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
LRIT1Q9P2V4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
LRIT1Q9P2V4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.22■■■□□ 2.11
LRIT1Q9P2V4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
LRIT1Q9P2V4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
LRIT1Q9P2V4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.17■■■□□ 2.1
LRIT1Q9P2V4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
LRIT1Q9P2V4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LRIT1Q9P2V4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LRIT1Q9P2V4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.09■■■□□ 2.09
LRIT1Q9P2V4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.09■■■□□ 2.09
LRIT1Q9P2V4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LRIT1Q9P2V4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
LRIT1Q9P2V4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.05■■■□□ 2.08
LRIT1Q9P2V4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LRIT1Q9P2V4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
LRIT1Q9P2V4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LRIT1Q9P2V4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
LRIT1Q9P2V4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.98■■■□□ 2.07
LRIT1Q9P2V4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.96■■■□□ 2.07
LRIT1Q9P2V4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
LRIT1Q9P2V4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.94■■■□□ 2.06
LRIT1Q9P2V4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
LRIT1Q9P2V4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.91■■■□□ 2.06
LRIT1Q9P2V4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.88■■■□□ 2.05
LRIT1Q9P2V4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
LRIT1Q9P2V4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.86■■■□□ 2.05
LRIT1Q9P2V4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
LRIT1Q9P2V4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
LRIT1Q9P2V4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
LRIT1Q9P2V4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
LRIT1Q9P2V4 RARRES2P7-201ENST00000567349 469 ntBASIC27.81■■■□□ 2.04
LRIT1Q9P2V4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
LRIT1Q9P2V4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
LRIT1Q9P2V4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
LRIT1Q9P2V4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.77■■■□□ 2.04
LRIT1Q9P2V4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.76■■■□□ 2.04
LRIT1Q9P2V4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.75■■■□□ 2.03
LRIT1Q9P2V4 AC145285.7-201ENST00000614819 1539 ntBASIC27.74■■■□□ 2.03
LRIT1Q9P2V4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
LRIT1Q9P2V4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LRIT1Q9P2V4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.71■■■□□ 2.03
LRIT1Q9P2V4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LRIT1Q9P2V4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.7■■■□□ 2.02
LRIT1Q9P2V4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.68■■■□□ 2.02
LRIT1Q9P2V4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.68■■■□□ 2.02
LRIT1Q9P2V4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
LRIT1Q9P2V4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.66■■■□□ 2.02
LRIT1Q9P2V4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.66■■■□□ 2.02
LRIT1Q9P2V4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
LRIT1Q9P2V4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.64■■■□□ 2.02
LRIT1Q9P2V4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.62■■■□□ 2.01
LRIT1Q9P2V4 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.61■■■□□ 2.01
LRIT1Q9P2V4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LRIT1Q9P2V4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
LRIT1Q9P2V4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.6■■■□□ 2.01
LRIT1Q9P2V4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.58■■■□□ 2.01
LRIT1Q9P2V4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.56■■■□□ 2
LRIT1Q9P2V4 AC097358.2-201ENST00000607541 1159 ntBASIC27.56■■■□□ 2
LRIT1Q9P2V4 SETD8P1-201ENST00000623146 1180 ntBASIC27.56■■■□□ 2
LRIT1Q9P2V4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
LRIT1Q9P2V4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.54■■■□□ 2
LRIT1Q9P2V4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.54■■■□□ 2
LRIT1Q9P2V4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
LRIT1Q9P2V4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
LRIT1Q9P2V4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
LRIT1Q9P2V4 AC136428.2-201ENST00000563187 214 ntBASIC27.45■■□□□ 1.98
LRIT1Q9P2V4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
LRIT1Q9P2V4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
LRIT1Q9P2V4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
LRIT1Q9P2V4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
LRIT1Q9P2V4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
LRIT1Q9P2V4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.39■■□□□ 1.98
LRIT1Q9P2V4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.39■■□□□ 1.98
LRIT1Q9P2V4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.38■■□□□ 1.97
LRIT1Q9P2V4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
LRIT1Q9P2V4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LRIT1Q9P2V4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LRIT1Q9P2V4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.33■■□□□ 1.97
LRIT1Q9P2V4 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LRIT1Q9P2V4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.32■■□□□ 1.96
LRIT1Q9P2V4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.32■■□□□ 1.96
LRIT1Q9P2V4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.32■■□□□ 1.96
LRIT1Q9P2V4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
LRIT1Q9P2V4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LRIT1Q9P2V4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.28■■□□□ 1.96
LRIT1Q9P2V4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LRIT1Q9P2V4 SUZ12P1-203ENST00000578195 985 ntBASIC27.27■■□□□ 1.96
LRIT1Q9P2V4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
LRIT1Q9P2V4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRIT1Q9P2V4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRIT1Q9P2V4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LRIT1Q9P2V4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
LRIT1Q9P2V4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LRIT1Q9P2V4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms