Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 RPS2P35-201ENST00000443417 897 ntBASIC24.79■■□□□ 1.56
GSX1Q9H4S2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
GSX1Q9H4S2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC24.76■■□□□ 1.55
GSX1Q9H4S2 RARRES2P7-201ENST00000567349 469 ntBASIC24.76■■□□□ 1.55
GSX1Q9H4S2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GSX1Q9H4S2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.75■■□□□ 1.55
GSX1Q9H4S2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GSX1Q9H4S2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GSX1Q9H4S2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
GSX1Q9H4S2 AC097358.2-201ENST00000607541 1159 ntBASIC24.65■■□□□ 1.54
GSX1Q9H4S2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.64■■□□□ 1.54
GSX1Q9H4S2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
GSX1Q9H4S2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
GSX1Q9H4S2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.6■■□□□ 1.53
GSX1Q9H4S2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
GSX1Q9H4S2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.52■■□□□ 1.52
GSX1Q9H4S2 AC136428.2-201ENST00000563187 214 ntBASIC24.51■■□□□ 1.51
GSX1Q9H4S2 SUZ12P1-203ENST00000578195 985 ntBASIC24.51■■□□□ 1.51
GSX1Q9H4S2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
GSX1Q9H4S2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
GSX1Q9H4S2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.45■■□□□ 1.5
GSX1Q9H4S2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
GSX1Q9H4S2 SETD8P1-201ENST00000623146 1180 ntBASIC24.43■■□□□ 1.5
GSX1Q9H4S2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
GSX1Q9H4S2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
GSX1Q9H4S2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GSX1Q9H4S2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
GSX1Q9H4S2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
GSX1Q9H4S2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
GSX1Q9H4S2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.35■■□□□ 1.49
GSX1Q9H4S2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.34■■□□□ 1.49
GSX1Q9H4S2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
GSX1Q9H4S2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
GSX1Q9H4S2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.32■■□□□ 1.48
GSX1Q9H4S2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
GSX1Q9H4S2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
GSX1Q9H4S2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
GSX1Q9H4S2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
GSX1Q9H4S2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
GSX1Q9H4S2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
GSX1Q9H4S2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
GSX1Q9H4S2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.26■■□□□ 1.47
GSX1Q9H4S2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
GSX1Q9H4S2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
GSX1Q9H4S2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.21■■□□□ 1.47
GSX1Q9H4S2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
GSX1Q9H4S2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.2■■□□□ 1.46
GSX1Q9H4S2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.19■■□□□ 1.46
GSX1Q9H4S2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.19■■□□□ 1.46
GSX1Q9H4S2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
GSX1Q9H4S2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
GSX1Q9H4S2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.16■■□□□ 1.46
GSX1Q9H4S2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
GSX1Q9H4S2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
GSX1Q9H4S2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.12■■□□□ 1.45
GSX1Q9H4S2 AL162393.1-201ENST00000437852 946 ntBASIC24.12■■□□□ 1.45
GSX1Q9H4S2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.12■■□□□ 1.45
GSX1Q9H4S2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GSX1Q9H4S2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
GSX1Q9H4S2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GSX1Q9H4S2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
GSX1Q9H4S2 MIR7108-201ENST00000614319 87 ntBASIC24.07■■□□□ 1.44
GSX1Q9H4S2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GSX1Q9H4S2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GSX1Q9H4S2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
GSX1Q9H4S2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.05■■□□□ 1.44
GSX1Q9H4S2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.05■■□□□ 1.44
GSX1Q9H4S2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
GSX1Q9H4S2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
GSX1Q9H4S2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.02■■□□□ 1.44
GSX1Q9H4S2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.01■■□□□ 1.43
GSX1Q9H4S2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
GSX1Q9H4S2 ABHD17AP4-201ENST00000411545 909 ntBASIC23.98■■□□□ 1.43
GSX1Q9H4S2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
GSX1Q9H4S2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
GSX1Q9H4S2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
GSX1Q9H4S2 CAHM-201ENST00000604200 896 ntBASIC23.95■■□□□ 1.42
GSX1Q9H4S2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
GSX1Q9H4S2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC23.94■■□□□ 1.42
GSX1Q9H4S2 AP006261.1-201ENST00000584783 668 ntBASIC23.93■■□□□ 1.42
GSX1Q9H4S2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
GSX1Q9H4S2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
GSX1Q9H4S2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC23.9■■□□□ 1.42
GSX1Q9H4S2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.9■■□□□ 1.42
GSX1Q9H4S2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
GSX1Q9H4S2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
GSX1Q9H4S2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.88■■□□□ 1.41
GSX1Q9H4S2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
GSX1Q9H4S2 HLA-V-202ENST00000446817 847 ntBASIC23.87■■□□□ 1.41
GSX1Q9H4S2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
GSX1Q9H4S2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC23.85■■□□□ 1.41
GSX1Q9H4S2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
GSX1Q9H4S2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
GSX1Q9H4S2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
GSX1Q9H4S2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GSX1Q9H4S2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GSX1Q9H4S2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GSX1Q9H4S2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.81■■□□□ 1.4
GSX1Q9H4S2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.8■■□□□ 1.4
GSX1Q9H4S2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms