Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
KRTAP4-3Q9BYR4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
KRTAP4-3Q9BYR4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
KRTAP4-3Q9BYR4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
KRTAP4-3Q9BYR4 AL031258.1-201ENST00000623562 325 ntBASIC9.92□□□□□ -0.82
KRTAP4-3Q9BYR4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP4-3Q9BYR4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP4-3Q9BYR4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
KRTAP4-3Q9BYR4 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC9.91□□□□□ -0.82
KRTAP4-3Q9BYR4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC9.9□□□□□ -0.82
KRTAP4-3Q9BYR4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-3Q9BYR4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
KRTAP4-3Q9BYR4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
KRTAP4-3Q9BYR4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC9.89□□□□□ -0.83
KRTAP4-3Q9BYR4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
KRTAP4-3Q9BYR4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-3Q9BYR4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
KRTAP4-3Q9BYR4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP4-3Q9BYR4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP4-3Q9BYR4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
KRTAP4-3Q9BYR4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC9.82□□□□□ -0.84
KRTAP4-3Q9BYR4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC9.82□□□□□ -0.84
KRTAP4-3Q9BYR4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
KRTAP4-3Q9BYR4 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
KRTAP4-3Q9BYR4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 AC145285.7-201ENST00000614819 1539 ntBASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC9.78□□□□□ -0.84
KRTAP4-3Q9BYR4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
KRTAP4-3Q9BYR4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP4-3Q9BYR4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP4-3Q9BYR4 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP4-3Q9BYR4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-3Q9BYR4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP4-3Q9BYR4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP4-3Q9BYR4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP4-3Q9BYR4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC9.72□□□□□ -0.85
KRTAP4-3Q9BYR4 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
KRTAP4-3Q9BYR4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
KRTAP4-3Q9BYR4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC9.71□□□□□ -0.86
KRTAP4-3Q9BYR4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC9.71□□□□□ -0.86
KRTAP4-3Q9BYR4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-3Q9BYR4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-3Q9BYR4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-3Q9BYR4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP4-3Q9BYR4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-3Q9BYR4 RARRES2P7-201ENST00000567349 469 ntBASIC9.68□□□□□ -0.86
KRTAP4-3Q9BYR4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP4-3Q9BYR4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP4-3Q9BYR4 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC9.66□□□□□ -0.86
KRTAP4-3Q9BYR4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP4-3Q9BYR4 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
KRTAP4-3Q9BYR4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
KRTAP4-3Q9BYR4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC9.65□□□□□ -0.86
KRTAP4-3Q9BYR4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC9.65□□□□□ -0.86
KRTAP4-3Q9BYR4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
KRTAP4-3Q9BYR4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP4-3Q9BYR4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP4-3Q9BYR4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC9.63□□□□□ -0.87
KRTAP4-3Q9BYR4 AC136428.2-201ENST00000563187 214 ntBASIC9.63□□□□□ -0.87
KRTAP4-3Q9BYR4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP4-3Q9BYR4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 AC097358.2-201ENST00000607541 1159 ntBASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 SETD8P1-201ENST00000623146 1180 ntBASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP4-3Q9BYR4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP4-3Q9BYR4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP4-3Q9BYR4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC9.6□□□□□ -0.87
KRTAP4-3Q9BYR4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP4-3Q9BYR4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP4-3Q9BYR4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-3Q9BYR4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-3Q9BYR4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-3Q9BYR4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP4-3Q9BYR4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-3Q9BYR4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-3Q9BYR4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-3Q9BYR4 MVK-208ENST00000539696 608 ntTSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms