Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
DDX60Q8IY21 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
DDX60Q8IY21 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
DDX60Q8IY21 AL031258.1-201ENST00000623562 325 ntBASIC36.54■■■■□ 3.44
DDX60Q8IY21 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC36.53■■■■□ 3.44
DDX60Q8IY21 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC36.53■■■■□ 3.44
DDX60Q8IY21 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
DDX60Q8IY21 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.45■■■■□ 3.43
DDX60Q8IY21 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
DDX60Q8IY21 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC36.41■■■■□ 3.42
DDX60Q8IY21 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.42
DDX60Q8IY21 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
DDX60Q8IY21 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.38■■■■□ 3.41
DDX60Q8IY21 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC36.35■■■■□ 3.41
DDX60Q8IY21 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC36.33■■■■□ 3.41
DDX60Q8IY21 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
DDX60Q8IY21 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
DDX60Q8IY21 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
DDX60Q8IY21 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC36.28■■■■□ 3.4
DDX60Q8IY21 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC36.28■■■■□ 3.4
DDX60Q8IY21 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
DDX60Q8IY21 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
DDX60Q8IY21 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC36.26■■■■□ 3.4
DDX60Q8IY21 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC36.26■■■■□ 3.4
DDX60Q8IY21 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC36.22■■■■□ 3.39
DDX60Q8IY21 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.16■■■■□ 3.38
DDX60Q8IY21 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC36.12■■■■□ 3.37
DDX60Q8IY21 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC36.07■■■■□ 3.36
DDX60Q8IY21 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
DDX60Q8IY21 EBPL-203ENST00000378270 579 ntTSL 2 BASIC36.05■■■■□ 3.36
DDX60Q8IY21 RARRES2P7-201ENST00000567349 469 ntBASIC36.03■■■■□ 3.36
DDX60Q8IY21 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC36.02■■■■□ 3.36
DDX60Q8IY21 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.01■■■■□ 3.35
DDX60Q8IY21 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
DDX60Q8IY21 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC35.99■■■■□ 3.35
DDX60Q8IY21 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC35.99■■■■□ 3.35
DDX60Q8IY21 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC35.99■■■■□ 3.35
DDX60Q8IY21 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
DDX60Q8IY21 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC35.95■■■■□ 3.35
DDX60Q8IY21 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
DDX60Q8IY21 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC35.92■■■■□ 3.34
DDX60Q8IY21 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC35.88■■■■□ 3.33
DDX60Q8IY21 AC136428.2-201ENST00000563187 214 ntBASIC35.86■■■■□ 3.33
DDX60Q8IY21 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
DDX60Q8IY21 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC35.83■■■■□ 3.33
DDX60Q8IY21 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.33
DDX60Q8IY21 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC35.81■■■■□ 3.32
DDX60Q8IY21 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC35.8■■■■□ 3.32
DDX60Q8IY21 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC35.79■■■■□ 3.32
DDX60Q8IY21 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC35.78■■■■□ 3.32
DDX60Q8IY21 AC145285.7-201ENST00000614819 1539 ntBASIC35.77■■■■□ 3.32
DDX60Q8IY21 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC35.73■■■■□ 3.31
DDX60Q8IY21 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
DDX60Q8IY21 SETD8P1-201ENST00000623146 1180 ntBASIC35.71■■■■□ 3.31
DDX60Q8IY21 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC35.68■■■■□ 3.3
DDX60Q8IY21 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
DDX60Q8IY21 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
DDX60Q8IY21 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
DDX60Q8IY21 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC35.62■■■■□ 3.29
DDX60Q8IY21 KLF16-203ENST00000592313 508 ntTSL 3 BASIC35.62■■■■□ 3.29
DDX60Q8IY21 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC35.61■■■■□ 3.29
DDX60Q8IY21 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC35.6■■■■□ 3.29
DDX60Q8IY21 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
DDX60Q8IY21 AC097358.2-201ENST00000607541 1159 ntBASIC35.59■■■■□ 3.29
DDX60Q8IY21 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
DDX60Q8IY21 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC35.58■■■■□ 3.29
DDX60Q8IY21 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC35.58■■■■□ 3.29
DDX60Q8IY21 SUZ12P1-203ENST00000578195 985 ntBASIC35.57■■■■□ 3.28
DDX60Q8IY21 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
DDX60Q8IY21 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC35.55■■■■□ 3.28
DDX60Q8IY21 MVK-208ENST00000539696 608 ntTSL 5 BASIC35.55■■■■□ 3.28
DDX60Q8IY21 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC35.55■■■■□ 3.28
DDX60Q8IY21 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC35.53■■■■□ 3.28
DDX60Q8IY21 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
DDX60Q8IY21 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC35.51■■■■□ 3.28
DDX60Q8IY21 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
DDX60Q8IY21 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC35.47■■■■□ 3.27
DDX60Q8IY21 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC35.47■■■■□ 3.27
DDX60Q8IY21 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC35.46■■■■□ 3.27
DDX60Q8IY21 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
DDX60Q8IY21 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.38■■■■□ 3.25
DDX60Q8IY21 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
DDX60Q8IY21 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.35■■■■□ 3.25
DDX60Q8IY21 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
DDX60Q8IY21 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
DDX60Q8IY21 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC35.32■■■■□ 3.25
DDX60Q8IY21 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
DDX60Q8IY21 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.29■■■■□ 3.24
DDX60Q8IY21 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC35.24■■■■□ 3.23
DDX60Q8IY21 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
DDX60Q8IY21 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
DDX60Q8IY21 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
DDX60Q8IY21 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
DDX60Q8IY21 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
DDX60Q8IY21 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
DDX60Q8IY21 AL133380.1-201ENST00000506013 324 ntBASIC35.2■■■■□ 3.23
DDX60Q8IY21 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC35.19■■■■□ 3.22
DDX60Q8IY21 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC35.17■■■■□ 3.22
DDX60Q8IY21 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC35.17■■■■□ 3.22
DDX60Q8IY21 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms