Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.51■■■□□ 2.63
PALB2Q86YC2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PALB2Q86YC2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
PALB2Q86YC2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.42■■■□□ 2.62
PALB2Q86YC2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PALB2Q86YC2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PALB2Q86YC2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
PALB2Q86YC2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.38■■■□□ 2.61
PALB2Q86YC2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PALB2Q86YC2 DYNLL1-208ENST00000550178 581 ntBASIC31.36■■■□□ 2.61
PALB2Q86YC2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
PALB2Q86YC2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.31■■■□□ 2.6
PALB2Q86YC2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
PALB2Q86YC2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
PALB2Q86YC2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.28■■■□□ 2.6
PALB2Q86YC2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
PALB2Q86YC2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.24■■■□□ 2.59
PALB2Q86YC2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PALB2Q86YC2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
PALB2Q86YC2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PALB2Q86YC2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PALB2Q86YC2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PALB2Q86YC2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PALB2Q86YC2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PALB2Q86YC2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PALB2Q86YC2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PALB2Q86YC2 AL031258.1-201ENST00000623562 325 ntBASIC31.11■■■□□ 2.57
PALB2Q86YC2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PALB2Q86YC2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PALB2Q86YC2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PALB2Q86YC2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
PALB2Q86YC2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PALB2Q86YC2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PALB2Q86YC2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PALB2Q86YC2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.99■■■□□ 2.55
PALB2Q86YC2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.98■■■□□ 2.55
PALB2Q86YC2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
PALB2Q86YC2 AC145285.7-201ENST00000614819 1539 ntBASIC30.97■■■□□ 2.55
PALB2Q86YC2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.97■■■□□ 2.55
PALB2Q86YC2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PALB2Q86YC2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
PALB2Q86YC2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.91■■■□□ 2.54
PALB2Q86YC2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.91■■■□□ 2.54
PALB2Q86YC2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
PALB2Q86YC2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
PALB2Q86YC2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
PALB2Q86YC2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PALB2Q86YC2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PALB2Q86YC2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PALB2Q86YC2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
PALB2Q86YC2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PALB2Q86YC2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.79■■■□□ 2.52
PALB2Q86YC2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PALB2Q86YC2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.77■■■□□ 2.52
PALB2Q86YC2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.75■■■□□ 2.51
PALB2Q86YC2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PALB2Q86YC2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.73■■■□□ 2.51
PALB2Q86YC2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.73■■■□□ 2.51
PALB2Q86YC2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.71■■■□□ 2.51
PALB2Q86YC2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PALB2Q86YC2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PALB2Q86YC2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
PALB2Q86YC2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PALB2Q86YC2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PALB2Q86YC2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
PALB2Q86YC2 RARRES2P7-201ENST00000567349 469 ntBASIC30.63■■■□□ 2.49
PALB2Q86YC2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PALB2Q86YC2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PALB2Q86YC2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
PALB2Q86YC2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.6■■■□□ 2.49
PALB2Q86YC2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
PALB2Q86YC2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.59■■■□□ 2.49
PALB2Q86YC2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.59■■■□□ 2.49
PALB2Q86YC2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PALB2Q86YC2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PALB2Q86YC2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
PALB2Q86YC2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
PALB2Q86YC2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PALB2Q86YC2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.55■■■□□ 2.48
PALB2Q86YC2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PALB2Q86YC2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.53■■■□□ 2.48
PALB2Q86YC2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PALB2Q86YC2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PALB2Q86YC2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.48■■■□□ 2.47
PALB2Q86YC2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PALB2Q86YC2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
PALB2Q86YC2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.47■■■□□ 2.47
PALB2Q86YC2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.45■■■□□ 2.47
PALB2Q86YC2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PALB2Q86YC2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PALB2Q86YC2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PALB2Q86YC2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.41■■■□□ 2.46
PALB2Q86YC2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PALB2Q86YC2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PALB2Q86YC2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.4■■■□□ 2.46
PALB2Q86YC2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.4■■■□□ 2.46
PALB2Q86YC2 AC097358.2-201ENST00000607541 1159 ntBASIC30.38■■■□□ 2.45
PALB2Q86YC2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.37■■■□□ 2.45
PALB2Q86YC2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.34■■■□□ 2.45
PALB2Q86YC2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms