Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 HLA-V-202ENST00000446817 847 ntBASIC16.55■□□□□ 0.24
RNF213Q63HN8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF213Q63HN8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RNF213Q63HN8 AL031258.1-201ENST00000623562 325 ntBASIC16.51■□□□□ 0.23
RNF213Q63HN8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF213Q63HN8 AL162393.1-201ENST00000437852 946 ntBASIC16.49■□□□□ 0.23
RNF213Q63HN8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF213Q63HN8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF213Q63HN8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF213Q63HN8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF213Q63HN8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF213Q63HN8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF213Q63HN8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF213Q63HN8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF213Q63HN8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF213Q63HN8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF213Q63HN8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF213Q63HN8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF213Q63HN8 MIR7108-201ENST00000614319 87 ntBASIC16.38■□□□□ 0.21
RNF213Q63HN8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF213Q63HN8 ABHD17AP4-201ENST00000411545 909 ntBASIC16.37■□□□□ 0.21
RNF213Q63HN8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.34■□□□□ 0.21
RNF213Q63HN8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF213Q63HN8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF213Q63HN8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF213Q63HN8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF213Q63HN8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.27■□□□□ 0.19
RNF213Q63HN8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF213Q63HN8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF213Q63HN8 SETD8P1-201ENST00000623146 1180 ntBASIC16.24■□□□□ 0.19
RNF213Q63HN8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
RNF213Q63HN8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF213Q63HN8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF213Q63HN8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF213Q63HN8 AP006261.1-201ENST00000584783 668 ntBASIC16.18■□□□□ 0.18
RNF213Q63HN8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF213Q63HN8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF213Q63HN8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF213Q63HN8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF213Q63HN8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RNF213Q63HN8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RNF213Q63HN8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RNF213Q63HN8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.11■□□□□ 0.17
RNF213Q63HN8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF213Q63HN8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF213Q63HN8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF213Q63HN8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF213Q63HN8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF213Q63HN8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF213Q63HN8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF213Q63HN8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF213Q63HN8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF213Q63HN8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF213Q63HN8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF213Q63HN8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF213Q63HN8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF213Q63HN8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF213Q63HN8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF213Q63HN8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF213Q63HN8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.02■□□□□ 0.16
RNF213Q63HN8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
RNF213Q63HN8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC16■□□□□ 0.15
RNF213Q63HN8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF213Q63HN8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF213Q63HN8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF213Q63HN8 HSD17B1P1-201ENST00000590052 955 ntBASIC15.99■□□□□ 0.15
RNF213Q63HN8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF213Q63HN8 CAHM-201ENST00000604200 896 ntBASIC15.98■□□□□ 0.15
RNF213Q63HN8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF213Q63HN8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF213Q63HN8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF213Q63HN8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF213Q63HN8 MIR4449-201ENST00000578365 66 ntBASIC15.96■□□□□ 0.15
RNF213Q63HN8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF213Q63HN8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF213Q63HN8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC15.94■□□□□ 0.14
RNF213Q63HN8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF213Q63HN8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF213Q63HN8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF213Q63HN8 AC087741.3-201ENST00000624270 1347 ntBASIC15.91■□□□□ 0.14
RNF213Q63HN8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF213Q63HN8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RNF213Q63HN8 AL391121.1-201ENST00000607967 1349 ntBASIC15.9■□□□□ 0.14
RNF213Q63HN8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF213Q63HN8 HNRNPLP2-201ENST00000568980 1570 ntBASIC15.88■□□□□ 0.13
RNF213Q63HN8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF213Q63HN8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF213Q63HN8 MIR3665-201ENST00000578708 105 ntBASIC15.87■□□□□ 0.13
RNF213Q63HN8 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF213Q63HN8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF213Q63HN8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF213Q63HN8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF213Q63HN8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF213Q63HN8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF213Q63HN8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF213Q63HN8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF213Q63HN8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF213Q63HN8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF213Q63HN8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF213Q63HN8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms