Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
COL13A1Q5TAT6 AC136428.2-201ENST00000563187 214 ntBASIC35.08■■■■□ 3.21
COL13A1Q5TAT6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
COL13A1Q5TAT6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC35.03■■■■□ 3.2
COL13A1Q5TAT6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC35.03■■■■□ 3.2
COL13A1Q5TAT6 MIR7108-201ENST00000614319 87 ntBASIC35.02■■■■□ 3.2
COL13A1Q5TAT6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
COL13A1Q5TAT6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
COL13A1Q5TAT6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.88■■■■□ 3.17
COL13A1Q5TAT6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC34.85■■■■□ 3.17
COL13A1Q5TAT6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC34.83■■■■□ 3.17
COL13A1Q5TAT6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
COL13A1Q5TAT6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC34.81■■■■□ 3.16
COL13A1Q5TAT6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC34.81■■■■□ 3.16
COL13A1Q5TAT6 HLA-V-202ENST00000446817 847 ntBASIC34.8■■■■□ 3.16
COL13A1Q5TAT6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.78■■■■□ 3.16
COL13A1Q5TAT6 SETD8P1-201ENST00000623146 1180 ntBASIC34.77■■■■□ 3.16
COL13A1Q5TAT6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
COL13A1Q5TAT6 ABHD17AP4-201ENST00000411545 909 ntBASIC34.74■■■■□ 3.15
COL13A1Q5TAT6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
COL13A1Q5TAT6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC34.72■■■■□ 3.15
COL13A1Q5TAT6 AL162393.1-201ENST00000437852 946 ntBASIC34.71■■■■□ 3.15
COL13A1Q5TAT6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
COL13A1Q5TAT6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC34.69■■■■□ 3.14
COL13A1Q5TAT6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC34.64■■■■□ 3.14
COL13A1Q5TAT6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
COL13A1Q5TAT6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
COL13A1Q5TAT6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL13A1Q5TAT6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.57■■■■□ 3.12
COL13A1Q5TAT6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC34.52■■■■□ 3.12
COL13A1Q5TAT6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
COL13A1Q5TAT6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
COL13A1Q5TAT6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC34.46■■■■□ 3.11
COL13A1Q5TAT6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
COL13A1Q5TAT6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC34.45■■■■□ 3.11
COL13A1Q5TAT6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
COL13A1Q5TAT6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
COL13A1Q5TAT6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
COL13A1Q5TAT6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC34.4■■■■□ 3.1
COL13A1Q5TAT6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
COL13A1Q5TAT6 AP006261.1-201ENST00000584783 668 ntBASIC34.35■■■■□ 3.09
COL13A1Q5TAT6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC34.34■■■■□ 3.09
COL13A1Q5TAT6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
COL13A1Q5TAT6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
COL13A1Q5TAT6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
COL13A1Q5TAT6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.25■■■■□ 3.07
COL13A1Q5TAT6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC34.22■■■■□ 3.07
COL13A1Q5TAT6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC34.21■■■■□ 3.07
COL13A1Q5TAT6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC34.21■■■■□ 3.07
COL13A1Q5TAT6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC34.2■■■■□ 3.07
COL13A1Q5TAT6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.19■■■■□ 3.06
COL13A1Q5TAT6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
COL13A1Q5TAT6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.17■■■■□ 3.06
COL13A1Q5TAT6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
COL13A1Q5TAT6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
COL13A1Q5TAT6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC34.13■■■■□ 3.05
COL13A1Q5TAT6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC34.12■■■■□ 3.05
COL13A1Q5TAT6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.1■■■■□ 3.05
COL13A1Q5TAT6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.1■■■■□ 3.05
COL13A1Q5TAT6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC34.05■■■■□ 3.04
COL13A1Q5TAT6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC34.03■■■■□ 3.04
COL13A1Q5TAT6 CAHM-201ENST00000604200 896 ntBASIC34.03■■■■□ 3.04
COL13A1Q5TAT6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC34.02■■■■□ 3.04
COL13A1Q5TAT6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.01■■■■□ 3.03
COL13A1Q5TAT6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.99■■■■□ 3.03
COL13A1Q5TAT6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
COL13A1Q5TAT6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
COL13A1Q5TAT6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.94■■■■□ 3.02
COL13A1Q5TAT6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL13A1Q5TAT6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.89■■■■□ 3.02
COL13A1Q5TAT6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
COL13A1Q5TAT6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC33.88■■■■□ 3.01
COL13A1Q5TAT6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC33.88■■■■□ 3.01
COL13A1Q5TAT6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.86■■■■□ 3.01
COL13A1Q5TAT6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC33.84■■■■□ 3.01
COL13A1Q5TAT6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.79■■■■□ 3
COL13A1Q5TAT6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC33.79■■■■□ 3
COL13A1Q5TAT6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC33.78■■■■□ 3
COL13A1Q5TAT6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC33.77■■■■□ 3
COL13A1Q5TAT6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.77■■■■□ 3
COL13A1Q5TAT6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC33.76■■■□□ 2.99
COL13A1Q5TAT6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC33.76■■■□□ 2.99
COL13A1Q5TAT6 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.76■■■□□ 2.99
COL13A1Q5TAT6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
COL13A1Q5TAT6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
COL13A1Q5TAT6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
COL13A1Q5TAT6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
COL13A1Q5TAT6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC33.71■■■□□ 2.99
COL13A1Q5TAT6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
COL13A1Q5TAT6 MIR3665-201ENST00000578708 105 ntBASIC33.71■■■□□ 2.99
COL13A1Q5TAT6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
COL13A1Q5TAT6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC33.7■■■□□ 2.99
COL13A1Q5TAT6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
COL13A1Q5TAT6 AC087741.3-201ENST00000624270 1347 ntBASIC33.69■■■□□ 2.98
COL13A1Q5TAT6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC33.68■■■□□ 2.98
COL13A1Q5TAT6 MIR4449-201ENST00000578365 66 ntBASIC33.68■■■□□ 2.98
COL13A1Q5TAT6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC33.67■■■□□ 2.98
COL13A1Q5TAT6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
COL13A1Q5TAT6 ZNRF2P2-203ENST00000454624 420 ntBASIC33.66■■■□□ 2.98
COL13A1Q5TAT6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC33.66■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms