Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.183e-19■■■■■ 82.9
LSM11P83369 TP53BP1-205ENST00000413546 3143 ntTSL 57.18□□□□□ -1.263e-19■■■■■ 82.9
LSM11P83369 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.97□□□□□ -1.293e-19■■■■■ 82.9
LSM11P83369 SNX13-204ENST00000444712 2018 ntTSL 514.49□□□□□ -0.097e-19■■■■■ 81
LSM11P83369 SNX13-208ENST00000482558 1139 ntTSL 213.64□□□□□ -0.237e-19■■■■■ 81
LSM11P83369 SNX13-202ENST00000409604 4146 ntTSL 1 (best) BASIC10.48□□□□□ -0.737e-19■■■■■ 81
LSM11P83369 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.037e-19■■■■■ 81
LSM11P83369 SNX13-201ENST00000409076 3818 ntTSL 28.03□□□□□ -1.127e-19■■■■■ 81
LSM11P83369 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.94□□□□□ -1.467e-19■■■■■ 81
LSM11P83369 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.19■□□□□ 0.341e-25■■■■■ 79.2
LSM11P83369 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.21e-25■■■■■ 79.2
LSM11P83369 KANSL1-223ENST00000639150 1815 ntTSL 515.3■□□□□ 0.041e-25■■■■■ 79.2
LSM11P83369 KANSL1-203ENST00000571698 2276 ntTSL 514.32□□□□□ -0.121e-25■■■■■ 79.2
LSM11P83369 KANSL1-229ENST00000639531 2731 ntTSL 511.87□□□□□ -0.511e-25■■■■■ 79.2
LSM11P83369 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC10.79□□□□□ -0.681e-25■■■■■ 79.2
LSM11P83369 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.711e-25■■■■■ 79.2
LSM11P83369 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.851e-25■■■■■ 79.2
LSM11P83369 KANSL1-217ENST00000638269 3365 ntTSL 59.61□□□□□ -0.871e-25■■■■■ 79.2
LSM11P83369 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.041e-25■■■■■ 79.2
LSM11P83369 KANSL1-226ENST00000639375 3392 ntTSL 57.42□□□□□ -1.221e-25■■■■■ 79.2
LSM11P83369 KANSL1-231ENST00000639853 1425 ntTSL 56.97□□□□□ -1.291e-25■■■■■ 79.2
LSM11P83369 KANSL1-213ENST00000576248 452 ntTSL 35.28□□□□□ -1.561e-25■■■■■ 79.2
LSM11P83369 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.382e-18■■■■■ 79.1
LSM11P83369 ZMYM4-203ENST00000457946 6003 ntTSL 54.75□□□□□ -1.652e-18■■■■■ 79.1
LSM11P83369 USP28-208ENST00000540438 3015 ntTSL 216.21■□□□□ 0.186e-18■■■■■ 77.1
LSM11P83369 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.44□□□□□ -0.16e-18■■■■■ 77.1
LSM11P83369 USP28-204ENST00000537642 732 ntTSL 312.87□□□□□ -0.356e-18■■■■■ 77.1
LSM11P83369 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.756e-18■■■■■ 77.1
LSM11P83369 USP28-202ENST00000535607 683 ntTSL 310.11□□□□□ -0.796e-18■■■■■ 77.1
LSM11P83369 USP28-207ENST00000538475 1081 ntTSL 39.69□□□□□ -0.866e-18■■■■■ 77.1
LSM11P83369 USP28-215ENST00000545608 733 ntTSL 58.97□□□□□ -0.976e-18■■■■■ 77.1
LSM11P83369 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC8.35□□□□□ -1.076e-18■■■■■ 77.1
LSM11P83369 USP28-210ENST00000542033 852 ntTSL 27.59□□□□□ -1.196e-18■■■■■ 77.1
LSM11P83369 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.17■□□□□ 0.826e-12■■■■■ 77.1
LSM11P83369 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.396e-12■■■■■ 77.1
LSM11P83369 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.12■□□□□ 0.336e-12■■■■■ 77.1
LSM11P83369 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.43□□□□□ -0.266e-12■■■■■ 77.1
LSM11P83369 USP48-202ENST00000374730 570 ntTSL 410.55□□□□□ -0.726e-12■■■■■ 77.1
LSM11P83369 LINC00243-201ENST00000399196 2052 ntTSL 2 BASIC8.82□□□□□ -13e-17■■■■■ 73.5
LSM11P83369 LINC00243-202ENST00000419357 264 ntTSL 38.01□□□□□ -1.133e-17■■■■■ 73.5
LSM11P83369 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.42e-14■■■■■ 72.7
LSM11P83369 BIRC6-209ENST00000471232 4226 ntTSL 25.82□□□□□ -1.482e-14■■■■■ 72.7
LSM11P83369 EZH2-210ENST00000498186 1876 ntTSL 222.72■■□□□ 1.232e-13■■■■■ 71.6
LSM11P83369 EZH2-207ENST00000483012 1491 ntTSL 222.58■■□□□ 1.22e-13■■■■■ 71.6
LSM11P83369 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.52■■□□□ 1.192e-13■■■■■ 71.6
LSM11P83369 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.042e-13■■■■■ 71.6
LSM11P83369 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.62e-13■■■■■ 71.6
LSM11P83369 EZH2-209ENST00000492143 3641 ntTSL 215.74■□□□□ 0.112e-13■■■■■ 71.6
LSM11P83369 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.572e-13■■■■■ 71.6
LSM11P83369 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC8.85□□□□□ -0.992e-13■■■■■ 71.6
LSM11P83369 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.262e-13■■■■■ 71.6
LSM11P83369 HIST1H3J-202ENST00000479986 522 ntTSL 219.2■□□□□ 0.663e-14■■■■■ 70.7
LSM11P83369 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.092e-10■■■■■ 69.8
LSM11P83369 PHC3-201ENST00000465896 538 ntTSL 510.65□□□□□ -0.79e-11■■■■■ 68.8
LSM11P83369 PHC3-210ENST00000484931 657 ntTSL 59.95□□□□□ -0.829e-11■■■■■ 68.8
LSM11P83369 PHC3-207ENST00000479467 987 ntTSL 29□□□□□ -0.979e-11■■■■■ 68.8
LSM11P83369 PHC3-206ENST00000475729 772 ntTSL 58.19□□□□□ -1.19e-11■■■■■ 68.8
LSM11P83369 PHC3-202ENST00000466189 580 ntTSL 38.19□□□□□ -1.19e-11■■■■■ 68.8
LSM11P83369 PHC3-204ENST00000472330 609 ntTSL 36.34□□□□□ -1.399e-11■■■■■ 68.8
LSM11P83369 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.96□□□□□ -1.469e-11■■■■■ 68.8
LSM11P83369 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.53□□□□□ -1.529e-11■■■■■ 68.8
LSM11P83369 PHC3-205ENST00000474275 2427 ntTSL 25.05□□□□□ -1.69e-11■■■■■ 68.8
LSM11P83369 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.869e-11■■■■■ 68.8
LSM11P83369 WWC2-207ENST00000508614 604 ntTSL 315.15■□□□□ 0.024e-10■■■■■ 68.4
LSM11P83369 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.354e-10■■■■■ 68.4
LSM11P83369 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC11.14□□□□□ -0.634e-10■■■■■ 68.4
LSM11P83369 WWC2-204ENST00000448232 6356 ntTSL 5 BASIC9.77□□□□□ -0.854e-10■■■■■ 68.4
LSM11P83369 LMBR1-209ENST00000434453 2229 ntTSL 523.52■■□□□ 1.361e-11■■■■■ 67.4
LSM11P83369 LMBR1-214ENST00000461469 560 ntTSL 320.45■□□□□ 0.861e-11■■■■■ 67.4
LSM11P83369 LMBR1-211ENST00000444719 762 ntTSL 319.38■□□□□ 0.691e-11■■■■■ 67.4
LSM11P83369 LMBR1-213ENST00000454132 2922 ntTSL 218.75■□□□□ 0.591e-11■■■■■ 67.4
LSM11P83369 LMBR1-217ENST00000485985 644 ntTSL 218.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-205ENST00000430278 523 ntTSL 418.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-207ENST00000433968 578 ntTSL 418.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-210ENST00000434503 930 ntTSL 518.08■□□□□ 0.481e-11■■■■■ 67.4
LSM11P83369 LMBR1-203ENST00000414218 451 ntTSL 517.84■□□□□ 0.451e-11■■■■■ 67.4
LSM11P83369 LMBR1-219ENST00000498034 478 ntTSL 317.61■□□□□ 0.411e-11■■■■■ 67.4
LSM11P83369 LMBR1-208ENST00000434278 678 ntTSL 517.51■□□□□ 0.391e-11■■■■■ 67.4
LSM11P83369 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.44□□□□□ -0.11e-11■■■■■ 67.4
LSM11P83369 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.461e-11■■■■■ 67.4
LSM11P83369 LMBR1-204ENST00000415428 3457 ntTSL 1 (best)5.5□□□□□ -1.531e-11■■■■■ 67.4
LSM11P83369 MTMR10-203ENST00000564787 631 ntTSL 516.07■□□□□ 0.163e-15■■■■■ 65.6
LSM11P83369 MTMR10-204ENST00000565728 1623 ntTSL 514.84□□□□□ -0.033e-15■■■■■ 65.6
LSM11P83369 MTMR10-207ENST00000567567 2833 ntTSL 210.36□□□□□ -0.753e-15■■■■■ 65.6
LSM11P83369 MTMR10-202ENST00000563714 2216 ntTSL 2 BASIC10.34□□□□□ -0.753e-15■■■■■ 65.6
LSM11P83369 MTMR10-209ENST00000568604 5679 ntTSL 1 (best)8.6□□□□□ -1.033e-15■■■■■ 65.6
LSM11P83369 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.093e-15■■■■■ 65.6
LSM11P83369 IGF2BP3-213ENST00000491719 800 ntTSL 517.98■□□□□ 0.472e-8■■■■■ 65.4
LSM11P83369 IGF2BP3-210ENST00000476938 500 ntTSL 215.68■□□□□ 0.12e-8■■■■■ 65.4
LSM11P83369 IGF2BP3-206ENST00000468005 2948 ntTSL 513.48□□□□□ -0.252e-8■■■■■ 65.4
LSM11P83369 TBC1D5-224ENST00000473612 330 ntTSL 211.78□□□□□ -0.522e-8■■■■■ 64.1
LSM11P83369 TBC1D5-225ENST00000480435 560 ntTSL 59.99□□□□□ -0.812e-8■■■■■ 64.1
LSM11P83369 TBC1D5-212ENST00000433533 471 ntTSL 38.86□□□□□ -0.992e-8■■■■■ 64.1
LSM11P83369 TBC1D5-230ENST00000507877 578 ntTSL 48.46□□□□□ -1.062e-8■■■■■ 64.1
LSM11P83369 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.27□□□□□ -1.082e-8■■■■■ 64.1
LSM11P83369 OXR1-203ENST00000435082 2023 ntTSL 219.03■□□□□ 0.641e-13■■■■■ 64.1
LSM11P83369 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.461e-13■■■■■ 64.1
LSM11P83369 OXR1-212ENST00000521592 993 ntTSL 5 BASIC10.34□□□□□ -0.751e-13■■■■■ 64.1
LSM11P83369 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.17□□□□□ -1.261e-13■■■■■ 64.1
LSM11P83369 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.85□□□□□ -1.471e-13■■■■■ 64.1
Retrieved 100 of 11,495 protein–RNA pairs in 44.6 ms