RNA–Protein interactions for RNA: ENST00000474275.5

PHC3-205, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 2,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-205ENST00000474275 AEBP2Q6ZN18 517 aaPredicted RBP11.89□□□□□ -0.51
PHC3-205ENST00000474275 CHIC1Q5VXU3 224 aa11.49□□□□□ -0.57
PHC3-205ENST00000474275 NISCHQ9Y2I1 1504 aa11.17□□□□□ -0.62
PHC3-205ENST00000474275 POTEDQ86YR6 584 aa11.1□□□□□ -0.63
PHC3-205ENST00000474275 SENP3Q9H4L4 574 aaPredicted RBP10.53□□□□□ -0.72
PHC3-205ENST00000474275 ABCC9O60706 1549 aa10.26□□□□□ -0.77
PHC3-205ENST00000474275 PHF23Q9BUL5 403 aaPredicted RBP10.25□□□□□ -0.77
PHC3-205ENST00000474275 CCDC180Q9P1Z9 1646 aa10.03□□□□□ -0.8
PHC3-205ENST00000474275 DNAJC5BQ9UF47 199 aa9.83□□□□□ -0.84
PHC3-205ENST00000474275 FOXD1Q16676 465 aa9.79□□□□□ -0.84
PHC3-205ENST00000474275 MSH5O43196 834 aa9.75□□□□□ -0.85
PHC3-205ENST00000474275 RB1CC1Q8TDY2 1594 aa9.63□□□□□ -0.87
PHC3-205ENST00000474275 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
PHC3-205ENST00000474275 DCAF8L2P0C7V8 631 aa9.54□□□□□ -0.88
PHC3-205ENST00000474275 PLPPR3Q6T4P5 718 aa9.53□□□□□ -0.88
PHC3-205ENST00000474275 NACADO15069 1562 aa9.53□□□□□ -0.88
PHC3-205ENST00000474275 UNC13AQ9UPW8 1703 aa9.47□□□□□ -0.89
PHC3-205ENST00000474275 BICRAQ9NZM4 1560 aa9.43□□□□□ -0.9
PHC3-205ENST00000474275 MYO15BQ96JP2 1530 aa9.34□□□□□ -0.91
PHC3-205ENST00000474275 CC2D2AQ9P2K1 1620 aa9.24□□□□□ -0.93
PHC3-205ENST00000474275 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
PHC3-205ENST00000474275 ZCCHC6Q5VYS8 1495 aaKnown RBP9.22□□□□□ -0.93
PHC3-205ENST00000474275 SCRIBQ14160 1630 aa9.19□□□□□ -0.94
PHC3-205ENST00000474275 DCAF1Q9Y4B6 1507 aa9.18□□□□□ -0.94
PHC3-205ENST00000474275 EIF4G1Q04637 1599 aaKnown RBP9.17□□□□□ -0.94
PHC3-205ENST00000474275 SHROOM4Q9ULL8 1493 aa9.16□□□□□ -0.94
PHC3-205ENST00000474275 ADRA2BP18089 450 aa9.07□□□□□ -0.96
PHC3-205ENST00000474275 DNAJC5Q9H3Z4 198 aa9.05□□□□□ -0.96
PHC3-205ENST00000474275 EHMT2Q96KQ7 1210 aa9.02□□□□□ -0.97
PHC3-205ENST00000474275 KCNA4P22459 653 aa8.96□□□□□ -0.97
PHC3-205ENST00000474275 PIAS4Q8N2W9 510 aaPredicted RBP8.93□□□□□ -0.98
PHC3-205ENST00000474275 PPP6R1Q9UPN7 881 aa8.92□□□□□ -0.98
PHC3-205ENST00000474275 CACNB1Q02641 598 aaPredicted RBP8.92□□□□□ -0.98
PHC3-205ENST00000474275 NCAPD3P42695 1498 aa8.83□□□□□ -1
PHC3-205ENST00000474275 CUX2O14529 1486 aa8.83□□□□□ -1
PHC3-205ENST00000474275 ERCC6Q03468 1493 aa8.81□□□□□ -1
PHC3-205ENST00000474275 ATAD2BQ9ULI0 1458 aa8.8□□□□□ -1
PHC3-205ENST00000474275 NESP48681 1621 aa8.8□□□□□ -1
PHC3-205ENST00000474275 SMARCA4P51532 1647 aa8.74□□□□□ -1.01
PHC3-205ENST00000474275 HMGXB3Q12766 1538 aa8.72□□□□□ -1.01
PHC3-205ENST00000474275 SMARCA2P51531 1590 aa8.71□□□□□ -1.01
PHC3-205ENST00000474275 BAZ1BQ9UIG0 1483 aaKnown RBP8.68□□□□□ -1.02
PHC3-205ENST00000474275 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
PHC3-205ENST00000474275 BAZ1AQ9NRL2 1556 aaPredicted RBP8.65□□□□□ -1.02
PHC3-205ENST00000474275 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
PHC3-205ENST00000474275 PEG3Q9GZU2 1588 aa8.64□□□□□ -1.03
PHC3-205ENST00000474275 KIF21AQ7Z4S6 1674 aa8.63□□□□□ -1.03
PHC3-205ENST00000474275 LAMC3Q9Y6N6 1575 aa8.63□□□□□ -1.03
PHC3-205ENST00000474275 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
PHC3-205ENST00000474275 TRIM41Q8WV44 630 aa8.6□□□□□ -1.03
PHC3-205ENST00000474275 PDS5BQ9NTI5 1447 aa8.58□□□□□ -1.04
PHC3-205ENST00000474275 CADPSQ9ULU8 1353 aa8.56□□□□□ -1.04
PHC3-205ENST00000474275 SLC4A1APQ9BWU0 796 aaKnown RBP8.55□□□□□ -1.04
PHC3-205ENST00000474275 WIZO95785 1651 aa8.53□□□□□ -1.04
PHC3-205ENST00000474275 MRC2Q9UBG0 1479 aa8.53□□□□□ -1.04
PHC3-205ENST00000474275 POTEHQ6S545 545 aa8.52□□□□□ -1.05
PHC3-205ENST00000474275 WDR62O43379 1518 aa8.51□□□□□ -1.05
PHC3-205ENST00000474275 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
PHC3-205ENST00000474275 SLC24A1O60721 1099 aa8.48□□□□□ -1.05
PHC3-205ENST00000474275 FANCD2Q9BXW9 1451 aa8.46□□□□□ -1.05
PHC3-205ENST00000474275 CEP164Q9UPV0 1460 aa8.46□□□□□ -1.06
PHC3-205ENST00000474275 PELP1Q8IZL8 1130 aaKnown RBP8.45□□□□□ -1.06
PHC3-205ENST00000474275 OSCARQ8IYS5 282 aa8.44□□□□□ -1.06
PHC3-205ENST00000474275 CFTRP13569 1480 aa8.44□□□□□ -1.06
PHC3-205ENST00000474275 URB2Q14146 1524 aaKnown RBP8.43□□□□□ -1.06
PHC3-205ENST00000474275 MYT1Q01538 1121 aa8.41□□□□□ -1.06
PHC3-205ENST00000474275 RSF1Q96T23 1441 aaPredicted RBP8.41□□□□□ -1.06
PHC3-205ENST00000474275 ZNF608Q9ULD9 1512 aaPredicted RBP8.37□□□□□ -1.07
PHC3-205ENST00000474275 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
PHC3-205ENST00000474275 RIMBP3CA6NJZ7 1639 aa8.35□□□□□ -1.07
PHC3-205ENST00000474275 RIMBP3BA6NNM3 1639 aa8.35□□□□□ -1.07
PHC3-205ENST00000474275 RIMBP3Q9UFD9 1639 aa8.35□□□□□ -1.07
PHC3-205ENST00000474275 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
PHC3-205ENST00000474275 NCBP3Q53F19 620 aaKnown RBP8.33□□□□□ -1.08
PHC3-205ENST00000474275 CCDC88BA6NC98 1476 aa8.31□□□□□ -1.08
PHC3-205ENST00000474275 ARHGEF11O15085 1522 aa8.31□□□□□ -1.08
PHC3-205ENST00000474275 IFT140Q96RY7 1462 aa8.29□□□□□ -1.08
PHC3-205ENST00000474275 ZBTB22O15209 634 aa8.29□□□□□ -1.08
PHC3-205ENST00000474275 CYB5RLQ6IPT4 315 aa8.29□□□□□ -1.08
PHC3-205ENST00000474275 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
PHC3-205ENST00000474275 PRDM2Q13029 1718 aa8.29□□□□□ -1.08
PHC3-205ENST00000474275 TTBK1Q5TCY1 1321 aaPredicted RBP8.28□□□□□ -1.08
PHC3-205ENST00000474275 AQRO60306 1485 aaKnown RBP eCLIP8.27□□□□□ -1.091e-7■■■■■ 32.3
PHC3-205ENST00000474275 EIF4G3O43432 1585 aaKnown RBP8.26□□□□□ -1.09
PHC3-205ENST00000474275 PRKCSHP14314 528 aaPredicted RBP8.25□□□□□ -1.09
PHC3-205ENST00000474275 TARBP1Q13395 1621 aaKnown RBP8.24□□□□□ -1.09
PHC3-205ENST00000474275 CHD1O14646 1710 aa8.23□□□□□ -1.09
PHC3-205ENST00000474275 ARAP1Q96P48 1450 aa8.23□□□□□ -1.09
PHC3-205ENST00000474275 FBLN2P98095 1184 aa8.22□□□□□ -1.09
PHC3-205ENST00000474275 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
PHC3-205ENST00000474275 TRHP20396 242 aaPredicted RBP8.22□□□□□ -1.09
PHC3-205ENST00000474275 RAD54L2Q9Y4B4 1467 aa8.21□□□□□ -1.1
PHC3-205ENST00000474275 ABCC8Q09428 1581 aa8.21□□□□□ -1.1
PHC3-205ENST00000474275 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
PHC3-205ENST00000474275 TDRD9Q8NDG6 1382 aaKnown RBP8.2□□□□□ -1.1
PHC3-205ENST00000474275 SOGA1O94964 1423 aa8.16□□□□□ -1.1
PHC3-205ENST00000474275 APLP2Q06481 763 aa8.15□□□□□ -1.1
PHC3-205ENST00000474275 DMRT2Q9Y5R5 561 aa8.15□□□□□ -1.1
PHC3-205ENST00000474275 SNAPC4Q5SXM2 1469 aa8.14□□□□□ -1.11
PHC3-205ENST00000474275 CLASP1Q7Z460 1538 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms